RNA–Protein interactions for RNA: ENST00000470197.5

GCFC2-205, Transcript of GC-rich sequence DNA-binding factor 2, humanhuman

TSL 1 (best)

Gene GCFC2, Length 3,648 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCFC2-205ENST00000470197 MRGPRX3Q96LB0 322 aa6.14□□□□□ -1.43
GCFC2-205ENST00000470197 EPN3Q9H201 632 aa6.14□□□□□ -1.43
GCFC2-205ENST00000470197 SPTLC3Q9NUV7 552 aa6.14□□□□□ -1.43
GCFC2-205ENST00000470197 LRP2BPQ9P2M1 347 aa6.14□□□□□ -1.43
GCFC2-205ENST00000470197 ADGRL1O94910 1474 aa6.14□□□□□ -1.43
GCFC2-205ENST00000470197 PLIN1O60240 522 aa6.13□□□□□ -1.43
GCFC2-205ENST00000470197 GLRX3O76003 335 aaKnown RBP6.13□□□□□ -1.43
GCFC2-205ENST00000470197 PF4V1P10720 104 aa6.13□□□□□ -1.43
GCFC2-205ENST00000470197 FGFR1P11362 822 aa6.13□□□□□ -1.43
GCFC2-205ENST00000470197 TMEM145Q8NBT3 493 aa6.13□□□□□ -1.43
GCFC2-205ENST00000470197 SAMM50Q9Y512 469 aa6.13□□□□□ -1.43
GCFC2-205ENST00000470197 MYL3P08590 195 aa6.13□□□□□ -1.43
GCFC2-205ENST00000470197 MYBL2P10244 700 aa6.13□□□□□ -1.43
GCFC2-205ENST00000470197 PMS1P54277 932 aaKnown RBP6.13□□□□□ -1.43
GCFC2-205ENST00000470197 VPS72Q15906 364 aa6.13□□□□□ -1.43
GCFC2-205ENST00000470197 PASD1Q8IV76 773 aa6.13□□□□□ -1.43
GCFC2-205ENST00000470197 TEX2Q8IWB9 1127 aa6.13□□□□□ -1.43
GCFC2-205ENST00000470197 CDAN1Q8IWY9 1227 aa6.13□□□□□ -1.43
GCFC2-205ENST00000470197 ZNF837Q96EG3 531 aaPredicted RBP6.13□□□□□ -1.43
GCFC2-205ENST00000470197 COL17A1Q9UMD9 1497 aaPredicted RBP6.13□□□□□ -1.43
GCFC2-205ENST00000470197 ANKRD34BA5PLL1 514 aa6.13□□□□□ -1.43
GCFC2-205ENST00000470197 SMNDC1O75940 238 aaKnown RBP eCLIP6.13□□□□□ -1.43
GCFC2-205ENST00000470197 ASGR2P07307 311 aa6.13□□□□□ -1.43
GCFC2-205ENST00000470197 LMOD3Q0VAK6 560 aa6.13□□□□□ -1.43
GCFC2-205ENST00000470197 HSP90AA2PQ14568 343 aaPredicted RBP6.13□□□□□ -1.43
GCFC2-205ENST00000470197 GRIK5Q16478 980 aa6.13□□□□□ -1.43
GCFC2-205ENST00000470197 LONRF3Q496Y0 759 aa6.13□□□□□ -1.43
GCFC2-205ENST00000470197 SARGQ9BW04 601 aa6.13□□□□□ -1.43
GCFC2-205ENST00000470197 SMOC1Q9H4F8 434 aa6.13□□□□□ -1.43
GCFC2-205ENST00000470197 HCSTQ9UBK5 93 aa6.13□□□□□ -1.43
GCFC2-205ENST00000470197 RAPGEF2Q9Y4G8 1499 aa6.13□□□□□ -1.43
GCFC2-205ENST00000470197 RFPL1O75677 317 aa6.12□□□□□ -1.43
GCFC2-205ENST00000470197 ZC3H12AQ5D1E8 599 aaKnown RBP6.12□□□□□ -1.43
GCFC2-205ENST00000470197 CDCA2Q69YH5 1023 aaPredicted RBP6.12□□□□□ -1.43
GCFC2-205ENST00000470197 XRRA1Q6P2D8 792 aa6.12□□□□□ -1.43
GCFC2-205ENST00000470197 MORC1Q86VD1 984 aa6.12□□□□□ -1.43
GCFC2-205ENST00000470197 TTC1Q99614 292 aa6.12□□□□□ -1.43
GCFC2-205ENST00000470197 PRDM10Q9NQV6 1147 aa6.12□□□□□ -1.43
GCFC2-205ENST00000470197 BCCIPQ9P287 314 aaKnown RBP eCLIP6.12□□□□□ -1.43
GCFC2-205ENST00000470197 COQ6Q9Y2Z9 468 aa6.12□□□□□ -1.43
GCFC2-205ENST00000470197 SLC12A7Q9Y666 1083 aa6.12□□□□□ -1.43
GCFC2-205ENST00000470197 BIVM-ERCC5R4GMW8 1640 aa6.12□□□□□ -1.43
GCFC2-205ENST00000470197 IQCA1LA6NCM1 817 aa6.12□□□□□ -1.43
GCFC2-205ENST00000470197 ADAM11O75078 769 aa6.12□□□□□ -1.43
GCFC2-205ENST00000470197 SRGNP10124 158 aa6.12□□□□□ -1.43
GCFC2-205ENST00000470197 TRIM27P14373 513 aa6.12□□□□□ -1.43
GCFC2-205ENST00000470197 SNW1Q13573 536 aaKnown RBP6.12□□□□□ -1.43
GCFC2-205ENST00000470197 CFAP100Q494V2 611 aa6.12□□□□□ -1.43
GCFC2-205ENST00000470197 HSP90AB4PQ58FF6 505 aa6.12□□□□□ -1.43
GCFC2-205ENST00000470197 COL23A1Q86Y22 540 aaPredicted RBP6.12□□□□□ -1.43
GCFC2-205ENST00000470197 PJA1Q8NG27 643 aa6.12□□□□□ -1.43
GCFC2-205ENST00000470197 XAGE3Q8WTP9 111 aa6.12□□□□□ -1.43
GCFC2-205ENST00000470197 NUDT8Q8WV74 236 aa6.12□□□□□ -1.43
GCFC2-205ENST00000470197 MAP3K20Q9NYL2 800 aaKnown RBP6.12□□□□□ -1.43
GCFC2-205ENST00000470197 LINC01387J3KSC0 135 aa6.12□□□□□ -1.43
GCFC2-205ENST00000470197 NBNO60934 754 aa6.12□□□□□ -1.43
GCFC2-205ENST00000470197 H2AFYO75367 372 aaKnown RBP6.12□□□□□ -1.43
GCFC2-205ENST00000470197 GRIK1P39086 918 aa6.12□□□□□ -1.43
GCFC2-205ENST00000470197 DSG1Q02413 1049 aa6.12□□□□□ -1.43
GCFC2-205ENST00000470197 ACBD5Q5T8D3 534 aaPredicted RBP6.12□□□□□ -1.43
GCFC2-205ENST00000470197 FUBP3Q96I24 572 aaKnown RBP eCLIP6.12□□□□□ -1.43
GCFC2-205ENST00000470197 DACH1Q9UI36 760 aa6.12□□□□□ -1.43
GCFC2-205ENST00000470197 SLC6A14Q9UN76 642 aa6.12□□□□□ -1.43
GCFC2-205ENST00000470197 PCDHA8Q9Y5H6 950 aa6.12□□□□□ -1.43
GCFC2-205ENST00000470197 DIP2BQ9P265 1576 aa6.12□□□□□ -1.43
GCFC2-205ENST00000470197 SHROOM2Q13796 1616 aa6.12□□□□□ -1.43
GCFC2-205ENST00000470197 TRAF5O00463 557 aa6.11□□□□□ -1.43
GCFC2-205ENST00000470197 NRDCO43847 1150 aa6.11□□□□□ -1.43
GCFC2-205ENST00000470197 FBXO21O94952 628 aa6.11□□□□□ -1.43
GCFC2-205ENST00000470197 ZRANB2O95218 330 aaKnown RBP eCLIP6.11□□□□□ -1.43
GCFC2-205ENST00000470197 DGKGP49619 791 aa6.11□□□□□ -1.43
GCFC2-205ENST00000470197 ZNF267Q14586 743 aaPredicted RBP6.11□□□□□ -1.43
GCFC2-205ENST00000470197 C8orf86Q6ZUL3 223 aa6.11□□□□□ -1.43
GCFC2-205ENST00000470197 MCATQ8IVS2 390 aaKnown RBP6.11□□□□□ -1.43
GCFC2-205ENST00000470197 SLFN12Q8IYM2 578 aa6.11□□□□□ -1.43
GCFC2-205ENST00000470197 PHACTR4Q8IZ21 702 aa6.11□□□□□ -1.43
GCFC2-205ENST00000470197 FBXO41Q8TF61 875 aa6.11□□□□□ -1.43
GCFC2-205ENST00000470197 RUSC2Q8N2Y8 1516 aa6.11□□□□□ -1.43
GCFC2-205ENST00000470197 FGFR3P22607 806 aa6.11□□□□□ -1.43
GCFC2-205ENST00000470197 COBLL1Q53SF7 1204 aa6.11□□□□□ -1.43
GCFC2-205ENST00000470197 FAM13CQ8NE31 585 aa6.11□□□□□ -1.43
GCFC2-205ENST00000470197 KLHDC7BQ96G42 594 aa6.11□□□□□ -1.43
GCFC2-205ENST00000470197 PUS7LQ9H0K6 701 aaKnown RBP6.11□□□□□ -1.43
GCFC2-205ENST00000470197 CCDC163A0A0D9SF12 145 aa6.11□□□□□ -1.43
GCFC2-205ENST00000470197 PYGMP11217 842 aa6.11□□□□□ -1.43
GCFC2-205ENST00000470197 AFF1P51825 1210 aaKnown RBP6.11□□□□□ -1.43
GCFC2-205ENST00000470197 SUMO1P63165 101 aaKnown RBP6.11□□□□□ -1.43
GCFC2-205ENST00000470197 HDAC1Q13547 482 aaPredicted RBP6.11□□□□□ -1.43
GCFC2-205ENST00000470197 GFOD2Q3B7J2 385 aa6.11□□□□□ -1.43
GCFC2-205ENST00000470197 CLRN3Q8NCR9 226 aa6.11□□□□□ -1.43
GCFC2-205ENST00000470197 SMC1BQ8NDV3 1235 aa6.11□□□□□ -1.43
GCFC2-205ENST00000470197 GPR101Q96P66 508 aaPredicted RBP6.11□□□□□ -1.43
GCFC2-205ENST00000470197 MDFIQ99750 246 aa6.11□□□□□ -1.43
GCFC2-205ENST00000470197 WDR18Q9BV38 432 aa6.11□□□□□ -1.43
GCFC2-205ENST00000470197 ADCY10Q96PN6 1610 aa6.1□□□□□ -1.43
GCFC2-205ENST00000470197 SLC35F4A4IF30 521 aa6.1□□□□□ -1.43
GCFC2-205ENST00000470197 HSPA2P54652 639 aa6.1□□□□□ -1.43
GCFC2-205ENST00000470197 GRAMD1BQ3KR37 738 aa6.1□□□□□ -1.43
GCFC2-205ENST00000470197 FIGNL1Q6PIW4 674 aa6.1□□□□□ -1.43
GCFC2-205ENST00000470197 GALNT11Q8NCW6 608 aa6.1□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms