RNA–Protein interactions for RNA: ENST00000470191.5

CCDC171-204, Transcript of coiled-coil domain containing 171, humanhuman

TSL 1 (best)

Gene CCDC171, Length 838 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-204ENST00000470191 ATXN2LQ8WWM7 1075 aaKnown RBP11.04□□□□□ -0.64
CCDC171-204ENST00000470191 FAM122AQ96E09 287 aa11.04□□□□□ -0.64
CCDC171-204ENST00000470191 NECAB3Q96P71 396 aaPredicted RBP11.04□□□□□ -0.64
CCDC171-204ENST00000470191 NKX2-4Q9H2Z4 354 aa11.04□□□□□ -0.64
CCDC171-204ENST00000470191 VCPKMTQ9H867 229 aa11.04□□□□□ -0.64
CCDC171-204ENST00000470191 ARMT1Q9H993 441 aa11.04□□□□□ -0.64
CCDC171-204ENST00000470191 MYO9BQ13459 2157 aa11.03□□□□□ -0.64
CCDC171-204ENST00000470191 WDR46O15213 610 aaKnown RBP11.03□□□□□ -0.64
CCDC171-204ENST00000470191 PRKAB2O43741 272 aa11.03□□□□□ -0.64
CCDC171-204ENST00000470191 C6orf222P0C671 652 aaPredicted RBP11.03□□□□□ -0.64
CCDC171-204ENST00000470191 PDE6AP16499 860 aa11.03□□□□□ -0.64
CCDC171-204ENST00000470191 STAT3P40763 770 aa11.03□□□□□ -0.64
CCDC171-204ENST00000470191 ADGRE1Q14246 886 aa11.03□□□□□ -0.64
CCDC171-204ENST00000470191 SLFNL1Q499Z3 407 aa11.03□□□□□ -0.64
CCDC171-204ENST00000470191 FAM83BQ5T0W9 1011 aa11.03□□□□□ -0.64
CCDC171-204ENST00000470191 MFSD5Q6N075 450 aa11.03□□□□□ -0.64
CCDC171-204ENST00000470191 ANKRD33Q7Z3H0 272 aa11.03□□□□□ -0.64
CCDC171-204ENST00000470191 RIOX2Q8IUF8 465 aa11.03□□□□□ -0.64
CCDC171-204ENST00000470191 DDX11Q96FC9 970 aa11.03□□□□□ -0.64
CCDC171-204ENST00000470191 DNAJC2Q99543 621 aaKnown RBP11.03□□□□□ -0.64
CCDC171-204ENST00000470191 TSEN34Q9BSV6 310 aaKnown RBP11.03□□□□□ -0.64
CCDC171-204ENST00000470191 SH2D4AQ9H788 454 aa11.03□□□□□ -0.64
CCDC171-204ENST00000470191 DCP1AQ9NPI6 582 aaPredicted RBP11.03□□□□□ -0.64
CCDC171-204ENST00000470191 NRBP1Q9UHY1 535 aa11.03□□□□□ -0.64
CCDC171-204ENST00000470191 MSRAQ9UJ68 235 aa11.03□□□□□ -0.64
CCDC171-204ENST00000470191 FAM184BQ9ULE4 1060 aa11.03□□□□□ -0.64
CCDC171-204ENST00000470191 EXOC6BQ9Y2D4 811 aa11.03□□□□□ -0.64
CCDC171-204ENST00000470191 TMX2Q9Y320 296 aa11.03□□□□□ -0.64
CCDC171-204ENST00000470191 MYH7P12883 1935 aa11.03□□□□□ -0.64
CCDC171-204ENST00000470191 MYH4Q9Y623 1939 aa11.03□□□□□ -0.64
CCDC171-204ENST00000470191 ZNF532Q9HCE3 1301 aa11.03□□□□□ -0.64
CCDC171-204ENST00000470191 GOLIM4O00461 696 aa11.02□□□□□ -0.65
CCDC171-204ENST00000470191 IGSF3O75054 1194 aa11.02□□□□□ -0.65
CCDC171-204ENST00000470191 ASGR1P07306 291 aa11.02□□□□□ -0.65
CCDC171-204ENST00000470191 EEF2P13639 858 aaKnown RBP11.02□□□□□ -0.65
CCDC171-204ENST00000470191 CYP2C18P33260 490 aa11.02□□□□□ -0.65
CCDC171-204ENST00000470191 PLA2G5P39877 138 aa11.02□□□□□ -0.65
CCDC171-204ENST00000470191 STK11IPQ8N1F8 1099 aa11.02□□□□□ -0.65
CCDC171-204ENST00000470191 TMEM199Q8N511 208 aa11.02□□□□□ -0.65
CCDC171-204ENST00000470191 GLT1D1Q96MS3 346 aa11.02□□□□□ -0.65
CCDC171-204ENST00000470191 TOX2Q96NM4 488 aa11.02□□□□□ -0.65
CCDC171-204ENST00000470191 NUP88Q99567 741 aaPredicted RBP11.02□□□□□ -0.65
CCDC171-204ENST00000470191 IL1RAPL2Q9NP60 686 aa11.02□□□□□ -0.65
CCDC171-204ENST00000470191 TBX21Q9UL17 535 aa11.02□□□□□ -0.65
CCDC171-204ENST00000470191 MOXD2PA6NHM9 499 aa11.01□□□□□ -0.65
CCDC171-204ENST00000470191 VWA5AO00534 786 aa11.01□□□□□ -0.65
CCDC171-204ENST00000470191 ADCY6O43306 1168 aa11.01□□□□□ -0.65
CCDC171-204ENST00000470191 SNAI1O95863 264 aaPredicted RBP11.01□□□□□ -0.65
CCDC171-204ENST00000470191 CDK8P49336 464 aa11.01□□□□□ -0.65
CCDC171-204ENST00000470191 TFF2Q03403 129 aa11.01□□□□□ -0.65
CCDC171-204ENST00000470191 SKIV2LQ15477 1246 aaKnown RBP11.01□□□□□ -0.65
CCDC171-204ENST00000470191 AKNAD1Q5T1N1 836 aa11.01□□□□□ -0.65
CCDC171-204ENST00000470191 SNRNP48Q6IEG0 339 aaKnown RBP11.01□□□□□ -0.65
CCDC171-204ENST00000470191 CCDC174Q6PII3 467 aa11.01□□□□□ -0.65
CCDC171-204ENST00000470191 ITPRIPQ8IWB1 547 aa11.01□□□□□ -0.65
CCDC171-204ENST00000470191 CPXCR1Q8N123 301 aa11.01□□□□□ -0.65
CCDC171-204ENST00000470191 KLHDC9Q8NEP7 349 aa11.01□□□□□ -0.65
CCDC171-204ENST00000470191 SLC28A3Q9HAS3 691 aa11.01□□□□□ -0.65
CCDC171-204ENST00000470191 SWAP70Q9UH65 585 aa11.01□□□□□ -0.65
CCDC171-204ENST00000470191 DIS3Q9Y2L1 958 aaKnown RBP11.01□□□□□ -0.65
CCDC171-204ENST00000470191 MROH7Q68CQ1 1323 aa11.01□□□□□ -0.65
CCDC171-204ENST00000470191 TLR3O15455 904 aaKnown RBP11□□□□□ -0.65
CCDC171-204ENST00000470191 MBD4O95243 580 aa11□□□□□ -0.65
CCDC171-204ENST00000470191 RABGGTBP53611 331 aa11□□□□□ -0.65
CCDC171-204ENST00000470191 BEX3Q00994 111 aa11□□□□□ -0.65
CCDC171-204ENST00000470191 TTF1Q15361 905 aaPredicted RBP11□□□□□ -0.65
CCDC171-204ENST00000470191 RAB30Q15771 203 aa11□□□□□ -0.65
CCDC171-204ENST00000470191 GNASQ5JWF2 1037 aa11□□□□□ -0.65
CCDC171-204ENST00000470191 ZKSCAN2Q63HK3 967 aa11□□□□□ -0.65
CCDC171-204ENST00000470191 PSRC1Q6PGN9 363 aaPredicted RBP11□□□□□ -0.65
CCDC171-204ENST00000470191 OTOP2Q7RTS6 562 aa11□□□□□ -0.65
CCDC171-204ENST00000470191 GOPCQ9HD26 462 aa11□□□□□ -0.65
CCDC171-204ENST00000470191 CXXC1Q9P0U4 656 aaPredicted RBP11□□□□□ -0.65
CCDC171-204ENST00000470191 ZNF214Q9UL59 606 aaPredicted RBP11□□□□□ -0.65
CCDC171-204ENST00000470191 PPP1R9AQ9ULJ8 1098 aa11□□□□□ -0.65
CCDC171-204ENST00000470191 YBX2Q9Y2T7 364 aaKnown RBP11□□□□□ -0.65
CCDC171-204ENST00000470191 NOP58Q9Y2X3 529 aaKnown RBP11□□□□□ -0.65
CCDC171-204ENST00000470191 RIPK3Q9Y572 518 aa11□□□□□ -0.65
CCDC171-204ENST00000470191 CTDP1Q9Y5B0 961 aaPredicted RBP11□□□□□ -0.65
CCDC171-204ENST00000470191 REV3LO60673 3130 aa11□□□□□ -0.65
CCDC171-204ENST00000470191 A0A0U1RQG5 324 aaPredicted RBP10.99□□□□□ -0.65
CCDC171-204ENST00000470191 TCRBV5S4A2TA0A5A2 114 aa10.99□□□□□ -0.65
CCDC171-204ENST00000470191 USP17L12C9JPN9 530 aa10.99□□□□□ -0.65
CCDC171-204ENST00000470191 USP17L21D6R901 530 aa10.99□□□□□ -0.65
CCDC171-204ENST00000470191 ARVCFO00192 962 aa10.99□□□□□ -0.65
CCDC171-204ENST00000470191 DUSP11O75319 330 aaKnown RBP10.99□□□□□ -0.65
CCDC171-204ENST00000470191 FGBP02675 491 aa10.99□□□□□ -0.65
CCDC171-204ENST00000470191 MYOGP15173 224 aa10.99□□□□□ -0.65
CCDC171-204ENST00000470191 CDK7P50613 346 aa10.99□□□□□ -0.65
CCDC171-204ENST00000470191 CCL23P55773 120 aa10.99□□□□□ -0.65
CCDC171-204ENST00000470191 ACVR2BQ13705 512 aa10.99□□□□□ -0.65
CCDC171-204ENST00000470191 CCDC144BQ3MJ40 725 aa10.99□□□□□ -0.65
CCDC171-204ENST00000470191 RASIP1Q5U651 963 aa10.99□□□□□ -0.65
CCDC171-204ENST00000470191 CCSAPQ6IQ19 270 aaPredicted RBP10.99□□□□□ -0.65
CCDC171-204ENST00000470191 NOL8Q76FK4 1167 aaKnown RBP10.99□□□□□ -0.65
CCDC171-204ENST00000470191 AMOTL1Q8IY63 956 aa10.99□□□□□ -0.65
CCDC171-204ENST00000470191 FTSJ3Q8IY81 847 aaKnown RBP10.99□□□□□ -0.65
CCDC171-204ENST00000470191 PCSK9Q8NBP7 692 aaKnown RBP10.99□□□□□ -0.65
CCDC171-204ENST00000470191 TSPYL2Q9H2G4 693 aaPredicted RBP10.99□□□□□ -0.65
CCDC171-204ENST00000470191 SPC25Q9HBM1 224 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms