RNA–Protein interactions for RNA: ENST00000470652.1

COL9A1-206, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 5

Gene COL9A1, Length 531 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-206ENST00000470652 ZNF503-AS2A6NEH8 195 aa6.56□□□□□ -1.36
COL9A1-206ENST00000470652 KRTAP9-7A8MTY7 169 aa6.56□□□□□ -1.36
COL9A1-206ENST00000470652 PCBP3P57721 371 aaKnown RBP6.56□□□□□ -1.36
COL9A1-206ENST00000470652 PPP2R5EQ16537 467 aa6.56□□□□□ -1.36
COL9A1-206ENST00000470652 KCNMB1Q16558 191 aa6.56□□□□□ -1.36
COL9A1-206ENST00000470652 LINC00116Q8NCU8 138 aa6.56□□□□□ -1.36
COL9A1-206ENST00000470652 ADAMTS10Q9H324 1103 aa6.56□□□□□ -1.36
COL9A1-206ENST00000470652 C19orf73Q9NVV2 129 aa6.56□□□□□ -1.36
COL9A1-206ENST00000470652 LTBP3Q9NS15 1303 aa6.55□□□□□ -1.36
COL9A1-206ENST00000470652 CC2D2AQ9P2K1 1620 aa6.55□□□□□ -1.36
COL9A1-206ENST00000470652 SSBP05455 408 aaKnown RBP eCLIP6.55□□□□□ -1.36
COL9A1-206ENST00000470652 RAC2P15153 192 aa6.55□□□□□ -1.36
COL9A1-206ENST00000470652 TEKQ02763 1124 aa6.55□□□□□ -1.36
COL9A1-206ENST00000470652 ARID5AQ03989 594 aa6.55□□□□□ -1.36
COL9A1-206ENST00000470652 AXDND1Q5T1B0 1012 aaPredicted RBP6.55□□□□□ -1.36
COL9A1-206ENST00000470652 TDRD10Q5VZ19 366 aaKnown RBP6.55□□□□□ -1.36
COL9A1-206ENST00000470652 PPFIBP1Q86W92 1011 aa6.55□□□□□ -1.36
COL9A1-206ENST00000470652 ANAPC16Q96DE5 110 aa6.55□□□□□ -1.36
COL9A1-206ENST00000470652 TOX2Q96NM4 488 aa6.55□□□□□ -1.36
COL9A1-206ENST00000470652 TINF2Q9BSI4 451 aa6.55□□□□□ -1.36
COL9A1-206ENST00000470652 GFOD1Q9NXC2 390 aa6.55□□□□□ -1.36
COL9A1-206ENST00000470652 TCFL5Q9UL49 500 aa6.55□□□□□ -1.36
COL9A1-206ENST00000470652 SHOXO15266 292 aa6.54□□□□□ -1.36
COL9A1-206ENST00000470652 TP53P04637 393 aaPredicted RBP6.54□□□□□ -1.36
COL9A1-206ENST00000470652 ZGLP1P0C6A0 271 aa6.54□□□□□ -1.36
COL9A1-206ENST00000470652 CD247P20963 164 aa6.54□□□□□ -1.36
COL9A1-206ENST00000470652 CFPP27918 469 aa6.54□□□□□ -1.36
COL9A1-206ENST00000470652 HK2P52789 917 aa6.54□□□□□ -1.36
COL9A1-206ENST00000470652 DUSP4Q13115 394 aa6.54□□□□□ -1.36
COL9A1-206ENST00000470652 TCEAL1Q15170 157 aa6.54□□□□□ -1.36
COL9A1-206ENST00000470652 GNPTABQ3T906 1256 aa6.54□□□□□ -1.36
COL9A1-206ENST00000470652 NOL9Q5SY16 702 aaKnown RBP6.54□□□□□ -1.36
COL9A1-206ENST00000470652 DCAF15Q66K64 600 aa6.54□□□□□ -1.36
COL9A1-206ENST00000470652 OXR1Q8N573 874 aa6.54□□□□□ -1.36
COL9A1-206ENST00000470652 SLC43A3Q8NBI5 491 aa6.54□□□□□ -1.36
COL9A1-206ENST00000470652 PDZD8Q8NEN9 1154 aa6.54□□□□□ -1.36
COL9A1-206ENST00000470652 LIN37Q96GY3 246 aaPredicted RBP6.54□□□□□ -1.36
COL9A1-206ENST00000470652 BUD13Q9BRD0 619 aaKnown RBP eCLIP6.54□□□□□ -1.36
COL9A1-206ENST00000470652 DSCC1Q9BVC3 393 aa6.54□□□□□ -1.36
COL9A1-206ENST00000470652 ZNF281Q9Y2X9 895 aa6.54□□□□□ -1.36
COL9A1-206ENST00000470652 SYPP08247 313 aa6.53□□□□□ -1.36
COL9A1-206ENST00000470652 ENDOUP21128 410 aaKnown RBP6.53□□□□□ -1.36
COL9A1-206ENST00000470652 SLC7A5Q01650 507 aa6.53□□□□□ -1.36
COL9A1-206ENST00000470652 SPPL2CQ8IUH8 684 aa6.53□□□□□ -1.36
COL9A1-206ENST00000470652 CILP2Q8IUL8 1156 aa6.53□□□□□ -1.36
COL9A1-206ENST00000470652 FAM169BQ8N8A8 192 aa6.53□□□□□ -1.36
COL9A1-206ENST00000470652 ZSCAN18Q8TBC5 510 aaPredicted RBP6.53□□□□□ -1.36
COL9A1-206ENST00000470652 KIRREL1Q96J84 757 aa6.53□□□□□ -1.36
COL9A1-206ENST00000470652 FOXP3Q9BZS1 431 aa6.53□□□□□ -1.36
COL9A1-206ENST00000470652 GP6Q9HCN6 339 aa6.53□□□□□ -1.36
COL9A1-206ENST00000470652 FAM86C1Q9NVL1 165 aa6.53□□□□□ -1.36
COL9A1-206ENST00000470652 A0A087WZG4 1122 aa6.52□□□□□ -1.37
COL9A1-206ENST00000470652 MEIS1O00470 390 aa6.52□□□□□ -1.37
COL9A1-206ENST00000470652 HPXP02790 462 aa6.52□□□□□ -1.37
COL9A1-206ENST00000470652 GSNP06396 782 aa6.52□□□□□ -1.37
COL9A1-206ENST00000470652 ITGA4P13612 1032 aa6.52□□□□□ -1.37
COL9A1-206ENST00000470652 RPL10P27635 214 aaKnown RBP6.52□□□□□ -1.37
COL9A1-206ENST00000470652 BMP8BP34820 402 aa6.52□□□□□ -1.37
COL9A1-206ENST00000470652 CHRNEQ04844 493 aa6.52□□□□□ -1.37
COL9A1-206ENST00000470652 TNNI3KQ59H18 835 aa6.52□□□□□ -1.37
COL9A1-206ENST00000470652 MYLIPQ8WY64 445 aa6.52□□□□□ -1.37
COL9A1-206ENST00000470652 HAUS7Q99871 368 aa6.52□□□□□ -1.37
COL9A1-206ENST00000470652 PCDHB10Q9UN67 800 aa6.52□□□□□ -1.37
COL9A1-206ENST00000470652 MINPP1Q9UNW1 487 aa6.52□□□□□ -1.37
COL9A1-206ENST00000470652 ZNF451Q9Y4E5 1061 aa6.52□□□□□ -1.37
COL9A1-206ENST00000470652 FHOD1Q9Y613 1164 aa6.52□□□□□ -1.37
COL9A1-206ENST00000470652 MRVI1Q9Y6F6 885 aa6.52□□□□□ -1.37
COL9A1-206ENST00000470652 RSF1Q96T23 1441 aaPredicted RBP6.51□□□□□ -1.37
COL9A1-206ENST00000470652 FITM1A5D6W6 292 aa6.51□□□□□ -1.37
COL9A1-206ENST00000470652 GLI1P08151 1106 aa6.51□□□□□ -1.37
COL9A1-206ENST00000470652 DNAJA1P31689 397 aaKnown RBP6.51□□□□□ -1.37
COL9A1-206ENST00000470652 CTSKP43235 329 aa6.51□□□□□ -1.37
COL9A1-206ENST00000470652 ZNF445P59923 1031 aa6.51□□□□□ -1.37
COL9A1-206ENST00000470652 NR0B2Q15466 257 aa6.51□□□□□ -1.37
COL9A1-206ENST00000470652 TMEM67Q5HYA8 995 aa6.51□□□□□ -1.37
COL9A1-206ENST00000470652 FYB2Q5VWT5 728 aa6.51□□□□□ -1.37
COL9A1-206ENST00000470652 CWF19L1Q69YN2 538 aaKnown RBP6.51□□□□□ -1.37
COL9A1-206ENST00000470652 HEATR6Q6AI08 1181 aaKnown RBP6.51□□□□□ -1.37
COL9A1-206ENST00000470652 LILRA6Q6PI73 481 aa6.51□□□□□ -1.37
COL9A1-206ENST00000470652 SYDE1Q6ZW31 735 aaPredicted RBP6.51□□□□□ -1.37
COL9A1-206ENST00000470652 WAPLQ7Z5K2 1190 aa6.51□□□□□ -1.37
COL9A1-206ENST00000470652 ANKLE2Q86XL3 938 aa6.51□□□□□ -1.37
COL9A1-206ENST00000470652 LRRC56Q8IYG6 542 aaPredicted RBP6.51□□□□□ -1.37
COL9A1-206ENST00000470652 ANKS4BQ8N8V4 417 aa6.51□□□□□ -1.37
COL9A1-206ENST00000470652 ABHD4Q8TB40 342 aa6.51□□□□□ -1.37
COL9A1-206ENST00000470652 LINC01599Q8WXQ3 324 aa6.51□□□□□ -1.37
COL9A1-206ENST00000470652 PPP1R16BQ96T49 567 aa6.51□□□□□ -1.37
COL9A1-206ENST00000470652 GMLQ99445 158 aa6.51□□□□□ -1.37
COL9A1-206ENST00000470652 ZMYM5Q9UJ78 669 aa6.51□□□□□ -1.37
COL9A1-206ENST00000470652 BAZ1AQ9NRL2 1556 aaPredicted RBP6.51□□□□□ -1.37
COL9A1-206ENST00000470652 TMEM82A0PJX8 343 aa6.5□□□□□ -1.37
COL9A1-206ENST00000470652 CBFA2T2O43439 604 aa6.5□□□□□ -1.37
COL9A1-206ENST00000470652 ZNF205O95201 554 aa6.5□□□□□ -1.37
COL9A1-206ENST00000470652 FGRP09769 529 aa6.5□□□□□ -1.37
COL9A1-206ENST00000470652 VAV1P15498 845 aa6.5□□□□□ -1.37
COL9A1-206ENST00000470652 ERVFC1P60507 584 aa6.5□□□□□ -1.37
COL9A1-206ENST00000470652 ZC3H6P61129 1189 aaKnown RBP6.5□□□□□ -1.37
COL9A1-206ENST00000470652 VHLLQ6RSH7 139 aa6.5□□□□□ -1.37
COL9A1-206ENST00000470652 MPZL3Q6UWV2 235 aa6.5□□□□□ -1.37
COL9A1-206ENST00000470652 LILRA2Q8N149 483 aa6.5□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms