RNA–Protein interactions for RNA: ENST00000468612.5

NEDD9-207, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 3

Gene NEDD9, Length 809 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-207ENST00000468612 FAM178BQ8IXR5 827 aa13.58□□□□□ -0.24
NEDD9-207ENST00000468612 SSH1Q8WYL5 1049 aa13.58□□□□□ -0.24
NEDD9-207ENST00000468612 UIMC1Q96RL1 719 aa13.58□□□□□ -0.24
NEDD9-207ENST00000468612 NOC4LQ9BVI4 516 aaKnown RBP13.58□□□□□ -0.24
NEDD9-207ENST00000468612 WNT8AQ9H1J5 351 aa13.58□□□□□ -0.24
NEDD9-207ENST00000468612 SNRKQ9NRH2 765 aa13.58□□□□□ -0.24
NEDD9-207ENST00000468612 PARP14Q460N5 1801 aa13.57□□□□□ -0.24
NEDD9-207ENST00000468612 TRIOO75962 3097 aa13.57□□□□□ -0.24
NEDD9-207ENST00000468612 ZBBXA8MT70 800 aa13.57□□□□□ -0.24
NEDD9-207ENST00000468612 CTAGE5O15320 804 aa13.57□□□□□ -0.24
NEDD9-207ENST00000468612 ARHGEF15O94989 841 aa13.57□□□□□ -0.24
NEDD9-207ENST00000468612 CYP2E1P05181 493 aaPredicted RBP13.57□□□□□ -0.24
NEDD9-207ENST00000468612 USP5P45974 858 aa13.57□□□□□ -0.24
NEDD9-207ENST00000468612 PLCD1P51178 756 aa13.57□□□□□ -0.24
NEDD9-207ENST00000468612 GABPAQ06546 454 aa13.57□□□□□ -0.24
NEDD9-207ENST00000468612 TTC6Q86TZ1 520 aa13.57□□□□□ -0.24
NEDD9-207ENST00000468612 RPUSD2Q8IZ73 545 aaKnown RBP13.57□□□□□ -0.24
NEDD9-207ENST00000468612 GJD3Q8N144 294 aa13.57□□□□□ -0.24
NEDD9-207ENST00000468612 ZHX1Q9UKY1 873 aaPredicted RBP13.57□□□□□ -0.24
NEDD9-207ENST00000468612 ZNF318Q5VUA4 2279 aa13.57□□□□□ -0.24
NEDD9-207ENST00000468612 COL11A1P12107 1806 aaPredicted RBP13.56□□□□□ -0.24
NEDD9-207ENST00000468612 LPXNO60711 386 aa13.56□□□□□ -0.24
NEDD9-207ENST00000468612 ALADP13716 330 aa13.56□□□□□ -0.24
NEDD9-207ENST00000468612 NKX3-2P78367 333 aa13.56□□□□□ -0.24
NEDD9-207ENST00000468612 TAP1Q03518 808 aa13.56□□□□□ -0.24
NEDD9-207ENST00000468612 GRB10Q13322 594 aa13.56□□□□□ -0.24
NEDD9-207ENST00000468612 TTLL4Q14679 1199 aa13.56□□□□□ -0.24
NEDD9-207ENST00000468612 GNASQ5JWF2 1037 aa13.56□□□□□ -0.24
NEDD9-207ENST00000468612 ARNTL2Q8WYA1 636 aa13.56□□□□□ -0.24
NEDD9-207ENST00000468612 SPC25Q9HBM1 224 aa13.56□□□□□ -0.24
NEDD9-207ENST00000468612 HDAC5Q9UQL6 1122 aa13.56□□□□□ -0.24
NEDD9-207ENST00000468612 MYO5AQ9Y4I1 1855 aaKnown RBP13.56□□□□□ -0.24
NEDD9-207ENST00000468612 CYP7A1P22680 504 aa13.55□□□□□ -0.24
NEDD9-207ENST00000468612 STAT3P40763 770 aa13.55□□□□□ -0.24
NEDD9-207ENST00000468612 ACVR2BQ13705 512 aa13.55□□□□□ -0.24
NEDD9-207ENST00000468612 CSPP1Q1MSJ5 1256 aa13.55□□□□□ -0.24
NEDD9-207ENST00000468612 CERS3Q8IU89 383 aa13.55□□□□□ -0.24
NEDD9-207ENST00000468612 SIAH1Q8IUQ4 282 aa13.55□□□□□ -0.24
NEDD9-207ENST00000468612 SPICE1Q8N0Z3 855 aa13.55□□□□□ -0.24
NEDD9-207ENST00000468612 AGBL1Q96MI9 1066 aa13.55□□□□□ -0.24
NEDD9-207ENST00000468612 PIH1D3Q9NQM4 214 aaKnown RBP13.55□□□□□ -0.24
NEDD9-207ENST00000468612 ZNF214Q9UL59 606 aaPredicted RBP13.55□□□□□ -0.24
NEDD9-207ENST00000468612 DNAJC25-GNG10A0A024R161 153 aa13.54□□□□□ -0.24
NEDD9-207ENST00000468612 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP13.54□□□□□ -0.24
NEDD9-207ENST00000468612 WDR46O15213 610 aaKnown RBP13.54□□□□□ -0.24
NEDD9-207ENST00000468612 SRGAP3O43295 1099 aa13.54□□□□□ -0.24
NEDD9-207ENST00000468612 COPB2P35606 906 aa13.54□□□□□ -0.24
NEDD9-207ENST00000468612 MTX1Q13505 466 aa13.54□□□□□ -0.24
NEDD9-207ENST00000468612 CCDC144BQ3MJ40 725 aa13.54□□□□□ -0.24
NEDD9-207ENST00000468612 SAMD1Q6SPF0 538 aaPredicted RBP13.54□□□□□ -0.24
NEDD9-207ENST00000468612 ZNF467Q7Z7K2 595 aaPredicted RBP13.54□□□□□ -0.24
NEDD9-207ENST00000468612 MIGA1Q8NAN2 632 aa13.54□□□□□ -0.24
NEDD9-207ENST00000468612 REPS2Q8NFH8 660 aa13.54□□□□□ -0.24
NEDD9-207ENST00000468612 SCLYQ96I15 445 aa13.54□□□□□ -0.24
NEDD9-207ENST00000468612 MEIS3Q99687 375 aa13.54□□□□□ -0.24
NEDD9-207ENST00000468612 VCPKMTQ9H867 229 aa13.54□□□□□ -0.24
NEDD9-207ENST00000468612 TMX2Q9Y320 296 aa13.54□□□□□ -0.24
NEDD9-207ENST00000468612 GRIN2DO15399 1336 aa13.54□□□□□ -0.24
NEDD9-207ENST00000468612 POTEB3A0JP26 581 aa13.53□□□□□ -0.24
NEDD9-207ENST00000468612 VWA5AO00534 786 aa13.53□□□□□ -0.24
NEDD9-207ENST00000468612 MPHOSPH10O00566 681 aaKnown RBP13.53□□□□□ -0.24
NEDD9-207ENST00000468612 B4GALT4O60513 344 aa13.53□□□□□ -0.24
NEDD9-207ENST00000468612 PFKMP08237 780 aa13.53□□□□□ -0.24
NEDD9-207ENST00000468612 EVX2Q03828 476 aa13.53□□□□□ -0.24
NEDD9-207ENST00000468612 LEXMQ3ZCV2 418 aa13.53□□□□□ -0.24
NEDD9-207ENST00000468612 POTEBQ6S5H4 581 aa13.53□□□□□ -0.24
NEDD9-207ENST00000468612 PHOX2BQ99453 314 aa13.53□□□□□ -0.24
NEDD9-207ENST00000468612 SEZ6LQ9BYH1 1024 aa13.53□□□□□ -0.24
NEDD9-207ENST00000468612 TRPV6Q9H1D0 765 aa13.53□□□□□ -0.24
NEDD9-207ENST00000468612 UBE2ZQ9H832 354 aaPredicted RBP13.53□□□□□ -0.24
NEDD9-207ENST00000468612 FBXO28Q9NVF7 368 aa13.53□□□□□ -0.24
NEDD9-207ENST00000468612 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.53□□□□□ -0.24
NEDD9-207ENST00000468612 LMCD1Q9NZU5 365 aa13.53□□□□□ -0.24
NEDD9-207ENST00000468612 COL4A4P53420 1690 aaPredicted RBP13.53□□□□□ -0.24
NEDD9-207ENST00000468612 C5orf42Q9H799 3197 aa13.52□□□□□ -0.24
NEDD9-207ENST00000468612 DCXO43602 365 aa13.52□□□□□ -0.25
NEDD9-207ENST00000468612 ST18O60284 1047 aa13.52□□□□□ -0.25
NEDD9-207ENST00000468612 CABYRO75952 493 aa13.52□□□□□ -0.25
NEDD9-207ENST00000468612 SSTR3P32745 418 aaPredicted RBP13.52□□□□□ -0.25
NEDD9-207ENST00000468612 ZAP70P43403 619 aa13.52□□□□□ -0.25
NEDD9-207ENST00000468612 BEX3Q00994 111 aa13.52□□□□□ -0.25
NEDD9-207ENST00000468612 ITGA7Q13683 1181 aa13.52□□□□□ -0.25
NEDD9-207ENST00000468612 TTC39AQ5SRH9 613 aa13.52□□□□□ -0.25
NEDD9-207ENST00000468612 CXCL17Q6UXB2 119 aa13.52□□□□□ -0.25
NEDD9-207ENST00000468612 TMEM179Q6ZVK1 233 aa13.52□□□□□ -0.25
NEDD9-207ENST00000468612 SPRED2Q7Z698 418 aa13.52□□□□□ -0.25
NEDD9-207ENST00000468612 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.52□□□□□ -0.25
NEDD9-207ENST00000468612 PHOSPHO2Q8TCD6 241 aa13.52□□□□□ -0.25
NEDD9-207ENST00000468612 SLC9A7Q96T83 725 aa13.52□□□□□ -0.25
NEDD9-207ENST00000468612 ABHD16BQ9H3Z7 469 aa13.52□□□□□ -0.25
NEDD9-207ENST00000468612 PPP1R9AQ9ULJ8 1098 aa13.52□□□□□ -0.25
NEDD9-207ENST00000468612 ZDBF2Q9HCK1 2354 aa13.52□□□□□ -0.25
NEDD9-207ENST00000468612 ASTN1O14525 1302 aa13.51□□□□□ -0.25
NEDD9-207ENST00000468612 CLEC10AQ8IUN9 316 aa13.51□□□□□ -0.25
NEDD9-207ENST00000468612 MAGEB6Q8N7X4 407 aa13.51□□□□□ -0.25
NEDD9-207ENST00000468612 ANKS1AQ92625 1134 aa13.51□□□□□ -0.25
NEDD9-207ENST00000468612 ZNF512BQ96KM6 892 aaPredicted RBP13.51□□□□□ -0.25
NEDD9-207ENST00000468612 FGD4Q96M96 766 aa13.51□□□□□ -0.25
NEDD9-207ENST00000468612 KATNBL1Q9H079 304 aa13.51□□□□□ -0.25
NEDD9-207ENST00000468612 ARHGEF10LQ9HCE6 1279 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms