RNA–Protein interactions for RNA: ENST00000468839.1

CRAMP1-206, Transcript of cramped chromatin regulator homolog 1, humanhuman

TSL 3

Gene CRAMP1, Length 451 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRAMP1-206ENST00000468839 GOPCQ9HD26 462 aa17.25■□□□□ 0.35
CRAMP1-206ENST00000468839 PCDHA4Q9UN74 947 aa17.25■□□□□ 0.35
CRAMP1-206ENST00000468839 MORC2Q9Y6X9 1032 aaPredicted RBP17.25■□□□□ 0.35
CRAMP1-206ENST00000468839 SMCHD1A6NHR9 2005 aa17.25■□□□□ 0.35
CRAMP1-206ENST00000468839 PARP14Q460N5 1801 aa17.24■□□□□ 0.35
CRAMP1-206ENST00000468839 GOLGA6L4A6NEF3 574 aa17.24■□□□□ 0.35
CRAMP1-206ENST00000468839 GLTPD2A6NH11 291 aa17.24■□□□□ 0.35
CRAMP1-206ENST00000468839 M0R2N6 131 aa17.24■□□□□ 0.35
CRAMP1-206ENST00000468839 ECE1P42892 770 aa17.24■□□□□ 0.35
CRAMP1-206ENST00000468839 TOB1P50616 345 aaPredicted RBP17.24■□□□□ 0.35
CRAMP1-206ENST00000468839 PTPAQ15257 358 aa17.24■□□□□ 0.35
CRAMP1-206ENST00000468839 SUPT20HL1Q3ZLR7 823 aa17.24■□□□□ 0.35
CRAMP1-206ENST00000468839 USP50Q70EL3 339 aaPredicted RBP17.24■□□□□ 0.35
CRAMP1-206ENST00000468839 HEATR3Q7Z4Q2 680 aa17.24■□□□□ 0.35
CRAMP1-206ENST00000468839 VCPKMTQ9H867 229 aa17.24■□□□□ 0.35
CRAMP1-206ENST00000468839 PAPPA2Q9BXP8 1791 aa17.23■□□□□ 0.35
CRAMP1-206ENST00000468839 SPTLC2O15270 562 aa17.23■□□□□ 0.35
CRAMP1-206ENST00000468839 PLA2G6O60733 806 aa17.23■□□□□ 0.35
CRAMP1-206ENST00000468839 PPP6R2O75170 966 aa17.23■□□□□ 0.35
CRAMP1-206ENST00000468839 GSE1Q14687 1217 aa17.23■□□□□ 0.35
CRAMP1-206ENST00000468839 SF3A1Q15459 793 aaKnown RBP17.23■□□□□ 0.35
CRAMP1-206ENST00000468839 PPP1R18Q6NYC8 613 aa17.23■□□□□ 0.35
CRAMP1-206ENST00000468839 CAVIN1Q6NZI2 390 aaKnown RBP17.23■□□□□ 0.35
CRAMP1-206ENST00000468839 HOMER1Q86YM7 354 aa17.23■□□□□ 0.35
CRAMP1-206ENST00000468839 ZC3H15Q8WU90 426 aaKnown RBP17.23■□□□□ 0.35
CRAMP1-206ENST00000468839 SYAP1Q96A49 352 aaPredicted RBP17.23■□□□□ 0.35
CRAMP1-206ENST00000468839 EIF4ENIF1Q9NRA8 985 aaKnown RBP17.23■□□□□ 0.35
CRAMP1-206ENST00000468839 TMEM63CQ9P1W3 806 aa17.23■□□□□ 0.35
CRAMP1-206ENST00000468839 MYH7BA7E2Y1 1941 aa17.22■□□□□ 0.35
CRAMP1-206ENST00000468839 USP17L10C9JJH3 530 aa17.22■□□□□ 0.35
CRAMP1-206ENST00000468839 ZBTB5O15062 677 aa17.22■□□□□ 0.35
CRAMP1-206ENST00000468839 GNA11P29992 359 aa17.22■□□□□ 0.35
CRAMP1-206ENST00000468839 SLC16A2P36021 539 aa17.22■□□□□ 0.35
CRAMP1-206ENST00000468839 TRAPPC10P48553 1259 aa17.22■□□□□ 0.35
CRAMP1-206ENST00000468839 NAPAP54920 295 aa17.22■□□□□ 0.35
CRAMP1-206ENST00000468839 ADALQ6DHV7 355 aa17.22■□□□□ 0.35
CRAMP1-206ENST00000468839 DCPSQ96C86 337 aaKnown RBP17.22■□□□□ 0.35
CRAMP1-206ENST00000468839 C6orf50Q9HD87 102 aa17.22■□□□□ 0.35
CRAMP1-206ENST00000468839 NOL7Q9UMY1 257 aaKnown RBP17.22■□□□□ 0.35
CRAMP1-206ENST00000468839 PCDHA7Q9UN72 937 aa17.22■□□□□ 0.35
CRAMP1-206ENST00000468839 PTPRFP10586 1907 aa17.21■□□□□ 0.35
CRAMP1-206ENST00000468839 OTOFQ9HC10 1997 aa17.21■□□□□ 0.35
CRAMP1-206ENST00000468839 SSC5DA1L4H1 1573 aa17.21■□□□□ 0.35
CRAMP1-206ENST00000468839 A0A1W2PQ27 194 aa17.21■□□□□ 0.35
CRAMP1-206ENST00000468839 A0A1W2PQ64 194 aa17.21■□□□□ 0.35
CRAMP1-206ENST00000468839 A0A1W2PQD8 194 aa17.21■□□□□ 0.35
CRAMP1-206ENST00000468839 SMCO2A6NFE2 343 aa17.21■□□□□ 0.35
CRAMP1-206ENST00000468839 INPP5BP32019 993 aa17.21■□□□□ 0.35
CRAMP1-206ENST00000468839 EARS2Q5JPH6 523 aaKnown RBP17.21■□□□□ 0.35
CRAMP1-206ENST00000468839 KIAA1755Q5JYT7 1200 aa17.21■□□□□ 0.35
CRAMP1-206ENST00000468839 SYDE2Q5VT97 1194 aa17.21■□□□□ 0.35
CRAMP1-206ENST00000468839 SCYL3Q8IZE3 742 aa17.21■□□□□ 0.35
CRAMP1-206ENST00000468839 JMYQ8N9B5 988 aa17.21■□□□□ 0.35
CRAMP1-206ENST00000468839 KLRG1Q96E93 195 aa17.21■□□□□ 0.35
CRAMP1-206ENST00000468839 WDR18Q9BV38 432 aa17.21■□□□□ 0.35
CRAMP1-206ENST00000468839 GZF1Q9H116 711 aaPredicted RBP17.21■□□□□ 0.35
CRAMP1-206ENST00000468839 TMEM232C9JQI7 657 aa17.2■□□□□ 0.34
CRAMP1-206ENST00000468839 ADAMTS3O15072 1205 aa17.2■□□□□ 0.34
CRAMP1-206ENST00000468839 RAD21O60216 631 aa17.2■□□□□ 0.34
CRAMP1-206ENST00000468839 EPHX2P34913 555 aa17.2■□□□□ 0.34
CRAMP1-206ENST00000468839 NOL9Q5SY16 702 aaKnown RBP17.2■□□□□ 0.34
CRAMP1-206ENST00000468839 PRAMEF18Q5VWM3 479 aa17.2■□□□□ 0.34
CRAMP1-206ENST00000468839 BICD2Q8TD16 824 aa17.2■□□□□ 0.34
CRAMP1-206ENST00000468839 CHURC1Q8WUH1 139 aa17.2■□□□□ 0.34
CRAMP1-206ENST00000468839 NUP88Q99567 741 aaPredicted RBP17.2■□□□□ 0.34
CRAMP1-206ENST00000468839 KIAA1683Q9H0B3 1180 aa17.2■□□□□ 0.34
CRAMP1-206ENST00000468839 PCDHA6Q9UN73 950 aa17.2■□□□□ 0.34
CRAMP1-206ENST00000468839 CEP131Q9UPN4 1083 aa17.2■□□□□ 0.34
CRAMP1-206ENST00000468839 PCDHA8Q9Y5H6 950 aa17.2■□□□□ 0.34
CRAMP1-206ENST00000468839 FAM205CA6NFA0 338 aa17.19■□□□□ 0.34
CRAMP1-206ENST00000468839 TRIM75PA6NK02 468 aa17.19■□□□□ 0.34
CRAMP1-206ENST00000468839 PPP1R11O60927 126 aaPredicted RBP17.19■□□□□ 0.34
CRAMP1-206ENST00000468839 BMP15O95972 392 aa17.19■□□□□ 0.34
CRAMP1-206ENST00000468839 LIG1P18858 919 aa17.19■□□□□ 0.34
CRAMP1-206ENST00000468839 ME1P48163 572 aa17.19■□□□□ 0.34
CRAMP1-206ENST00000468839 ZNF445P59923 1031 aa17.19■□□□□ 0.34
CRAMP1-206ENST00000468839 QRICH1Q2TAL8 776 aa17.19■□□□□ 0.34
CRAMP1-206ENST00000468839 AXDND1Q5T1B0 1012 aaPredicted RBP17.19■□□□□ 0.34
CRAMP1-206ENST00000468839 CCDC183Q5T5S1 534 aa17.19■□□□□ 0.34
CRAMP1-206ENST00000468839 FAM160B2Q86V87 743 aa17.19■□□□□ 0.34
CRAMP1-206ENST00000468839 SULF1Q8IWU6 871 aa17.19■□□□□ 0.34
CRAMP1-206ENST00000468839 LPAR1Q92633 364 aa17.19■□□□□ 0.34
CRAMP1-206ENST00000468839 COA7Q96BR5 231 aa17.19■□□□□ 0.34
CRAMP1-206ENST00000468839 GLIS2Q9BZE0 524 aaPredicted RBP17.19■□□□□ 0.34
CRAMP1-206ENST00000468839 AS3MTQ9HBK9 375 aa17.19■□□□□ 0.34
CRAMP1-206ENST00000468839 FRMD4AQ9P2Q2 1039 aaPredicted RBP17.19■□□□□ 0.34
CRAMP1-206ENST00000468839 PCDHB6Q9Y5E3 794 aa17.19■□□□□ 0.34
CRAMP1-206ENST00000468839 RLFQ13129 1914 aa17.18■□□□□ 0.34
CRAMP1-206ENST00000468839 IQCA1LA6NCM1 817 aa17.18■□□□□ 0.34
CRAMP1-206ENST00000468839 CUTAO60888 179 aa17.18■□□□□ 0.34
CRAMP1-206ENST00000468839 USP2O75604 605 aaPredicted RBP17.18■□□□□ 0.34
CRAMP1-206ENST00000468839 LETM1O95202 739 aaPredicted RBP17.18■□□□□ 0.34
CRAMP1-206ENST00000468839 STAT2P52630 851 aa17.18■□□□□ 0.34
CRAMP1-206ENST00000468839 CDC37Q16543 378 aaPredicted RBP17.18■□□□□ 0.34
CRAMP1-206ENST00000468839 ZSCAN23Q3MJ62 389 aa17.18■□□□□ 0.34
CRAMP1-206ENST00000468839 NOM1Q5C9Z4 860 aaKnown RBP17.18■□□□□ 0.34
CRAMP1-206ENST00000468839 FAM83BQ5T0W9 1011 aa17.18■□□□□ 0.34
CRAMP1-206ENST00000468839 KRT25Q7Z3Z0 450 aa17.18■□□□□ 0.34
CRAMP1-206ENST00000468839 CCAR1Q8IX12 1150 aaKnown RBP17.18■□□□□ 0.34
CRAMP1-206ENST00000468839 WRNIP1Q96S55 665 aa17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms