RNA–Protein interactions for RNA: ENST00000468565.1

COL27A1-203, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 2

Gene COL27A1, Length 1,946 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-203ENST00000468565 CRISPLD2Q9H0B8 497 aa17.08■□□□□ 0.32
COL27A1-203ENST00000468565 FEM1BQ9UK73 627 aa17.08■□□□□ 0.32
COL27A1-203ENST00000468565 ZNF214Q9UL59 606 aaPredicted RBP17.08■□□□□ 0.32
COL27A1-203ENST00000468565 PRKAR2AP13861 404 aaKnown RBP17.07■□□□□ 0.32
COL27A1-203ENST00000468565 NT5C2P49902 561 aa17.07■□□□□ 0.32
COL27A1-203ENST00000468565 NBR1Q14596 966 aa17.07■□□□□ 0.32
COL27A1-203ENST00000468565 CCL14Q16627 93 aa17.07■□□□□ 0.32
COL27A1-203ENST00000468565 AKNAD1Q5T1N1 836 aa17.07■□□□□ 0.32
COL27A1-203ENST00000468565 GMCL1Q96IK5 515 aa17.07■□□□□ 0.32
COL27A1-203ENST00000468565 NBPF3Q9H094 633 aa17.07■□□□□ 0.32
COL27A1-203ENST00000468565 RNF41Q9H4P4 317 aaPredicted RBP17.07■□□□□ 0.32
COL27A1-203ENST00000468565 TOMM22Q9NS69 142 aa17.07■□□□□ 0.32
COL27A1-203ENST00000468565 TCP11L1Q9NUJ3 509 aa17.07■□□□□ 0.32
COL27A1-203ENST00000468565 STX8Q9UNK0 236 aa17.07■□□□□ 0.32
COL27A1-203ENST00000468565 RAD50Q92878 1312 aa17.07■□□□□ 0.32
COL27A1-203ENST00000468565 BMP3P12645 472 aa17.06■□□□□ 0.32
COL27A1-203ENST00000468565 STAT3P40763 770 aa17.06■□□□□ 0.32
COL27A1-203ENST00000468565 HAND2P61296 217 aa17.06■□□□□ 0.32
COL27A1-203ENST00000468565 MFSD6Q6ZSS7 791 aa17.06■□□□□ 0.32
COL27A1-203ENST00000468565 UBE2Q1Q7Z7E8 422 aa17.06■□□□□ 0.32
COL27A1-203ENST00000468565 UPF2Q9HAU5 1272 aaKnown RBP17.06■□□□□ 0.32
COL27A1-203ENST00000468565 NMT2O60551 498 aa17.06■□□□□ 0.32
COL27A1-203ENST00000468565 ADORA2AP29274 412 aa17.06■□□□□ 0.32
COL27A1-203ENST00000468565 PRPF38BQ5VTL8 546 aaKnown RBP17.06■□□□□ 0.32
COL27A1-203ENST00000468565 ZNF213O14771 459 aa17.05■□□□□ 0.32
COL27A1-203ENST00000468565 ATP2A1O14983 1001 aa17.05■□□□□ 0.32
COL27A1-203ENST00000468565 CACNB2Q08289 660 aaPredicted RBP17.05■□□□□ 0.32
COL27A1-203ENST00000468565 RRP12Q5JTH9 1297 aaKnown RBP17.05■□□□□ 0.32
COL27A1-203ENST00000468565 MFSD14CQ5VZR4 134 aa17.05■□□□□ 0.32
COL27A1-203ENST00000468565 TBC1D10CQ8IV04 446 aa17.05■□□□□ 0.32
COL27A1-203ENST00000468565 NPLOC4Q8TAT6 608 aa17.05■□□□□ 0.32
COL27A1-203ENST00000468565 TEX13BQ9BXU2 312 aa17.05■□□□□ 0.32
COL27A1-203ENST00000468565 SLC5A4Q9NY91 659 aa17.05■□□□□ 0.32
COL27A1-203ENST00000468565 FLRT1Q9NZU1 646 aa17.05■□□□□ 0.32
COL27A1-203ENST00000468565 PLA2G6O60733 806 aa17.04■□□□□ 0.32
COL27A1-203ENST00000468565 IGHA2P01877 340 aa17.04■□□□□ 0.32
COL27A1-203ENST00000468565 TFRCP02786 760 aaKnown RBP17.04■□□□□ 0.32
COL27A1-203ENST00000468565 FDX1P10109 184 aa17.04■□□□□ 0.32
COL27A1-203ENST00000468565 FCER1AP12319 257 aa17.04■□□□□ 0.32
COL27A1-203ENST00000468565 OLFML2BQ68BL8 750 aa17.04■□□□□ 0.32
COL27A1-203ENST00000468565 DPP9Q86TI2 863 aa17.04■□□□□ 0.32
COL27A1-203ENST00000468565 CTNNA3Q9UI47 895 aa17.04■□□□□ 0.32
COL27A1-203ENST00000468565 ZBED4O75132 1171 aa17.04■□□□□ 0.32
COL27A1-203ENST00000468565 FARP2O94887 1054 aaPredicted RBP17.04■□□□□ 0.32
COL27A1-203ENST00000468565 SLC1A4P43007 532 aa17.04■□□□□ 0.32
COL27A1-203ENST00000468565 FAM160B2Q86V87 743 aa17.04■□□□□ 0.32
COL27A1-203ENST00000468565 ANKLE1Q8NAG6 615 aa17.04■□□□□ 0.32
COL27A1-203ENST00000468565 RUFY2Q8WXA3 655 aa17.04■□□□□ 0.32
COL27A1-203ENST00000468565 KIFC2Q96AC6 838 aa17.04■□□□□ 0.32
COL27A1-203ENST00000468565 SLC38A10Q9HBR0 1119 aa17.04■□□□□ 0.32
COL27A1-203ENST00000468565 STAT2P52630 851 aa17.03■□□□□ 0.32
COL27A1-203ENST00000468565 OAZ1P54368 228 aa17.03■□□□□ 0.32
COL27A1-203ENST00000468565 CHURC1Q8WUH1 139 aa17.03■□□□□ 0.32
COL27A1-203ENST00000468565 ESR2Q92731 530 aa17.03■□□□□ 0.32
COL27A1-203ENST00000468565 IL25Q9H293 177 aa17.03■□□□□ 0.32
COL27A1-203ENST00000468565 CTDP1Q9Y5B0 961 aaPredicted RBP17.03■□□□□ 0.32
COL27A1-203ENST00000468565 NEDD4P46934 1319 aa17.02■□□□□ 0.32
COL27A1-203ENST00000468565 TMEM232C9JQI7 657 aa17.02■□□□□ 0.32
COL27A1-203ENST00000468565 COBLO75128 1261 aa17.02■□□□□ 0.32
COL27A1-203ENST00000468565 TOP1P11387 765 aaKnown RBP17.02■□□□□ 0.32
COL27A1-203ENST00000468565 MCCP23508 829 aa17.02■□□□□ 0.32
COL27A1-203ENST00000468565 CHMLP26374 656 aa17.02■□□□□ 0.32
COL27A1-203ENST00000468565 IMMTQ16891 758 aaKnown RBP17.02■□□□□ 0.32
COL27A1-203ENST00000468565 SNRNP48Q6IEG0 339 aaKnown RBP17.02■□□□□ 0.32
COL27A1-203ENST00000468565 RCSD1Q6JBY9 416 aa17.02■□□□□ 0.32
COL27A1-203ENST00000468565 TTC14Q96N46 770 aa17.02■□□□□ 0.32
COL27A1-203ENST00000468565 MMP19Q99542 508 aa17.02■□□□□ 0.32
COL27A1-203ENST00000468565 ALPK3Q96L96 1907 aa17.02■□□□□ 0.31
COL27A1-203ENST00000468565 ABCB7O75027 752 aa17.02■□□□□ 0.31
COL27A1-203ENST00000468565 CCND3P30281 292 aaPredicted RBP17.02■□□□□ 0.31
COL27A1-203ENST00000468565 KCTD2Q14681 263 aa17.02■□□□□ 0.31
COL27A1-203ENST00000468565 DCAF4Q8WV16 495 aa17.02■□□□□ 0.31
COL27A1-203ENST00000468565 OGDHLQ9ULD0 1010 aa17.02■□□□□ 0.31
COL27A1-203ENST00000468565 DHX30Q7L2E3 1194 aaKnown RBP eCLIP17.01■□□□□ 0.31
COL27A1-203ENST00000468565 TMEM47Q9BQJ4 181 aa17.01■□□□□ 0.31
COL27A1-203ENST00000468565 HTATIP2Q9BUP3 242 aa17.01■□□□□ 0.31
COL27A1-203ENST00000468565 SEC24BO95487 1268 aa17■□□□□ 0.31
COL27A1-203ENST00000468565 CCDC178Q5BJE1 867 aa17■□□□□ 0.31
COL27A1-203ENST00000468565 KCTD1Q719H9 257 aa17■□□□□ 0.31
COL27A1-203ENST00000468565 CPXCR1Q8N123 301 aa17■□□□□ 0.31
COL27A1-203ENST00000468565 MAML3Q96JK9 1138 aa17■□□□□ 0.31
COL27A1-203ENST00000468565 ISY1Q9ULR0 285 aaKnown RBP17■□□□□ 0.31
COL27A1-203ENST00000468565 DIS3Q9Y2L1 958 aaKnown RBP17■□□□□ 0.31
COL27A1-203ENST00000468565 RIPK3Q9Y572 518 aa17■□□□□ 0.31
COL27A1-203ENST00000468565 SMCHD1A6NHR9 2005 aa17■□□□□ 0.31
COL27A1-203ENST00000468565 CYP2C19P33261 490 aa17■□□□□ 0.31
COL27A1-203ENST00000468565 RAVER2Q9HCJ3 691 aaKnown RBP17■□□□□ 0.31
COL27A1-203ENST00000468565 MSCO60682 206 aa16.99■□□□□ 0.31
COL27A1-203ENST00000468565 CYBAP13498 195 aa16.99■□□□□ 0.31
COL27A1-203ENST00000468565 IKQ13123 557 aaPredicted RBP16.99■□□□□ 0.31
COL27A1-203ENST00000468565 ZNF792Q3KQV3 632 aa16.99■□□□□ 0.31
COL27A1-203ENST00000468565 LHX8Q68G74 356 aa16.99■□□□□ 0.31
COL27A1-203ENST00000468565 DGKHQ86XP1 1220 aa16.99■□□□□ 0.31
COL27A1-203ENST00000468565 CHST13Q8NET6 341 aa16.99■□□□□ 0.31
COL27A1-203ENST00000468565 KRT23Q9C075 422 aa16.99■□□□□ 0.31
COL27A1-203ENST00000468565 CNNM2Q9H8M5 875 aa16.99■□□□□ 0.31
COL27A1-203ENST00000468565 FBXO40Q9UH90 709 aa16.99■□□□□ 0.31
COL27A1-203ENST00000468565 MCM3APO60318 1980 aa16.98■□□□□ 0.31
COL27A1-203ENST00000468565 BECN1Q14457 450 aa16.98■□□□□ 0.31
COL27A1-203ENST00000468565 RASGRP2Q7LDG7 609 aa16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms