RNA–Protein interactions for RNA: ENST00000470083.5

LSM2-209, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM2, Length 641 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-209ENST00000470083 API5Q9BZZ5 524 aaKnown RBP14.61□□□□□ -0.07
LSM2-209ENST00000470083 UPF3AQ9H1J1 476 aaKnown RBP14.61□□□□□ -0.07
LSM2-209ENST00000470083 HIPK3Q9H422 1215 aa14.61□□□□□ -0.07
LSM2-209ENST00000470083 SPC25Q9HBM1 224 aa14.61□□□□□ -0.07
LSM2-209ENST00000470083 ZHX1Q9UKY1 873 aaPredicted RBP14.61□□□□□ -0.07
LSM2-209ENST00000470083 E9PSI1 815 aa14.6□□□□□ -0.07
LSM2-209ENST00000470083 SMIM22K7EJ46 135 aa14.6□□□□□ -0.07
LSM2-209ENST00000470083 WDR46O15213 610 aaKnown RBP14.6□□□□□ -0.07
LSM2-209ENST00000470083 IRX5P78411 483 aaPredicted RBP14.6□□□□□ -0.07
LSM2-209ENST00000470083 SAMD1Q6SPF0 538 aaPredicted RBP14.6□□□□□ -0.07
LSM2-209ENST00000470083 MAMDC4Q6UXC1 1216 aa14.6□□□□□ -0.07
LSM2-209ENST00000470083 TMEM179Q6ZVK1 233 aa14.6□□□□□ -0.07
LSM2-209ENST00000470083 HLA-CQ95604 372 aa14.6□□□□□ -0.07
LSM2-209ENST00000470083 DBNDD2Q9BQY9 259 aa14.6□□□□□ -0.07
LSM2-209ENST00000470083 SH2D4AQ9H788 454 aa14.6□□□□□ -0.07
LSM2-209ENST00000470083 VCPKMTQ9H867 229 aa14.6□□□□□ -0.07
LSM2-209ENST00000470083 GPR108Q9NPR9 543 aa14.6□□□□□ -0.07
LSM2-209ENST00000470083 TMX2Q9Y320 296 aa14.6□□□□□ -0.07
LSM2-209ENST00000470083 PRR33A8MZF0 331 aa14.59□□□□□ -0.07
LSM2-209ENST00000470083 IDH1O75874 414 aaKnown RBP14.59□□□□□ -0.07
LSM2-209ENST00000470083 POLR3DP05423 398 aaPredicted RBP14.59□□□□□ -0.07
LSM2-209ENST00000470083 ATP2A2P16615 1042 aaKnown RBP14.59□□□□□ -0.07
LSM2-209ENST00000470083 STAT3P40763 770 aa14.59□□□□□ -0.07
LSM2-209ENST00000470083 GJA9P57773 515 aa14.59□□□□□ -0.07
LSM2-209ENST00000470083 TNNI3KQ59H18 835 aa14.59□□□□□ -0.07
LSM2-209ENST00000470083 GNASQ5JWF2 1037 aa14.59□□□□□ -0.07
LSM2-209ENST00000470083 TMED8Q6PL24 325 aaPredicted RBP14.59□□□□□ -0.07
LSM2-209ENST00000470083 ARHGEF10LQ9HCE6 1279 aa14.59□□□□□ -0.07
LSM2-209ENST00000470083 ZNF214Q9UL59 606 aaPredicted RBP14.59□□□□□ -0.07
LSM2-209ENST00000470083 NOB1Q9ULX3 412 aaKnown RBP14.59□□□□□ -0.07
LSM2-209ENST00000470083 FPGT-TNNI3KV9GXZ4 949 aa14.59□□□□□ -0.07
LSM2-209ENST00000470083 UMODL1Q5DID0 1318 aa14.59□□□□□ -0.07
LSM2-209ENST00000470083 RFXAPO00287 272 aa14.58□□□□□ -0.08
LSM2-209ENST00000470083 VWA5AO00534 786 aa14.58□□□□□ -0.08
LSM2-209ENST00000470083 ADCY6O43306 1168 aa14.58□□□□□ -0.08
LSM2-209ENST00000470083 SIAH1Q8IUQ4 282 aa14.58□□□□□ -0.08
LSM2-209ENST00000470083 RPUSD2Q8IZ73 545 aaKnown RBP14.58□□□□□ -0.08
LSM2-209ENST00000470083 MAGEB6Q8N7X4 407 aa14.58□□□□□ -0.08
LSM2-209ENST00000470083 SLC43A3Q8NBI5 491 aa14.58□□□□□ -0.08
LSM2-209ENST00000470083 DNAJC25-GNG10A0A024R161 153 aa14.57□□□□□ -0.08
LSM2-209ENST00000470083 EPOPA6NHQ4 379 aa14.57□□□□□ -0.08
LSM2-209ENST00000470083 ZBBXA8MT70 800 aa14.57□□□□□ -0.08
LSM2-209ENST00000470083 CA3P07451 260 aa14.57□□□□□ -0.08
LSM2-209ENST00000470083 CCL23P55773 120 aa14.57□□□□□ -0.08
LSM2-209ENST00000470083 NKX3-2P78367 333 aa14.57□□□□□ -0.08
LSM2-209ENST00000470083 ICA1Q05084 483 aa14.57□□□□□ -0.08
LSM2-209ENST00000470083 ACVR2BQ13705 512 aa14.57□□□□□ -0.08
LSM2-209ENST00000470083 TMEM67Q5HYA8 995 aa14.57□□□□□ -0.08
LSM2-209ENST00000470083 KRT40Q6A162 431 aa14.57□□□□□ -0.08
LSM2-209ENST00000470083 ZNF467Q7Z7K2 595 aaPredicted RBP14.57□□□□□ -0.08
LSM2-209ENST00000470083 REPS2Q8NFH8 660 aa14.57□□□□□ -0.08
LSM2-209ENST00000470083 RIOK1Q9BRS2 568 aaKnown RBP14.57□□□□□ -0.08
LSM2-209ENST00000470083 NOC4LQ9BVI4 516 aaKnown RBP14.57□□□□□ -0.08
LSM2-209ENST00000470083 WNT8AQ9H1J5 351 aa14.57□□□□□ -0.08
LSM2-209ENST00000470083 CD320Q9NPF0 282 aa14.57□□□□□ -0.08
LSM2-209ENST00000470083 FBXO28Q9NVF7 368 aa14.57□□□□□ -0.08
LSM2-209ENST00000470083 PPP1R9AQ9ULJ8 1098 aa14.57□□□□□ -0.08
LSM2-209ENST00000470083 LRRC37A2A6NM11 1700 aa14.57□□□□□ -0.08
LSM2-209ENST00000470083 MYH1P12882 1939 aa14.56□□□□□ -0.08
LSM2-209ENST00000470083 WDFY4Q6ZS81 3184 aa14.56□□□□□ -0.08
LSM2-209ENST00000470083 PNMA6EA0A0J9YXQ4 647 aa14.56□□□□□ -0.08
LSM2-209ENST00000470083 CTAGE5O15320 804 aa14.56□□□□□ -0.08
LSM2-209ENST00000470083 EVX2Q03828 476 aa14.56□□□□□ -0.08
LSM2-209ENST00000470083 CCDC144BQ3MJ40 725 aa14.56□□□□□ -0.08
LSM2-209ENST00000470083 CLEC10AQ8IUN9 316 aa14.56□□□□□ -0.08
LSM2-209ENST00000470083 VWCEQ96DN2 955 aa14.56□□□□□ -0.08
LSM2-209ENST00000470083 ABHD16BQ9H3Z7 469 aa14.56□□□□□ -0.08
LSM2-209ENST00000470083 CDKN2AIPQ9NXV6 580 aaPredicted RBP14.56□□□□□ -0.08
LSM2-209ENST00000470083 CABYRO75952 493 aa14.55□□□□□ -0.08
LSM2-209ENST00000470083 PFKMP08237 780 aa14.55□□□□□ -0.08
LSM2-209ENST00000470083 NHLH1Q02575 133 aa14.55□□□□□ -0.08
LSM2-209ENST00000470083 DDX11Q96FC9 970 aa14.55□□□□□ -0.08
LSM2-209ENST00000470083 TEX13BQ9BXU2 312 aa14.55□□□□□ -0.08
LSM2-209ENST00000470083 SEZ6LQ9BYH1 1024 aa14.55□□□□□ -0.08
LSM2-209ENST00000470083 CERS4Q9HA82 394 aa14.55□□□□□ -0.08
LSM2-209ENST00000470083 MCM9Q9NXL9 1143 aa14.55□□□□□ -0.08
LSM2-209ENST00000470083 SWAP70Q9UH65 585 aa14.55□□□□□ -0.08
LSM2-209ENST00000470083 TTLL4Q14679 1199 aa14.54□□□□□ -0.08
LSM2-209ENST00000470083 CXCL17Q6UXB2 119 aa14.54□□□□□ -0.08
LSM2-209ENST00000470083 ARNTL2Q8WYA1 636 aa14.54□□□□□ -0.08
LSM2-209ENST00000470083 DBNLQ9UJU6 430 aaKnown RBP14.54□□□□□ -0.08
LSM2-209ENST00000470083 B4GALT4O60513 344 aa14.53□□□□□ -0.08
LSM2-209ENST00000470083 GNAI2P04899 355 aa14.53□□□□□ -0.08
LSM2-209ENST00000470083 AKR1B1P15121 316 aa14.53□□□□□ -0.08
LSM2-209ENST00000470083 TAP1Q03518 808 aa14.53□□□□□ -0.08
LSM2-209ENST00000470083 SLFN5Q08AF3 891 aa14.53□□□□□ -0.08
LSM2-209ENST00000470083 ITGA7Q13683 1181 aa14.53□□□□□ -0.08
LSM2-209ENST00000470083 FAM9BQ8IZU0 186 aa14.53□□□□□ -0.08
LSM2-209ENST00000470083 AGBL1Q96MI9 1066 aa14.53□□□□□ -0.08
LSM2-209ENST00000470083 CRNKL1Q9BZJ0 848 aaKnown RBP14.53□□□□□ -0.08
LSM2-209ENST00000470083 TRPV6Q9H1D0 765 aa14.53□□□□□ -0.08
LSM2-209ENST00000470083 KCNH6Q9H252 994 aa14.53□□□□□ -0.08
LSM2-209ENST00000470083 GBF1Q92538 1859 aa14.52□□□□□ -0.08
LSM2-209ENST00000470083 BRWD1Q9NSI6 2320 aa14.52□□□□□ -0.08
LSM2-209ENST00000470083 GRIN2DO15399 1336 aa14.52□□□□□ -0.08
LSM2-209ENST00000470083 MAGEB6P1A0A0J9YX57 407 aa14.52□□□□□ -0.09
LSM2-209ENST00000470083 BEX3Q00994 111 aa14.52□□□□□ -0.09
LSM2-209ENST00000470083 GRB10Q13322 594 aa14.52□□□□□ -0.09
LSM2-209ENST00000470083 SNRNP48Q6IEG0 339 aaKnown RBP14.52□□□□□ -0.09
LSM2-209ENST00000470083 DHX30Q7L2E3 1194 aaKnown RBP eCLIP14.52□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms