RNA–Protein interactions for RNA: ENST00000469334.5

SMARCE1-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 2,128 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-207ENST00000469334 ARID4AP29374 1257 aaPredicted RBP10.04□□□□□ -0.8
SMARCE1-207ENST00000469334 HDGFP51858 240 aaKnown RBP10.04□□□□□ -0.8
SMARCE1-207ENST00000469334 PSMD2Q13200 908 aa10.04□□□□□ -0.8
SMARCE1-207ENST00000469334 SEPT2Q15019 361 aa10.04□□□□□ -0.8
SMARCE1-207ENST00000469334 IMMTQ16891 758 aaKnown RBP10.04□□□□□ -0.8
SMARCE1-207ENST00000469334 C8orf74Q6P047 294 aa10.04□□□□□ -0.8
SMARCE1-207ENST00000469334 CCDC129Q6ZRS4 1044 aa10.04□□□□□ -0.8
SMARCE1-207ENST00000469334 CREG2Q8IUH2 290 aa10.04□□□□□ -0.8
SMARCE1-207ENST00000469334 EIF1ADQ8N9N8 165 aaKnown RBP10.04□□□□□ -0.8
SMARCE1-207ENST00000469334 CCDC63Q8NA47 563 aa10.04□□□□□ -0.8
SMARCE1-207ENST00000469334 SPATA4Q8NEY3 305 aa10.04□□□□□ -0.8
SMARCE1-207ENST00000469334 RBM33Q96EV2 1170 aaKnown RBP10.04□□□□□ -0.8
SMARCE1-207ENST00000469334 HAUS7Q99871 368 aa10.04□□□□□ -0.8
SMARCE1-207ENST00000469334 TMBIM4Q9HC24 238 aa10.04□□□□□ -0.8
SMARCE1-207ENST00000469334 JADE2Q9NQC1 790 aa10.04□□□□□ -0.8
SMARCE1-207ENST00000469334 RGL1Q9NZL6 768 aa10.04□□□□□ -0.8
SMARCE1-207ENST00000469334 TRIM10Q9UDY6 481 aa10.04□□□□□ -0.8
SMARCE1-207ENST00000469334 SWAP70Q9UH65 585 aa10.04□□□□□ -0.8
SMARCE1-207ENST00000469334 SERTAD1Q9UHV2 236 aa10.04□□□□□ -0.8
SMARCE1-207ENST00000469334 PCDHGC5Q9Y5F6 944 aa10.04□□□□□ -0.8
SMARCE1-207ENST00000469334 ABCC12Q96J65 1359 aa10.04□□□□□ -0.8
SMARCE1-207ENST00000469334 NWD2Q9ULI1 1742 aa10.04□□□□□ -0.8
SMARCE1-207ENST00000469334 OPLAHO14841 1288 aa10.03□□□□□ -0.8
SMARCE1-207ENST00000469334 ACTN4O43707 911 aaKnown RBP10.03□□□□□ -0.8
SMARCE1-207ENST00000469334 CCND1P24385 295 aa10.03□□□□□ -0.8
SMARCE1-207ENST00000469334 MAGEA8P43361 318 aa10.03□□□□□ -0.8
SMARCE1-207ENST00000469334 CCNG1P51959 295 aa10.03□□□□□ -0.8
SMARCE1-207ENST00000469334 COPB1P53618 953 aaKnown RBP10.03□□□□□ -0.8
SMARCE1-207ENST00000469334 TEFQ10587 303 aa10.03□□□□□ -0.8
SMARCE1-207ENST00000469334 IFI16Q16666 785 aaKnown RBP10.03□□□□□ -0.8
SMARCE1-207ENST00000469334 ZNF827Q17R98 1081 aa10.03□□□□□ -0.8
SMARCE1-207ENST00000469334 HIBCHQ6NVY1 386 aaPredicted RBP10.03□□□□□ -0.8
SMARCE1-207ENST00000469334 MTHFD1LQ6UB35 978 aa10.03□□□□□ -0.8
SMARCE1-207ENST00000469334 CACNA2D4Q7Z3S7 1137 aa10.03□□□□□ -0.8
SMARCE1-207ENST00000469334 KBTBD3Q8NAB2 608 aa10.03□□□□□ -0.8
SMARCE1-207ENST00000469334 NUP133Q8WUM0 1156 aa10.03□□□□□ -0.8
SMARCE1-207ENST00000469334 TBC1D31Q96DN5 1066 aa10.03□□□□□ -0.8
SMARCE1-207ENST00000469334 TSC22D3Q99576 134 aa10.03□□□□□ -0.8
SMARCE1-207ENST00000469334 NDST4Q9H3R1 872 aa10.03□□□□□ -0.8
SMARCE1-207ENST00000469334 GDF3Q9NR23 364 aa10.03□□□□□ -0.8
SMARCE1-207ENST00000469334 SLC5A4Q9NY91 659 aa10.03□□□□□ -0.8
SMARCE1-207ENST00000469334 ZFATQ9P243 1243 aa10.03□□□□□ -0.8
SMARCE1-207ENST00000469334 SLC12A4Q9UP95 1085 aa10.03□□□□□ -0.8
SMARCE1-207ENST00000469334 HYOU1Q9Y4L1 999 aa10.03□□□□□ -0.8
SMARCE1-207ENST00000469334 CCDC61Q9Y6R9 512 aa10.03□□□□□ -0.8
SMARCE1-207ENST00000469334 MYH7P12883 1935 aa10.03□□□□□ -0.8
SMARCE1-207ENST00000469334 KLF18A0A0U1RQI7 1052 aa10.03□□□□□ -0.8
SMARCE1-207ENST00000469334 A0A1W2PQC6 194 aa10.03□□□□□ -0.8
SMARCE1-207ENST00000469334 IMPDH2P12268 514 aa10.03□□□□□ -0.8
SMARCE1-207ENST00000469334 PTPREP23469 700 aa10.03□□□□□ -0.8
SMARCE1-207ENST00000469334 LAMB3Q13751 1172 aa10.03□□□□□ -0.8
SMARCE1-207ENST00000469334 ZNF268Q14587 947 aaPredicted RBP10.03□□□□□ -0.8
SMARCE1-207ENST00000469334 KRT31Q15323 416 aa10.03□□□□□ -0.8
SMARCE1-207ENST00000469334 MEA1Q16626 185 aa10.03□□□□□ -0.8
SMARCE1-207ENST00000469334 AGBL2Q5U5Z8 902 aa10.03□□□□□ -0.8
SMARCE1-207ENST00000469334 KRT40Q6A162 431 aa10.03□□□□□ -0.8
SMARCE1-207ENST00000469334 GALNT15Q8N3T1 639 aa10.03□□□□□ -0.8
SMARCE1-207ENST00000469334 ZNF570Q96NI8 536 aa10.03□□□□□ -0.8
SMARCE1-207ENST00000469334 GSDMAQ96QA5 445 aa10.03□□□□□ -0.8
SMARCE1-207ENST00000469334 ALG1Q9BT22 464 aa10.03□□□□□ -0.8
SMARCE1-207ENST00000469334 YIPF3Q9GZM5 350 aa10.03□□□□□ -0.8
SMARCE1-207ENST00000469334 TAF1DQ9H5J8 278 aaPredicted RBP10.03□□□□□ -0.8
SMARCE1-207ENST00000469334 PPANQ9NQ55 473 aaKnown RBP10.03□□□□□ -0.8
SMARCE1-207ENST00000469334 PLCB1Q9NQ66 1216 aa10.03□□□□□ -0.8
SMARCE1-207ENST00000469334 PAPOLBQ9NRJ5 636 aaKnown RBP10.03□□□□□ -0.8
SMARCE1-207ENST00000469334 RNF14Q9UBS8 474 aa10.03□□□□□ -0.8
SMARCE1-207ENST00000469334 SLC12A6Q9UHW9 1150 aa10.03□□□□□ -0.8
SMARCE1-207ENST00000469334 HPS5Q9UPZ3 1129 aa10.03□□□□□ -0.8
SMARCE1-207ENST00000469334 CPDO75976 1380 aa10.02□□□□□ -0.81
SMARCE1-207ENST00000469334 STXBP3O00186 592 aa10.02□□□□□ -0.81
SMARCE1-207ENST00000469334 TACC1O75410 805 aa10.02□□□□□ -0.81
SMARCE1-207ENST00000469334 LINGO3P0C6S8 592 aa10.02□□□□□ -0.81
SMARCE1-207ENST00000469334 HSPA9P38646 679 aaKnown RBP10.02□□□□□ -0.81
SMARCE1-207ENST00000469334 PAFAH1B1P43034 410 aa10.02□□□□□ -0.81
SMARCE1-207ENST00000469334 RBM5P52756 815 aaKnown RBP eCLIP10.02□□□□□ -0.81
SMARCE1-207ENST00000469334 MTA1Q13330 715 aa10.02□□□□□ -0.81
SMARCE1-207ENST00000469334 BYSLQ13895 437 aaKnown RBP10.02□□□□□ -0.81
SMARCE1-207ENST00000469334 PPP1R7Q15435 360 aa10.02□□□□□ -0.81
SMARCE1-207ENST00000469334 CDC37Q16543 378 aaPredicted RBP10.02□□□□□ -0.81
SMARCE1-207ENST00000469334 SPRED3Q2MJR0 410 aa10.02□□□□□ -0.81
SMARCE1-207ENST00000469334 CCDC57Q2TAC2 916 aa10.02□□□□□ -0.81
SMARCE1-207ENST00000469334 THEMIS2Q5TEJ8 643 aa10.02□□□□□ -0.81
SMARCE1-207ENST00000469334 GGT6Q6P531 493 aa10.02□□□□□ -0.81
SMARCE1-207ENST00000469334 RUFY4Q6ZNE9 571 aa10.02□□□□□ -0.81
SMARCE1-207ENST00000469334 RBM12BQ8IXT5 1001 aaKnown RBP10.02□□□□□ -0.81
SMARCE1-207ENST00000469334 NUDT16Q96DE0 195 aaKnown RBP10.02□□□□□ -0.81
SMARCE1-207ENST00000469334 ZNHIT6Q9NWK9 470 aaKnown RBP10.02□□□□□ -0.81
SMARCE1-207ENST00000469334 LUC7L2Q9Y383 392 aaKnown RBP10.02□□□□□ -0.81
SMARCE1-207ENST00000469334 CCT8L1PA6NM43 557 aa10.01□□□□□ -0.81
SMARCE1-207ENST00000469334 ZNF185O15231 689 aa10.01□□□□□ -0.81
SMARCE1-207ENST00000469334 POLR2DO15514 142 aaKnown RBP10.01□□□□□ -0.81
SMARCE1-207ENST00000469334 VIMP08670 466 aaKnown RBP10.01□□□□□ -0.81
SMARCE1-207ENST00000469334 TRIM29Q14134 588 aa10.01□□□□□ -0.81
SMARCE1-207ENST00000469334 ITIH4Q14624 930 aa10.01□□□□□ -0.81
SMARCE1-207ENST00000469334 TTF1Q15361 905 aaPredicted RBP10.01□□□□□ -0.81
SMARCE1-207ENST00000469334 CMPK2Q5EBM0 449 aa10.01□□□□□ -0.81
SMARCE1-207ENST00000469334 SPATA21Q7Z572 469 aa10.01□□□□□ -0.81
SMARCE1-207ENST00000469334 TRIM74Q86UV6 250 aa10.01□□□□□ -0.81
SMARCE1-207ENST00000469334 TRIM73Q86UV7 250 aa10.01□□□□□ -0.81
SMARCE1-207ENST00000469334 ANKS4BQ8N8V4 417 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms