RNA–Protein interactions for RNA: ENST00000469498.1

GAPVD1-213, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 3

Gene GAPVD1, Length 385 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-213ENST00000469498 CATIPQ7Z7H3 387 aa9.8□□□□□ -0.84
GAPVD1-213ENST00000469498 FBXL16Q8N461 479 aa9.8□□□□□ -0.84
GAPVD1-213ENST00000469498 NECAB1Q8N987 351 aa9.8□□□□□ -0.84
GAPVD1-213ENST00000469498 ANKS1AQ92625 1134 aa9.8□□□□□ -0.84
GAPVD1-213ENST00000469498 OPTNQ96CV9 577 aa9.8□□□□□ -0.84
GAPVD1-213ENST00000469498 TBC1D2Q9BYX2 928 aa9.8□□□□□ -0.84
GAPVD1-213ENST00000469498 SH2D4AQ9H788 454 aa9.8□□□□□ -0.84
GAPVD1-213ENST00000469498 ABT1Q9ULW3 272 aaKnown RBP9.8□□□□□ -0.84
GAPVD1-213ENST00000469498 LIMCH1Q9UPQ0 1083 aa9.8□□□□□ -0.84
GAPVD1-213ENST00000469498 ZHX2Q9Y6X8 837 aa9.8□□□□□ -0.84
GAPVD1-213ENST00000469498 THSD7BQ9C0I4 1608 aa9.8□□□□□ -0.84
GAPVD1-213ENST00000469498 ZNFX1Q9P2E3 1918 aaKnown RBP9.8□□□□□ -0.84
GAPVD1-213ENST00000469498 FRMPD2Q68DX3 1309 aaPredicted RBP9.8□□□□□ -0.84
GAPVD1-213ENST00000469498 PLXNB2O15031 1838 aa9.79□□□□□ -0.84
GAPVD1-213ENST00000469498 NID2Q14112 1375 aa9.79□□□□□ -0.84
GAPVD1-213ENST00000469498 K7ELQ4 463 aaPredicted RBP9.79□□□□□ -0.84
GAPVD1-213ENST00000469498 TULP1O00294 542 aaPredicted RBP9.79□□□□□ -0.84
GAPVD1-213ENST00000469498 DTNBO60941 627 aa9.79□□□□□ -0.84
GAPVD1-213ENST00000469498 NDUFB10O96000 172 aa9.79□□□□□ -0.84
GAPVD1-213ENST00000469498 PDIA3P30101 505 aaKnown RBP9.79□□□□□ -0.84
GAPVD1-213ENST00000469498 GJA5P36382 358 aa9.79□□□□□ -0.84
GAPVD1-213ENST00000469498 MCM2P49736 904 aa9.79□□□□□ -0.84
GAPVD1-213ENST00000469498 METAP2P50579 478 aaKnown RBP eCLIP9.79□□□□□ -0.84
GAPVD1-213ENST00000469498 CCT2P78371 535 aaKnown RBP9.79□□□□□ -0.84
GAPVD1-213ENST00000469498 ST3GAL1Q11201 340 aa9.79□□□□□ -0.84
GAPVD1-213ENST00000469498 ME3Q16798 604 aa9.79□□□□□ -0.84
GAPVD1-213ENST00000469498 CCDC96Q2M329 555 aa9.79□□□□□ -0.84
GAPVD1-213ENST00000469498 KIAA1755Q5JYT7 1200 aa9.79□□□□□ -0.84
GAPVD1-213ENST00000469498 ERO1BQ86YB8 467 aa9.79□□□□□ -0.84
GAPVD1-213ENST00000469498 CCDC83Q8IWF9 413 aa9.79□□□□□ -0.84
GAPVD1-213ENST00000469498 SPICE1Q8N0Z3 855 aa9.79□□□□□ -0.84
GAPVD1-213ENST00000469498 TMTC2Q8N394 836 aa9.79□□□□□ -0.84
GAPVD1-213ENST00000469498 ZNF280CQ8ND82 737 aa9.79□□□□□ -0.84
GAPVD1-213ENST00000469498 SNX21Q969T3 373 aa9.79□□□□□ -0.84
GAPVD1-213ENST00000469498 SLC10A4Q96EP9 437 aa9.79□□□□□ -0.84
GAPVD1-213ENST00000469498 WNK4Q96J92 1243 aa9.79□□□□□ -0.84
GAPVD1-213ENST00000469498 TMX3Q96JJ7 454 aa9.79□□□□□ -0.84
GAPVD1-213ENST00000469498 NUP88Q99567 741 aaPredicted RBP9.79□□□□□ -0.84
GAPVD1-213ENST00000469498 SLKQ9H2G2 1235 aaPredicted RBP9.79□□□□□ -0.84
GAPVD1-213ENST00000469498 NCOA5Q9HCD5 579 aaKnown RBP9.79□□□□□ -0.84
GAPVD1-213ENST00000469498 GOPCQ9HD26 462 aa9.79□□□□□ -0.84
GAPVD1-213ENST00000469498 HPS5Q9UPZ3 1129 aa9.79□□□□□ -0.84
GAPVD1-213ENST00000469498 TMX2Q9Y320 296 aa9.79□□□□□ -0.84
GAPVD1-213ENST00000469498 TMEM88BA6NKF7 163 aa9.78□□□□□ -0.84
GAPVD1-213ENST00000469498 USP17L10C9JJH3 530 aa9.78□□□□□ -0.84
GAPVD1-213ENST00000469498 IRF6O14896 467 aa9.78□□□□□ -0.84
GAPVD1-213ENST00000469498 GOLGA8HP0CJ92 632 aa9.78□□□□□ -0.84
GAPVD1-213ENST00000469498 PDHBP11177 359 aa9.78□□□□□ -0.84
GAPVD1-213ENST00000469498 HMGCS2P54868 508 aa9.78□□□□□ -0.84
GAPVD1-213ENST00000469498 EVCP57679 992 aa9.78□□□□□ -0.84
GAPVD1-213ENST00000469498 PPATQ06203 517 aa9.78□□□□□ -0.84
GAPVD1-213ENST00000469498 TROAPQ12815 778 aa9.78□□□□□ -0.84
GAPVD1-213ENST00000469498 PPIL2Q13356 520 aa9.78□□□□□ -0.84
GAPVD1-213ENST00000469498 GRM4Q14833 912 aa9.78□□□□□ -0.84
GAPVD1-213ENST00000469498 RTN1Q16799 776 aa9.78□□□□□ -0.84
GAPVD1-213ENST00000469498 SLFN13Q68D06 897 aa9.78□□□□□ -0.84
GAPVD1-213ENST00000469498 Q6ZNB5 142 aa9.78□□□□□ -0.84
GAPVD1-213ENST00000469498 GMCL1P1Q8NEA9 526 aa9.78□□□□□ -0.84
GAPVD1-213ENST00000469498 CTCFLQ8NI51 663 aaPredicted RBP9.78□□□□□ -0.84
GAPVD1-213ENST00000469498 GTF3C6Q969F1 213 aa9.78□□□□□ -0.84
GAPVD1-213ENST00000469498 MKL1Q969V6 931 aa9.78□□□□□ -0.84
GAPVD1-213ENST00000469498 ZNF274Q96GC6 653 aaPredicted RBP9.78□□□□□ -0.84
GAPVD1-213ENST00000469498 ZSCAN31Q96LW9 406 aaPredicted RBP9.78□□□□□ -0.84
GAPVD1-213ENST00000469498 WDR18Q9BV38 432 aa9.78□□□□□ -0.84
GAPVD1-213ENST00000469498 KIAA1683Q9H0B3 1180 aa9.78□□□□□ -0.84
GAPVD1-213ENST00000469498 VCPKMTQ9H867 229 aa9.78□□□□□ -0.84
GAPVD1-213ENST00000469498 SH2B1Q9NRF2 756 aaPredicted RBP9.78□□□□□ -0.84
GAPVD1-213ENST00000469498 AFG3L2Q9Y4W6 797 aa9.78□□□□□ -0.84
GAPVD1-213ENST00000469498 TLL2Q9Y6L7 1015 aa9.78□□□□□ -0.84
GAPVD1-213ENST00000469498 PLXNA1Q9UIW2 1896 aa9.78□□□□□ -0.84
GAPVD1-213ENST00000469498 LCTP09848 1927 aa9.78□□□□□ -0.84
GAPVD1-213ENST00000469498 TCHHQ07283 1943 aa9.78□□□□□ -0.84
GAPVD1-213ENST00000469498 F5H6K3 240 aa9.77□□□□□ -0.85
GAPVD1-213ENST00000469498 PFKFB2O60825 505 aa9.77□□□□□ -0.85
GAPVD1-213ENST00000469498 PPFIA3O75145 1194 aa9.77□□□□□ -0.85
GAPVD1-213ENST00000469498 PLEKHA8P1O95397 391 aa9.77□□□□□ -0.85
GAPVD1-213ENST00000469498 PARP1P09874 1014 aaKnown RBP9.77□□□□□ -0.85
GAPVD1-213ENST00000469498 CALM1P0DP23 149 aa9.77□□□□□ -0.85
GAPVD1-213ENST00000469498 CALM2P0DP24 149 aa9.77□□□□□ -0.85
GAPVD1-213ENST00000469498 CALM3P0DP25 149 aa9.77□□□□□ -0.85
GAPVD1-213ENST00000469498 CDC27P30260 824 aa9.77□□□□□ -0.85
GAPVD1-213ENST00000469498 USP14P54578 494 aa9.77□□□□□ -0.85
GAPVD1-213ENST00000469498 BACE1P56817 501 aa9.77□□□□□ -0.85
GAPVD1-213ENST00000469498 KLRC3Q07444 240 aa9.77□□□□□ -0.85
GAPVD1-213ENST00000469498 SCRN1Q12765 414 aa9.77□□□□□ -0.85
GAPVD1-213ENST00000469498 GRM1Q13255 1194 aa9.77□□□□□ -0.85
GAPVD1-213ENST00000469498 BECN1Q14457 450 aa9.77□□□□□ -0.85
GAPVD1-213ENST00000469498 FAM83BQ5T0W9 1011 aa9.77□□□□□ -0.85
GAPVD1-213ENST00000469498 USP17L2Q6R6M4 530 aa9.77□□□□□ -0.85
GAPVD1-213ENST00000469498 GADL1Q6ZQY3 521 aa9.77□□□□□ -0.85
GAPVD1-213ENST00000469498 KCTD1Q719H9 257 aa9.77□□□□□ -0.85
GAPVD1-213ENST00000469498 SAPCD2Q86UD0 394 aa9.77□□□□□ -0.85
GAPVD1-213ENST00000469498 RASAL3Q86YV0 1011 aa9.77□□□□□ -0.85
GAPVD1-213ENST00000469498 STAG2Q8N3U4 1231 aa9.77□□□□□ -0.85
GAPVD1-213ENST00000469498 IL27Q8NEV9 243 aa9.77□□□□□ -0.85
GAPVD1-213ENST00000469498 DCAF4Q8WV16 495 aa9.77□□□□□ -0.85
GAPVD1-213ENST00000469498 CPVLQ9H3G5 476 aa9.77□□□□□ -0.85
GAPVD1-213ENST00000469498 GPCPD1Q9NPB8 672 aa9.77□□□□□ -0.85
GAPVD1-213ENST00000469498 ZSWIM8A7E2V4 1837 aa9.77□□□□□ -0.85
GAPVD1-213ENST00000469498 MYH7BA7E2Y1 1941 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms