RNA–Protein interactions for RNA: ENST00000469769.1

THBS3-206, Transcript of thrombospondin 3, humanhuman

TSL 2

Gene THBS3, Length 777 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-206ENST00000469769 KIF3AQ9Y496 699 aa12.04□□□□□ -0.48
THBS3-206ENST00000469769 V9GY48 417 aaPredicted RBP12.04□□□□□ -0.48
THBS3-206ENST00000469769 FRMPD2Q68DX3 1309 aaPredicted RBP12.04□□□□□ -0.48
THBS3-206ENST00000469769 MYPNQ86TC9 1320 aa12.04□□□□□ -0.48
THBS3-206ENST00000469769 TESPA1A2RU30 521 aaPredicted RBP12.03□□□□□ -0.48
THBS3-206ENST00000469769 TMEM232C9JQI7 657 aa12.03□□□□□ -0.48
THBS3-206ENST00000469769 FDX1P10109 184 aa12.03□□□□□ -0.48
THBS3-206ENST00000469769 SYT1P21579 422 aa12.03□□□□□ -0.48
THBS3-206ENST00000469769 APLP1P51693 650 aa12.03□□□□□ -0.48
THBS3-206ENST00000469769 CCDC96Q2M329 555 aa12.03□□□□□ -0.48
THBS3-206ENST00000469769 FAM83BQ5T0W9 1011 aa12.03□□□□□ -0.48
THBS3-206ENST00000469769 SYDE2Q5VT97 1194 aa12.03□□□□□ -0.48
THBS3-206ENST00000469769 SPRYD7Q5W111 196 aa12.03□□□□□ -0.48
THBS3-206ENST00000469769 CATSPERGQ6ZRH7 1159 aa12.03□□□□□ -0.48
THBS3-206ENST00000469769 FASTKD5Q7L8L6 764 aaKnown RBP12.03□□□□□ -0.48
THBS3-206ENST00000469769 FBXO18Q8NFZ0 1043 aa12.03□□□□□ -0.48
THBS3-206ENST00000469769 WASF1Q92558 559 aa12.03□□□□□ -0.48
THBS3-206ENST00000469769 OTUD5Q96G74 571 aa12.03□□□□□ -0.48
THBS3-206ENST00000469769 RANBP17Q9H2T7 1088 aaKnown RBP12.03□□□□□ -0.48
THBS3-206ENST00000469769 CPVLQ9H3G5 476 aa12.03□□□□□ -0.48
THBS3-206ENST00000469769 GPCPD1Q9NPB8 672 aa12.03□□□□□ -0.48
THBS3-206ENST00000469769 FOXD4L1Q9NU39 408 aa12.03□□□□□ -0.48
THBS3-206ENST00000469769 PRR12Q9ULL5 1215 aa12.03□□□□□ -0.48
THBS3-206ENST00000469769 PNMA6FA0A0J9YX94 578 aa12.02□□□□□ -0.49
THBS3-206ENST00000469769 hCG_1984214I3L0E3 225 aa12.02□□□□□ -0.49
THBS3-206ENST00000469769 ZBTB5O15062 677 aa12.02□□□□□ -0.49
THBS3-206ENST00000469769 BRD1O95696 1058 aa12.02□□□□□ -0.49
THBS3-206ENST00000469769 SCG2P13521 617 aa12.02□□□□□ -0.49
THBS3-206ENST00000469769 SLC16A2P36021 539 aa12.02□□□□□ -0.49
THBS3-206ENST00000469769 HUNKP57058 714 aa12.02□□□□□ -0.49
THBS3-206ENST00000469769 SNAPC2Q13487 334 aa12.02□□□□□ -0.49
THBS3-206ENST00000469769 DGKZQ13574 1117 aa12.02□□□□□ -0.49
THBS3-206ENST00000469769 ZYXQ15942 572 aaKnown RBP12.02□□□□□ -0.49
THBS3-206ENST00000469769 LARP1BQ659C4 914 aaKnown RBP12.02□□□□□ -0.49
THBS3-206ENST00000469769 GPAT2Q6NUI2 795 aa12.02□□□□□ -0.49
THBS3-206ENST00000469769 LBX2Q6XYB7 198 aa12.02□□□□□ -0.49
THBS3-206ENST00000469769 CCDC82Q8N4S0 544 aa12.02□□□□□ -0.49
THBS3-206ENST00000469769 ZNF713Q8N859 430 aaPredicted RBP12.02□□□□□ -0.49
THBS3-206ENST00000469769 PRPF38AQ8NAV1 312 aaKnown RBP12.02□□□□□ -0.49
THBS3-206ENST00000469769 SPRYD3Q8NCJ5 442 aa12.02□□□□□ -0.49
THBS3-206ENST00000469769 SHISA4Q96DD7 197 aa12.02□□□□□ -0.49
THBS3-206ENST00000469769 DDX11Q96FC9 970 aa12.02□□□□□ -0.49
THBS3-206ENST00000469769 ALG1Q9BT22 464 aa12.02□□□□□ -0.49
THBS3-206ENST00000469769 RPAP3Q9H6T3 665 aaPredicted RBP12.02□□□□□ -0.49
THBS3-206ENST00000469769 SH3GLB2Q9NR46 395 aa12.02□□□□□ -0.49
THBS3-206ENST00000469769 TMOD4Q9NZQ9 345 aa12.02□□□□□ -0.49
THBS3-206ENST00000469769 PPP1R9AQ9ULJ8 1098 aa12.02□□□□□ -0.49
THBS3-206ENST00000469769 MTMR7Q9Y216 660 aa12.02□□□□□ -0.49
THBS3-206ENST00000469769 SLC45A1Q9Y2W3 748 aa12.02□□□□□ -0.49
THBS3-206ENST00000469769 ZDHHC9Q9Y397 364 aa12.02□□□□□ -0.49
THBS3-206ENST00000469769 SMCHD1A6NHR9 2005 aa12.02□□□□□ -0.49
THBS3-206ENST00000469769 TMEM88BA6NKF7 163 aa12.01□□□□□ -0.49
THBS3-206ENST00000469769 USP17L15C9J2P7 530 aa12.01□□□□□ -0.49
THBS3-206ENST00000469769 USP17L13C9JLJ4 530 aa12.01□□□□□ -0.49
THBS3-206ENST00000469769 USP17L11C9JVI0 530 aa12.01□□□□□ -0.49
THBS3-206ENST00000469769 USP17L18D6R9N7 530 aa12.01□□□□□ -0.49
THBS3-206ENST00000469769 USP17L22D6RA61 530 aa12.01□□□□□ -0.49
THBS3-206ENST00000469769 USP17L17D6RBQ6 530 aa12.01□□□□□ -0.49
THBS3-206ENST00000469769 USP17L19D6RCP7 530 aa12.01□□□□□ -0.49
THBS3-206ENST00000469769 USP17L20D6RJB6 530 aa12.01□□□□□ -0.49
THBS3-206ENST00000469769 STX6O43752 255 aa12.01□□□□□ -0.49
THBS3-206ENST00000469769 DTNBO60941 627 aa12.01□□□□□ -0.49
THBS3-206ENST00000469769 NUCB2P80303 420 aa12.01□□□□□ -0.49
THBS3-206ENST00000469769 AKAP17AQ02040 695 aaKnown RBP12.01□□□□□ -0.49
THBS3-206ENST00000469769 USP17L24Q0WX57 530 aa12.01□□□□□ -0.49
THBS3-206ENST00000469769 RGMBQ6NW40 437 aa12.01□□□□□ -0.49
THBS3-206ENST00000469769 RASAL3Q86YV0 1011 aa12.01□□□□□ -0.49
THBS3-206ENST00000469769 TEX2Q8IWB9 1127 aa12.01□□□□□ -0.49
THBS3-206ENST00000469769 FAM184AQ8NB25 1140 aa12.01□□□□□ -0.49
THBS3-206ENST00000469769 REPS2Q8NFH8 660 aa12.01□□□□□ -0.49
THBS3-206ENST00000469769 RRP36Q96EU6 259 aaKnown RBP12.01□□□□□ -0.49
THBS3-206ENST00000469769 AIFM3Q96NN9 605 aa12.01□□□□□ -0.49
THBS3-206ENST00000469769 PIGSQ96S52 555 aa12.01□□□□□ -0.49
THBS3-206ENST00000469769 SLF1Q9BQI6 1058 aa12.01□□□□□ -0.49
THBS3-206ENST00000469769 FBXO28Q9NVF7 368 aa12.01□□□□□ -0.49
THBS3-206ENST00000469769 BARHL2Q9NY43 387 aa12.01□□□□□ -0.49
THBS3-206ENST00000469769 CHMP5Q9NZZ3 219 aa12.01□□□□□ -0.49
THBS3-206ENST00000469769 AGTPBP1Q9UPW5 1226 aa12.01□□□□□ -0.49
THBS3-206ENST00000469769 MTMR6Q9Y217 621 aa12.01□□□□□ -0.49
THBS3-206ENST00000469769 ESYT2A0FGR8 921 aa12□□□□□ -0.49
THBS3-206ENST00000469769 FAM155AB1AL88 458 aaPredicted RBP12□□□□□ -0.49
THBS3-206ENST00000469769 ATP2A1O14983 1001 aa12□□□□□ -0.49
THBS3-206ENST00000469769 PPP1R11O60927 126 aaPredicted RBP12□□□□□ -0.49
THBS3-206ENST00000469769 SLC10A3P09131 477 aa12□□□□□ -0.49
THBS3-206ENST00000469769 DSG3P32926 999 aa12□□□□□ -0.49
THBS3-206ENST00000469769 GTF2A2P52657 109 aa12□□□□□ -0.49
THBS3-206ENST00000469769 PKP1Q13835 747 aa12□□□□□ -0.49
THBS3-206ENST00000469769 COG2Q14746 738 aa12□□□□□ -0.49
THBS3-206ENST00000469769 NPY5RQ15761 445 aa12□□□□□ -0.49
THBS3-206ENST00000469769 TYW1BQ6NUM6 668 aa12□□□□□ -0.49
THBS3-206ENST00000469769 C8orf76Q96K31 380 aa12□□□□□ -0.49
THBS3-206ENST00000469769 SLC38A10Q9HBR0 1119 aa12□□□□□ -0.49
THBS3-206ENST00000469769 A0A0G2JMZ2 1700 aa12□□□□□ -0.49
THBS3-206ENST00000469769 hCG_1642624A0A1W2PR95 340 aa11.99□□□□□ -0.49
THBS3-206ENST00000469769 STXBP3O00186 592 aa11.99□□□□□ -0.49
THBS3-206ENST00000469769 RAD21O60216 631 aa11.99□□□□□ -0.49
THBS3-206ENST00000469769 PPFIA3O75145 1194 aa11.99□□□□□ -0.49
THBS3-206ENST00000469769 CETPP11597 493 aa11.99□□□□□ -0.49
THBS3-206ENST00000469769 OAZ1P54368 228 aa11.99□□□□□ -0.49
THBS3-206ENST00000469769 TRAF1Q13077 416 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms