RNA–Protein interactions for RNA: ENST00000469687.2

CBWD3-205, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 2,195 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-205ENST00000469687 GPR75-ASB3A0A0A6YYF3 556 aa16.62■□□□□ 0.25
CBWD3-205ENST00000469687 SOWAHDA6NJG2 315 aa16.62■□□□□ 0.25
CBWD3-205ENST00000469687 GTPBP6O43824 516 aaPredicted RBP16.62■□□□□ 0.25
CBWD3-205ENST00000469687 IL1R1P14778 569 aa16.62■□□□□ 0.25
CBWD3-205ENST00000469687 CCT6AP40227 531 aaKnown RBP16.62■□□□□ 0.25
CBWD3-205ENST00000469687 PBX1P40424 430 aa16.62■□□□□ 0.25
CBWD3-205ENST00000469687 RHBDL3P58872 404 aa16.62■□□□□ 0.25
CBWD3-205ENST00000469687 ERCC6LQ2NKX8 1250 aa16.62■□□□□ 0.25
CBWD3-205ENST00000469687 NAALADL2Q58DX5 795 aa16.62■□□□□ 0.25
CBWD3-205ENST00000469687 CT47A1Q5JQC4 288 aaPredicted RBP16.62■□□□□ 0.25
CBWD3-205ENST00000469687 MFSD14BQ5SR56 506 aa16.62■□□□□ 0.25
CBWD3-205ENST00000469687 USP17L2Q6R6M4 530 aa16.62■□□□□ 0.25
CBWD3-205ENST00000469687 FCHSD1Q86WN1 690 aa16.62■□□□□ 0.25
CBWD3-205ENST00000469687 IGSF22Q8N9C0 903 aa16.62■□□□□ 0.25
CBWD3-205ENST00000469687 CERKQ8TCT0 537 aa16.62■□□□□ 0.25
CBWD3-205ENST00000469687 LRRC15Q8TF66 581 aa16.62■□□□□ 0.25
CBWD3-205ENST00000469687 CGNQ9P2M7 1197 aaKnown RBP16.62■□□□□ 0.25
CBWD3-205ENST00000469687 PHLPP2Q6ZVD8 1323 aa16.62■□□□□ 0.25
CBWD3-205ENST00000469687 KLRF2D3W0D1 207 aa16.61■□□□□ 0.25
CBWD3-205ENST00000469687 LONP1P36776 959 aaKnown RBP16.61■□□□□ 0.25
CBWD3-205ENST00000469687 STAT6P42226 847 aa16.61■□□□□ 0.25
CBWD3-205ENST00000469687 GNAQP50148 359 aa16.61■□□□□ 0.25
CBWD3-205ENST00000469687 C16orf86Q6ZW13 317 aa16.61■□□□□ 0.25
CBWD3-205ENST00000469687 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP16.61■□□□□ 0.25
CBWD3-205ENST00000469687 ZSCAN12O43309 604 aa16.61■□□□□ 0.25
CBWD3-205ENST00000469687 FBXO38Q6PIJ6 1188 aa16.61■□□□□ 0.25
CBWD3-205ENST00000469687 CEP95Q96GE4 821 aa16.61■□□□□ 0.25
CBWD3-205ENST00000469687 WDR24Q96S15 920 aa16.61■□□□□ 0.25
CBWD3-205ENST00000469687 DISC1Q9NRI5 854 aa16.61■□□□□ 0.25
CBWD3-205ENST00000469687 A0A0U1RQJ8 604 aa16.6■□□□□ 0.25
CBWD3-205ENST00000469687 RPN1P04843 607 aaKnown RBP16.6■□□□□ 0.25
CBWD3-205ENST00000469687 ATP2B4P23634 1241 aa16.6■□□□□ 0.25
CBWD3-205ENST00000469687 ST5P78524 1137 aa16.6■□□□□ 0.25
CBWD3-205ENST00000469687 SEPT12Q8IYM1 358 aa16.6■□□□□ 0.25
CBWD3-205ENST00000469687 TBC1D16Q8TBP0 767 aa16.6■□□□□ 0.25
CBWD3-205ENST00000469687 ATRIPQ8WXE1 791 aa16.6■□□□□ 0.25
CBWD3-205ENST00000469687 AKR1B15C9JRZ8 316 aaPredicted RBP16.6■□□□□ 0.25
CBWD3-205ENST00000469687 DDR1Q08345 913 aa16.6■□□□□ 0.25
CBWD3-205ENST00000469687 KRT31Q15323 416 aa16.6■□□□□ 0.25
CBWD3-205ENST00000469687 DTHD1Q6ZMT9 781 aa16.6■□□□□ 0.25
CBWD3-205ENST00000469687 DAGLBQ8NCG7 672 aa16.6■□□□□ 0.25
CBWD3-205ENST00000469687 CCDC148Q8NFR7 591 aa16.6■□□□□ 0.25
CBWD3-205ENST00000469687 NELFBQ8WX92 580 aa16.6■□□□□ 0.25
CBWD3-205ENST00000469687 RBM17Q96I25 401 aaKnown RBP16.6■□□□□ 0.25
CBWD3-205ENST00000469687 MRPL44Q9H9J2 332 aaKnown RBP16.6■□□□□ 0.25
CBWD3-205ENST00000469687 VAT1LQ9HCJ6 419 aa16.6■□□□□ 0.25
CBWD3-205ENST00000469687 FOCADQ5VW36 1801 aa16.59■□□□□ 0.25
CBWD3-205ENST00000469687 URI1O94763 535 aaPredicted RBP16.59■□□□□ 0.25
CBWD3-205ENST00000469687 ADRA2BP18089 450 aa16.59■□□□□ 0.25
CBWD3-205ENST00000469687 PRCPP42785 496 aa16.59■□□□□ 0.25
CBWD3-205ENST00000469687 PAK1Q13153 545 aa16.59■□□□□ 0.25
CBWD3-205ENST00000469687 CCDC178Q5BJE1 867 aa16.59■□□□□ 0.25
CBWD3-205ENST00000469687 ZNF658Q5TYW1 1059 aaPredicted RBP16.59■□□□□ 0.25
CBWD3-205ENST00000469687 CREBRFQ8IUR6 639 aa16.59■□□□□ 0.25
CBWD3-205ENST00000469687 NEDD1Q8NHV4 660 aa16.59■□□□□ 0.25
CBWD3-205ENST00000469687 PARP3Q9Y6F1 533 aa16.59■□□□□ 0.25
CBWD3-205ENST00000469687 TRIM49BA6NDI0 452 aa16.58■□□□□ 0.25
CBWD3-205ENST00000469687 TUBB4AP04350 444 aa16.58■□□□□ 0.25
CBWD3-205ENST00000469687 CASP14P31944 242 aa16.58■□□□□ 0.25
CBWD3-205ENST00000469687 TXLNAP40222 546 aa16.58■□□□□ 0.25
CBWD3-205ENST00000469687 NAPAP54920 295 aa16.58■□□□□ 0.25
CBWD3-205ENST00000469687 RAD9BQ6WBX8 426 aa16.58■□□□□ 0.25
CBWD3-205ENST00000469687 IRX2Q9BZI1 471 aaPredicted RBP16.58■□□□□ 0.25
CBWD3-205ENST00000469687 VPS16Q9H269 839 aa16.58■□□□□ 0.25
CBWD3-205ENST00000469687 RWDD2AQ9UIY3 292 aa16.58■□□□□ 0.25
CBWD3-205ENST00000469687 SPATA31A6Q5VVP1 1343 aa16.58■□□□□ 0.24
CBWD3-205ENST00000469687 C6orf229H3BNL8 230 aa16.58■□□□□ 0.24
CBWD3-205ENST00000469687 GYPCP04921 128 aa16.58■□□□□ 0.24
CBWD3-205ENST00000469687 PARP1P09874 1014 aaKnown RBP16.58■□□□□ 0.24
CBWD3-205ENST00000469687 FXR1P51114 621 aaKnown RBP eCLIP16.58■□□□□ 0.24
CBWD3-205ENST00000469687 GNG11P61952 73 aa16.58■□□□□ 0.24
CBWD3-205ENST00000469687 MEX3CQ5U5Q3 659 aaKnown RBP16.58■□□□□ 0.24
CBWD3-205ENST00000469687 ZNF397Q8NF99 534 aaPredicted RBP16.58■□□□□ 0.24
CBWD3-205ENST00000469687 RASSF8Q8NHQ8 419 aa16.58■□□□□ 0.24
CBWD3-205ENST00000469687 CTAGE1Q96RT6 745 aa16.58■□□□□ 0.24
CBWD3-205ENST00000469687 PYM1Q9BRP8 204 aaKnown RBP16.58■□□□□ 0.24
CBWD3-205ENST00000469687 SPZ1Q9BXG8 430 aa16.58■□□□□ 0.24
CBWD3-205ENST00000469687 UBA5Q9GZZ9 404 aa16.58■□□□□ 0.24
CBWD3-205ENST00000469687 TAB2Q9NYJ8 693 aa16.58■□□□□ 0.24
CBWD3-205ENST00000469687 LTBP1Q14766 1721 aa16.58■□□□□ 0.24
CBWD3-205ENST00000469687 GAKO14976 1311 aa16.57■□□□□ 0.24
CBWD3-205ENST00000469687 AFF2P51816 1311 aa16.57■□□□□ 0.24
CBWD3-205ENST00000469687 USP17L5A8MUK1 530 aa16.57■□□□□ 0.24
CBWD3-205ENST00000469687 RNF225M0QZC1 329 aaPredicted RBP16.57■□□□□ 0.24
CBWD3-205ENST00000469687 NT5C2P49902 561 aa16.57■□□□□ 0.24
CBWD3-205ENST00000469687 PMS1P54277 932 aaKnown RBP16.57■□□□□ 0.24
CBWD3-205ENST00000469687 PPFIBP1Q86W92 1011 aa16.57■□□□□ 0.24
CBWD3-205ENST00000469687 CLEC10AQ8IUN9 316 aa16.57■□□□□ 0.24
CBWD3-205ENST00000469687 PANX2Q96RD6 677 aa16.57■□□□□ 0.24
CBWD3-205ENST00000469687 ZMYND12Q9H0C1 365 aa16.57■□□□□ 0.24
CBWD3-205ENST00000469687 DAGLAQ9Y4D2 1042 aa16.57■□□□□ 0.24
CBWD3-205ENST00000469687 F8W031 263 aaPredicted RBP16.57■□□□□ 0.24
CBWD3-205ENST00000469687 RIMBP2O15034 1052 aa16.57■□□□□ 0.24
CBWD3-205ENST00000469687 IGSF3O75054 1194 aa16.57■□□□□ 0.24
CBWD3-205ENST00000469687 MFAP3LO75121 409 aa16.57■□□□□ 0.24
CBWD3-205ENST00000469687 GTF2IP78347 998 aa16.57■□□□□ 0.24
CBWD3-205ENST00000469687 PICALMQ13492 652 aa16.57■□□□□ 0.24
CBWD3-205ENST00000469687 LETM2Q2VYF4 491 aa16.57■□□□□ 0.24
CBWD3-205ENST00000469687 FILIP1LQ4L180 1135 aa16.57■□□□□ 0.24
CBWD3-205ENST00000469687 PIGSQ96S52 555 aa16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms