RNA–Protein interactions for RNA: ENST00000470687.1

UBXN4-206, Transcript of UBX domain protein 4, humanhuman

TSL 2

Gene UBXN4, Length 549 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-206ENST00000470687 USP48Q86UV5 1035 aa4.32□□□□□ -1.72
UBXN4-206ENST00000470687 SLITRK4Q8IW52 837 aa4.32□□□□□ -1.72
UBXN4-206ENST00000470687 GOLM1Q8NBJ4 401 aa4.32□□□□□ -1.72
UBXN4-206ENST00000470687 SYT8Q8NBV8 401 aa4.32□□□□□ -1.72
UBXN4-206ENST00000470687 PPP1R13LQ8WUF5 828 aa4.32□□□□□ -1.72
UBXN4-206ENST00000470687 GATAD2BQ8WXI9 593 aa4.32□□□□□ -1.72
UBXN4-206ENST00000470687 TMEM87BQ96K49 555 aa4.32□□□□□ -1.72
UBXN4-206ENST00000470687 LRRC3Q9BY71 257 aa4.32□□□□□ -1.72
UBXN4-206ENST00000470687 MRS2Q9HD23 443 aa4.32□□□□□ -1.72
UBXN4-206ENST00000470687 MROH2BQ7Z745 1585 aa4.31□□□□□ -1.72
UBXN4-206ENST00000470687 ZC3H12DA2A288 527 aaKnown RBP4.31□□□□□ -1.72
UBXN4-206ENST00000470687 NOTOA8MTQ0 251 aa4.31□□□□□ -1.72
UBXN4-206ENST00000470687 IRS4O14654 1257 aaPredicted RBP4.31□□□□□ -1.72
UBXN4-206ENST00000470687 N4BP3O15049 544 aa4.31□□□□□ -1.72
UBXN4-206ENST00000470687 TLR3O15455 904 aaKnown RBP4.31□□□□□ -1.72
UBXN4-206ENST00000470687 EFEMP2O95967 443 aa4.31□□□□□ -1.72
UBXN4-206ENST00000470687 TEKQ02763 1124 aa4.31□□□□□ -1.72
UBXN4-206ENST00000470687 DUSP4Q13115 394 aa4.31□□□□□ -1.72
UBXN4-206ENST00000470687 NLRX1Q86UT6 975 aa4.31□□□□□ -1.72
UBXN4-206ENST00000470687 FAM169BQ8N8A8 192 aa4.31□□□□□ -1.72
UBXN4-206ENST00000470687 RASGRP4Q8TDF6 673 aa4.31□□□□□ -1.72
UBXN4-206ENST00000470687 LINC01599Q8WXQ3 324 aa4.31□□□□□ -1.72
UBXN4-206ENST00000470687 SYTL4Q96C24 671 aaPredicted RBP4.31□□□□□ -1.72
UBXN4-206ENST00000470687 LUC7LQ9NQ29 371 aaKnown RBP4.31□□□□□ -1.72
UBXN4-206ENST00000470687 GINM1Q9NU53 330 aa4.31□□□□□ -1.72
UBXN4-206ENST00000470687 EPB41L3Q9Y2J2 1087 aaPredicted RBP4.31□□□□□ -1.72
UBXN4-206ENST00000470687 TACC3Q9Y6A5 838 aa4.31□□□□□ -1.72
UBXN4-206ENST00000470687 NESP48681 1621 aa4.31□□□□□ -1.72
UBXN4-206ENST00000470687 UPK3BL1B0FP48 263 aa4.3□□□□□ -1.72
UBXN4-206ENST00000470687 UPK3BL2E5RIL1 263 aa4.3□□□□□ -1.72
UBXN4-206ENST00000470687 PGRP06401 933 aa4.3□□□□□ -1.72
UBXN4-206ENST00000470687 FGRP09769 529 aa4.3□□□□□ -1.72
UBXN4-206ENST00000470687 INSRRP14616 1297 aa4.3□□□□□ -1.72
UBXN4-206ENST00000470687 SLC6A19Q695T7 634 aa4.3□□□□□ -1.72
UBXN4-206ENST00000470687 HS2ST1Q7LGA3 356 aa4.3□□□□□ -1.72
UBXN4-206ENST00000470687 SIRT2Q8IXJ6 389 aa4.3□□□□□ -1.72
UBXN4-206ENST00000470687 JARID2Q92833 1246 aaPredicted RBP4.3□□□□□ -1.72
UBXN4-206ENST00000470687 ACSF2Q96CM8 615 aaPredicted RBP4.3□□□□□ -1.72
UBXN4-206ENST00000470687 G6PC3Q9BUM1 346 aa4.3□□□□□ -1.72
UBXN4-206ENST00000470687 NT5C1AQ9BXI3 368 aa4.3□□□□□ -1.72
UBXN4-206ENST00000470687 TGIF2Q9GZN2 237 aa4.3□□□□□ -1.72
UBXN4-206ENST00000470687 CNTD2Q9H8S5 307 aa4.3□□□□□ -1.72
UBXN4-206ENST00000470687 BRMS1Q9HCU9 246 aa4.3□□□□□ -1.72
UBXN4-206ENST00000470687 SIRT5Q9NXA8 310 aa4.3□□□□□ -1.72
UBXN4-206ENST00000470687 KCNH3Q9ULD8 1083 aa4.3□□□□□ -1.72
UBXN4-206ENST00000470687 CEP131Q9UPN4 1083 aa4.3□□□□□ -1.72
UBXN4-206ENST00000470687 CFTRP13569 1480 aa4.3□□□□□ -1.72
UBXN4-206ENST00000470687 MRC2Q9UBG0 1479 aa4.3□□□□□ -1.72
UBXN4-206ENST00000470687 ABCC8Q09428 1581 aa4.29□□□□□ -1.72
UBXN4-206ENST00000470687 ACRP10323 421 aa4.29□□□□□ -1.72
UBXN4-206ENST00000470687 VIPR1P32241 457 aa4.29□□□□□ -1.72
UBXN4-206ENST00000470687 PLP2Q04941 152 aa4.29□□□□□ -1.72
UBXN4-206ENST00000470687 PUM1Q14671 1186 aaKnown RBP eCLIP4.29□□□□□ -1.72
UBXN4-206ENST00000470687 REC114Q7Z4M0 266 aa4.29□□□□□ -1.72
UBXN4-206ENST00000470687 FRMD5Q7Z6J6 570 aa4.29□□□□□ -1.72
UBXN4-206ENST00000470687 MCATQ8IVS2 390 aaKnown RBP4.29□□□□□ -1.72
UBXN4-206ENST00000470687 TMEFF1Q8IYR6 380 aa4.29□□□□□ -1.72
UBXN4-206ENST00000470687 GMLQ99445 158 aa4.29□□□□□ -1.72
UBXN4-206ENST00000470687 BDH2Q9BUT1 245 aa4.29□□□□□ -1.72
UBXN4-206ENST00000470687 ZNF281Q9Y2X9 895 aa4.29□□□□□ -1.72
UBXN4-206ENST00000470687 CHURC1-FNTBB4DL54 471 aa4.28□□□□□ -1.72
UBXN4-206ENST00000470687 GRIN3BO60391 1043 aa4.28□□□□□ -1.72
UBXN4-206ENST00000470687 ATF4P18848 351 aaPredicted RBP4.28□□□□□ -1.72
UBXN4-206ENST00000470687 ERCC5P28715 1186 aaPredicted RBP4.28□□□□□ -1.72
UBXN4-206ENST00000470687 SOX9P48436 509 aa4.28□□□□□ -1.72
UBXN4-206ENST00000470687 RPL6Q02878 288 aaKnown RBP4.28□□□□□ -1.72
UBXN4-206ENST00000470687 CNKSR3Q6P9H4 555 aa4.28□□□□□ -1.72
UBXN4-206ENST00000470687 RUFY4Q6ZNE9 571 aa4.28□□□□□ -1.72
UBXN4-206ENST00000470687 CCDC84Q86UT8 332 aaPredicted RBP4.28□□□□□ -1.72
UBXN4-206ENST00000470687 FAM129CQ86XR2 697 aa4.28□□□□□ -1.72
UBXN4-206ENST00000470687 MCF2L2Q86YR7 1114 aa4.28□□□□□ -1.72
UBXN4-206ENST00000470687 LINC01356Q8N9X3 169 aa4.28□□□□□ -1.72
UBXN4-206ENST00000470687 VWCEQ96DN2 955 aa4.28□□□□□ -1.72
UBXN4-206ENST00000470687 SPON2Q9BUD6 331 aa4.28□□□□□ -1.72
UBXN4-206ENST00000470687 MYRFQ9Y2G1 1151 aa4.28□□□□□ -1.72
UBXN4-206ENST00000470687 CEP164Q9UPV0 1460 aa4.28□□□□□ -1.72
UBXN4-206ENST00000470687 THOC2Q8NI27 1593 aaKnown RBP4.27□□□□□ -1.73
UBXN4-206ENST00000470687 WDR62O43379 1518 aa4.27□□□□□ -1.73
UBXN4-206ENST00000470687 FANCD2Q9BXW9 1451 aa4.27□□□□□ -1.73
UBXN4-206ENST00000470687 IGSF3O75054 1194 aa4.27□□□□□ -1.73
UBXN4-206ENST00000470687 LRRN2O75325 713 aa4.27□□□□□ -1.73
UBXN4-206ENST00000470687 USP2O75604 605 aaPredicted RBP4.27□□□□□ -1.73
UBXN4-206ENST00000470687 ATE1O95260 518 aa4.27□□□□□ -1.73
UBXN4-206ENST00000470687 CDR1P51861 262 aa4.27□□□□□ -1.73
UBXN4-206ENST00000470687 YBX1P67809 324 aaKnown RBP4.27□□□□□ -1.73
UBXN4-206ENST00000470687 HHIPL2Q6UWX4 724 aa4.27□□□□□ -1.73
UBXN4-206ENST00000470687 RELL1Q8IUW5 271 aa4.27□□□□□ -1.73
UBXN4-206ENST00000470687 MZB1Q8WU39 189 aa4.27□□□□□ -1.73
UBXN4-206ENST00000470687 CYB5D2Q8WUJ1 264 aa4.27□□□□□ -1.73
UBXN4-206ENST00000470687 RNF141Q8WVD5 230 aa4.27□□□□□ -1.73
UBXN4-206ENST00000470687 SHDQ96IW2 340 aa4.27□□□□□ -1.73
UBXN4-206ENST00000470687 EHMT1Q9H9B1 1298 aa4.27□□□□□ -1.73
UBXN4-206ENST00000470687 CRTAC1Q9NQ79 661 aa4.27□□□□□ -1.73
UBXN4-206ENST00000470687 ADAM30Q9UKF2 790 aa4.27□□□□□ -1.73
UBXN4-206ENST00000470687 PPT2Q9UMR5 302 aa4.27□□□□□ -1.73
UBXN4-206ENST00000470687 RSF1Q96T23 1441 aaPredicted RBP4.27□□□□□ -1.73
UBXN4-206ENST00000470687 SHISA3A0PJX4 238 aa4.26□□□□□ -1.73
UBXN4-206ENST00000470687 NRDCO43847 1150 aa4.26□□□□□ -1.73
UBXN4-206ENST00000470687 PRICKLE3O43900 615 aaPredicted RBP4.26□□□□□ -1.73
UBXN4-206ENST00000470687 SDHBP21912 280 aa4.26□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms