RNA–Protein interactions for RNA: ENST00000470038.1

SNAP47-206, Transcript of synaptosome associated protein 47, humanhuman

TSL 3

Gene SNAP47, Length 739 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAP47-206ENST00000470038 C1orf53Q5VUE5 145 aa19.33■□□□□ 0.68
SNAP47-206ENST00000470038 ZNF444Q8N0Y2 327 aaPredicted RBP19.33■□□□□ 0.68
SNAP47-206ENST00000470038 CPXCR1Q8N123 301 aa19.33■□□□□ 0.68
SNAP47-206ENST00000470038 PRPF38AQ8NAV1 312 aaKnown RBP19.33■□□□□ 0.68
SNAP47-206ENST00000470038 TRIM43Q96BQ3 446 aaPredicted RBP19.33■□□□□ 0.68
SNAP47-206ENST00000470038 LENG1Q96BZ8 264 aaPredicted RBP19.33■□□□□ 0.68
SNAP47-206ENST00000470038 LTBP2Q14767 1821 aa19.32■□□□□ 0.68
SNAP47-206ENST00000470038 ZBED4O75132 1171 aa19.32■□□□□ 0.68
SNAP47-206ENST00000470038 PRDM1O75626 825 aa19.32■□□□□ 0.68
SNAP47-206ENST00000470038 ZFYP08048 801 aaPredicted RBP19.32■□□□□ 0.68
SNAP47-206ENST00000470038 GNAT2P19087 354 aa19.32■□□□□ 0.68
SNAP47-206ENST00000470038 GUCD1Q96NT3 240 aa19.32■□□□□ 0.68
SNAP47-206ENST00000470038 DCTPP1Q9H773 170 aa19.32■□□□□ 0.68
SNAP47-206ENST00000470038 ZNF287Q9HBT7 754 aa19.32■□□□□ 0.68
SNAP47-206ENST00000470038 EPB41L4AQ9HCS5 686 aaPredicted RBP19.32■□□□□ 0.68
SNAP47-206ENST00000470038 RIPK3Q9Y572 518 aa19.32■□□□□ 0.68
SNAP47-206ENST00000470038 TACC3Q9Y6A5 838 aa19.32■□□□□ 0.68
SNAP47-206ENST00000470038 ROBO3Q96MS0 1386 aa19.32■□□□□ 0.68
SNAP47-206ENST00000470038 PLXNA1Q9UIW2 1896 aa19.31■□□□□ 0.68
SNAP47-206ENST00000470038 A0A1W2PQ45 241 aaPredicted RBP19.31■□□□□ 0.68
SNAP47-206ENST00000470038 A0A1W2PQY0 241 aa19.31■□□□□ 0.68
SNAP47-206ENST00000470038 M0R2C6 588 aa19.31■□□□□ 0.68
SNAP47-206ENST00000470038 PQBP1O60828 265 aaKnown RBP19.31■□□□□ 0.68
SNAP47-206ENST00000470038 KIFC2Q96AC6 838 aa19.31■□□□□ 0.68
SNAP47-206ENST00000470038 ZHX1Q9UKY1 873 aaPredicted RBP19.31■□□□□ 0.68
SNAP47-206ENST00000470038 CLTBP09497 229 aa19.3■□□□□ 0.68
SNAP47-206ENST00000470038 MSL3Q8N5Y2 521 aaKnown RBP19.3■□□□□ 0.68
SNAP47-206ENST00000470038 CEP95Q96GE4 821 aa19.3■□□□□ 0.68
SNAP47-206ENST00000470038 RAVER2Q9HCJ3 691 aaKnown RBP19.3■□□□□ 0.68
SNAP47-206ENST00000470038 FAM184BQ9ULE4 1060 aa19.3■□□□□ 0.68
SNAP47-206ENST00000470038 GREB1LQ9C091 1923 aaPredicted RBP19.29■□□□□ 0.68
SNAP47-206ENST00000470038 SYNGAP1Q96PV0 1343 aa19.29■□□□□ 0.68
SNAP47-206ENST00000470038 IGKV6D-41A0A0C4DH26 115 aa19.29■□□□□ 0.68
SNAP47-206ENST00000470038 PATL2C9JE40 543 aaKnown RBP19.29■□□□□ 0.68
SNAP47-206ENST00000470038 SNAI1O95863 264 aaPredicted RBP19.29■□□□□ 0.68
SNAP47-206ENST00000470038 RAG1P15918 1043 aa19.29■□□□□ 0.68
SNAP47-206ENST00000470038 LRRFIP1Q32MZ4 808 aaKnown RBP19.29■□□□□ 0.68
SNAP47-206ENST00000470038 LRRC47Q8N1G4 583 aaKnown RBP19.29■□□□□ 0.68
SNAP47-206ENST00000470038 MTMR4Q9NYA4 1195 aa19.29■□□□□ 0.68
SNAP47-206ENST00000470038 ISY1Q9ULR0 285 aaKnown RBP19.29■□□□□ 0.68
SNAP47-206ENST00000470038 ATP2A1O14983 1001 aa19.28■□□□□ 0.68
SNAP47-206ENST00000470038 ADAMTS4O75173 837 aa19.28■□□□□ 0.68
SNAP47-206ENST00000470038 TTLL1O95922 423 aa19.28■□□□□ 0.68
SNAP47-206ENST00000470038 ITGB8P26012 769 aa19.28■□□□□ 0.68
SNAP47-206ENST00000470038 ACLYP53396 1101 aa19.28■□□□□ 0.68
SNAP47-206ENST00000470038 IFNL3Q8IZI9 196 aa19.28■□□□□ 0.68
SNAP47-206ENST00000470038 ANKRD35Q8N283 1001 aa19.28■□□□□ 0.68
SNAP47-206ENST00000470038 MKL1Q969V6 931 aa19.28■□□□□ 0.68
SNAP47-206ENST00000470038 TSEN34Q9BSV6 310 aaKnown RBP19.28■□□□□ 0.68
SNAP47-206ENST00000470038 NACAP1Q9BZK3 213 aa19.28■□□□□ 0.68
SNAP47-206ENST00000470038 SLC38A10Q9HBR0 1119 aa19.28■□□□□ 0.68
SNAP47-206ENST00000470038 STARD7Q9NQZ5 370 aa19.28■□□□□ 0.68
SNAP47-206ENST00000470038 TMEM39AQ9NV64 488 aa19.28■□□□□ 0.68
SNAP47-206ENST00000470038 FEM1BQ9UK73 627 aa19.28■□□□□ 0.68
SNAP47-206ENST00000470038 SYNRGQ9UMZ2 1314 aa19.27■□□□□ 0.68
SNAP47-206ENST00000470038 DNAJC25-GNG10A0A024R161 153 aa19.27■□□□□ 0.68
SNAP47-206ENST00000470038 KIAA0355O15063 1070 aa19.27■□□□□ 0.68
SNAP47-206ENST00000470038 TSPY3P0CV98 308 aa19.27■□□□□ 0.68
SNAP47-206ENST00000470038 TSPY8P0CW00 308 aa19.27■□□□□ 0.68
SNAP47-206ENST00000470038 MAMDC4Q6UXC1 1216 aa19.27■□□□□ 0.68
SNAP47-206ENST00000470038 NUP133Q8WUM0 1156 aa19.27■□□□□ 0.68
SNAP47-206ENST00000470038 SEC62Q99442 399 aaKnown RBP19.27■□□□□ 0.68
SNAP47-206ENST00000470038 SEMA6BQ9H3T3 888 aa19.27■□□□□ 0.68
SNAP47-206ENST00000470038 DCDC2CA8MYV0 355 aa19.26■□□□□ 0.67
SNAP47-206ENST00000470038 SMAD3P84022 425 aaKnown RBP19.26■□□□□ 0.67
SNAP47-206ENST00000470038 PDE4BQ07343 736 aa19.26■□□□□ 0.67
SNAP47-206ENST00000470038 ACVR2BQ13705 512 aa19.26■□□□□ 0.67
SNAP47-206ENST00000470038 KCNA10Q16322 511 aa19.26■□□□□ 0.67
SNAP47-206ENST00000470038 SLFN13Q68D06 897 aa19.26■□□□□ 0.67
SNAP47-206ENST00000470038 ZNF467Q7Z7K2 595 aaPredicted RBP19.26■□□□□ 0.67
SNAP47-206ENST00000470038 PHF6Q8IWS0 365 aaKnown RBP eCLIP19.26■□□□□ 0.67
SNAP47-206ENST00000470038 GMCL1P1Q8NEA9 526 aa19.26■□□□□ 0.67
SNAP47-206ENST00000470038 RNPC3Q96LT9 517 aaKnown RBP19.26■□□□□ 0.67
SNAP47-206ENST00000470038 CDX2Q99626 313 aaPredicted RBP19.26■□□□□ 0.67
SNAP47-206ENST00000470038 NAPBQ9H115 298 aa19.26■□□□□ 0.67
SNAP47-206ENST00000470038 CDKN2AIPQ9NXV6 580 aaPredicted RBP19.26■□□□□ 0.67
SNAP47-206ENST00000470038 FBXO40Q9UH90 709 aa19.26■□□□□ 0.67
SNAP47-206ENST00000470038 MYH4Q9Y623 1939 aa19.25■□□□□ 0.67
SNAP47-206ENST00000470038 MOXD2PA6NHM9 499 aa19.25■□□□□ 0.67
SNAP47-206ENST00000470038 ERC2O15083 957 aa19.25■□□□□ 0.67
SNAP47-206ENST00000470038 DUSP11O75319 330 aaKnown RBP19.25■□□□□ 0.67
SNAP47-206ENST00000470038 SLC3A2P08195 630 aaKnown RBP19.25■□□□□ 0.67
SNAP47-206ENST00000470038 C6orf222P0C671 652 aaPredicted RBP19.25■□□□□ 0.67
SNAP47-206ENST00000470038 BMP3P12645 472 aa19.25■□□□□ 0.67
SNAP47-206ENST00000470038 EPHB4P54760 987 aa19.25■□□□□ 0.67
SNAP47-206ENST00000470038 TFAP4Q01664 338 aa19.25■□□□□ 0.67
SNAP47-206ENST00000470038 KLHDC9Q8NEP7 349 aa19.25■□□□□ 0.67
SNAP47-206ENST00000470038 CHST13Q8NET6 341 aa19.25■□□□□ 0.67
SNAP47-206ENST00000470038 NEDD1Q8NHV4 660 aa19.25■□□□□ 0.67
SNAP47-206ENST00000470038 VTI1AQ96AJ9 217 aa19.25■□□□□ 0.67
SNAP47-206ENST00000470038 CHMP4CQ96CF2 233 aa19.25■□□□□ 0.67
SNAP47-206ENST00000470038 FSD1Q9BTV5 496 aa19.25■□□□□ 0.67
SNAP47-206ENST00000470038 SPC25Q9HBM1 224 aa19.25■□□□□ 0.67
SNAP47-206ENST00000470038 HOMER2Q9NSB8 354 aa19.25■□□□□ 0.67
SNAP47-206ENST00000470038 SYNPO2Q9UMS6 1093 aa19.25■□□□□ 0.67
SNAP47-206ENST00000470038 TTC41PQ6P2S7 1318 aa19.25■□□□□ 0.67
SNAP47-206ENST00000470038 UNC80Q8N2C7 3258 aa19.24■□□□□ 0.67
SNAP47-206ENST00000470038 MYADML2A6NDP7 307 aa19.24■□□□□ 0.67
SNAP47-206ENST00000470038 TMEM232C9JQI7 657 aa19.24■□□□□ 0.67
SNAP47-206ENST00000470038 OAZ1P54368 228 aa19.24■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms