RNA–Protein interactions for RNA: ENST00000470247.1

SREBF1-209, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 5

Gene SREBF1, Length 374 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-209ENST00000470247 USP17L13C9JLJ4 530 aa13.07□□□□□ -0.32
SREBF1-209ENST00000470247 USP17L11C9JVI0 530 aa13.07□□□□□ -0.32
SREBF1-209ENST00000470247 USP17L18D6R9N7 530 aa13.07□□□□□ -0.32
SREBF1-209ENST00000470247 USP17L22D6RA61 530 aa13.07□□□□□ -0.32
SREBF1-209ENST00000470247 USP17L17D6RBQ6 530 aa13.07□□□□□ -0.32
SREBF1-209ENST00000470247 USP17L19D6RCP7 530 aa13.07□□□□□ -0.32
SREBF1-209ENST00000470247 USP17L20D6RJB6 530 aa13.07□□□□□ -0.32
SREBF1-209ENST00000470247 CPLX1O14810 134 aa13.07□□□□□ -0.32
SREBF1-209ENST00000470247 CETPP11597 493 aa13.07□□□□□ -0.32
SREBF1-209ENST00000470247 USP17L24Q0WX57 530 aa13.07□□□□□ -0.32
SREBF1-209ENST00000470247 SYDE2Q5VT97 1194 aa13.07□□□□□ -0.32
SREBF1-209ENST00000470247 GADL1Q6ZQY3 521 aa13.07□□□□□ -0.32
SREBF1-209ENST00000470247 FASTKD5Q7L8L6 764 aaKnown RBP13.07□□□□□ -0.32
SREBF1-209ENST00000470247 CHURC1Q8WUH1 139 aa13.07□□□□□ -0.32
SREBF1-209ENST00000470247 CCDC102AQ96A19 550 aa13.07□□□□□ -0.32
SREBF1-209ENST00000470247 SHISA4Q96DD7 197 aa13.07□□□□□ -0.32
SREBF1-209ENST00000470247 FEM1BQ9UK73 627 aa13.07□□□□□ -0.32
SREBF1-209ENST00000470247 PRR12Q9ULL5 1215 aa13.07□□□□□ -0.32
SREBF1-209ENST00000470247 ADAMTS5Q9UNA0 930 aa13.07□□□□□ -0.32
SREBF1-209ENST00000470247 AGTPBP1Q9UPW5 1226 aa13.07□□□□□ -0.32
SREBF1-209ENST00000470247 RLFQ13129 1914 aa13.06□□□□□ -0.32
SREBF1-209ENST00000470247 CCL15-CCL14A0A0B4J2E2 113 aa13.06□□□□□ -0.32
SREBF1-209ENST00000470247 hCG_1642624A0A1W2PR95 340 aa13.06□□□□□ -0.32
SREBF1-209ENST00000470247 BTBD19C9JJ37 291 aa13.06□□□□□ -0.32
SREBF1-209ENST00000470247 STAT2P52630 851 aa13.06□□□□□ -0.32
SREBF1-209ENST00000470247 SSRP1Q08945 709 aaKnown RBP13.06□□□□□ -0.32
SREBF1-209ENST00000470247 CCL15Q16663 113 aa13.06□□□□□ -0.32
SREBF1-209ENST00000470247 CYP4F22Q6NT55 531 aa13.06□□□□□ -0.32
SREBF1-209ENST00000470247 FAM160B2Q86V87 743 aa13.06□□□□□ -0.32
SREBF1-209ENST00000470247 SPRYD3Q8NCJ5 442 aa13.06□□□□□ -0.32
SREBF1-209ENST00000470247 DDX11Q96FC9 970 aa13.06□□□□□ -0.32
SREBF1-209ENST00000470247 AIFM3Q96NN9 605 aa13.06□□□□□ -0.32
SREBF1-209ENST00000470247 PIGSQ96S52 555 aa13.06□□□□□ -0.32
SREBF1-209ENST00000470247 SLF1Q9BQI6 1058 aa13.06□□□□□ -0.32
SREBF1-209ENST00000470247 SLC26A6Q9BXS9 759 aa13.06□□□□□ -0.32
SREBF1-209ENST00000470247 RNF26Q9BY78 433 aaPredicted RBP13.06□□□□□ -0.32
SREBF1-209ENST00000470247 VAT1LQ9HCJ6 419 aa13.06□□□□□ -0.32
SREBF1-209ENST00000470247 ORC3Q9UBD5 711 aaPredicted RBP13.06□□□□□ -0.32
SREBF1-209ENST00000470247 PPP1R9AQ9ULJ8 1098 aa13.06□□□□□ -0.32
SREBF1-209ENST00000470247 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.06□□□□□ -0.32
SREBF1-209ENST00000470247 STK36Q9NRP7 1315 aa13.06□□□□□ -0.32
SREBF1-209ENST00000470247 LOC285556D6RIA3 1793 aa13.05□□□□□ -0.32
SREBF1-209ENST00000470247 PPP1R11O60927 126 aaPredicted RBP13.05□□□□□ -0.32
SREBF1-209ENST00000470247 FLOT1O75955 427 aa13.05□□□□□ -0.32
SREBF1-209ENST00000470247 CDKL5O76039 1030 aa13.05□□□□□ -0.32
SREBF1-209ENST00000470247 GJB2P29033 226 aa13.05□□□□□ -0.32
SREBF1-209ENST00000470247 DSG3P32926 999 aa13.05□□□□□ -0.32
SREBF1-209ENST00000470247 DDIT3P35638 169 aa13.05□□□□□ -0.32
SREBF1-209ENST00000470247 SNAP25P60880 206 aa13.05□□□□□ -0.32
SREBF1-209ENST00000470247 HTRA3P83110 453 aa13.05□□□□□ -0.32
SREBF1-209ENST00000470247 COG2Q14746 738 aa13.05□□□□□ -0.32
SREBF1-209ENST00000470247 DEFB115Q30KQ5 88 aa13.05□□□□□ -0.32
SREBF1-209ENST00000470247 CPLX2Q6PUV4 134 aaKnown RBP13.05□□□□□ -0.32
SREBF1-209ENST00000470247 FAM43AQ8N2R8 423 aa13.05□□□□□ -0.32
SREBF1-209ENST00000470247 PRPF38AQ8NAV1 312 aaKnown RBP13.05□□□□□ -0.32
SREBF1-209ENST00000470247 REPS2Q8NFH8 660 aa13.05□□□□□ -0.32
SREBF1-209ENST00000470247 P2RX7Q99572 595 aaKnown RBP13.05□□□□□ -0.32
SREBF1-209ENST00000470247 TANGO6Q9C0B7 1094 aa13.05□□□□□ -0.32
SREBF1-209ENST00000470247 ASCC2Q9H1I8 757 aaPredicted RBP13.05□□□□□ -0.32
SREBF1-209ENST00000470247 RANBP17Q9H2T7 1088 aaKnown RBP13.05□□□□□ -0.32
SREBF1-209ENST00000470247 SMC3Q9UQE7 1217 aa13.05□□□□□ -0.32
SREBF1-209ENST00000470247 MANSC4A6NHS7 340 aaPredicted RBP13.04□□□□□ -0.32
SREBF1-209ENST00000470247 SPDYE16A6NNV3 312 aaPredicted RBP13.04□□□□□ -0.32
SREBF1-209ENST00000470247 DEXIO95424 95 aa13.04□□□□□ -0.32
SREBF1-209ENST00000470247 HMGN5P82970 282 aaKnown RBP13.04□□□□□ -0.32
SREBF1-209ENST00000470247 PFKFB3Q16875 520 aaPredicted RBP13.04□□□□□ -0.32
SREBF1-209ENST00000470247 ANKRD23Q86SG2 305 aa13.04□□□□□ -0.32
SREBF1-209ENST00000470247 PIBF1Q8WXW3 757 aa13.04□□□□□ -0.32
SREBF1-209ENST00000470247 KIFC2Q96AC6 838 aa13.04□□□□□ -0.32
SREBF1-209ENST00000470247 ATG4CQ96DT6 458 aa13.04□□□□□ -0.32
SREBF1-209ENST00000470247 ISY1Q9ULR0 285 aaKnown RBP13.04□□□□□ -0.32
SREBF1-209ENST00000470247 SLC45A1Q9Y2W3 748 aa13.04□□□□□ -0.32
SREBF1-209ENST00000470247 ZNF536O15090 1300 aa13.04□□□□□ -0.32
SREBF1-209ENST00000470247 MYPNQ86TC9 1320 aa13.04□□□□□ -0.32
SREBF1-209ENST00000470247 PNMA6FA0A0J9YX94 578 aa13.03□□□□□ -0.32
SREBF1-209ENST00000470247 IGF2BP3O00425 579 aaKnown RBP eCLIP13.03□□□□□ -0.32
SREBF1-209ENST00000470247 VWA5AO00534 786 aa13.03□□□□□ -0.32
SREBF1-209ENST00000470247 ZBTB5O15062 677 aa13.03□□□□□ -0.32
SREBF1-209ENST00000470247 TM4SF4P48230 202 aa13.03□□□□□ -0.32
SREBF1-209ENST00000470247 KIF23Q02241 960 aaPredicted RBP13.03□□□□□ -0.32
SREBF1-209ENST00000470247 CDC37Q16543 378 aaPredicted RBP13.03□□□□□ -0.32
SREBF1-209ENST00000470247 QRICH1Q2TAL8 776 aa13.03□□□□□ -0.32
SREBF1-209ENST00000470247 TYW1BQ6NUM6 668 aa13.03□□□□□ -0.32
SREBF1-209ENST00000470247 LBX2Q6XYB7 198 aa13.03□□□□□ -0.32
SREBF1-209ENST00000470247 RRP36Q96EU6 259 aaKnown RBP13.03□□□□□ -0.32
SREBF1-209ENST00000470247 CAPNS2Q96L46 248 aa13.03□□□□□ -0.32
SREBF1-209ENST00000470247 SLC38A10Q9HBR0 1119 aa13.03□□□□□ -0.32
SREBF1-209ENST00000470247 GJB4Q9NTQ9 266 aa13.03□□□□□ -0.32
SREBF1-209ENST00000470247 HOXC10Q9NYD6 342 aa13.03□□□□□ -0.32
SREBF1-209ENST00000470247 PDHXO00330 501 aa13.02□□□□□ -0.33
SREBF1-209ENST00000470247 AOC2O75106 756 aa13.02□□□□□ -0.33
SREBF1-209ENST00000470247 CNMDO75829 334 aa13.02□□□□□ -0.33
SREBF1-209ENST00000470247 SCG2P13521 617 aa13.02□□□□□ -0.33
SREBF1-209ENST00000470247 TAL1P17542 331 aaPredicted RBP13.02□□□□□ -0.33
SREBF1-209ENST00000470247 INHBEP58166 350 aa13.02□□□□□ -0.33
SREBF1-209ENST00000470247 IKQ13123 557 aaPredicted RBP13.02□□□□□ -0.33
SREBF1-209ENST00000470247 WWC2Q6AWC2 1192 aa13.02□□□□□ -0.33
SREBF1-209ENST00000470247 HOMER1Q86YM7 354 aa13.02□□□□□ -0.33
SREBF1-209ENST00000470247 TRIM22Q8IYM9 498 aa13.02□□□□□ -0.33
SREBF1-209ENST00000470247 ALG1Q9BT22 464 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms