RNA–Protein interactions for RNA: ENST00000467707.1

GAPVD1-211, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 3

Gene GAPVD1, Length 787 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-211ENST00000467707 KIAA0907Q7Z7F0 614 aaPredicted RBP7.35□□□□□ -1.23
GAPVD1-211ENST00000467707 SCUBE1Q8IWY4 988 aa7.35□□□□□ -1.23
GAPVD1-211ENST00000467707 SHKBP1Q8TBC3 707 aa7.35□□□□□ -1.23
GAPVD1-211ENST00000467707 MRGPRX3Q96LB0 322 aa7.35□□□□□ -1.23
GAPVD1-211ENST00000467707 CDC6Q99741 560 aa7.35□□□□□ -1.23
GAPVD1-211ENST00000467707 ARHGEF4Q9NR80 690 aa7.35□□□□□ -1.23
GAPVD1-211ENST00000467707 GFOD1Q9NXC2 390 aa7.35□□□□□ -1.23
GAPVD1-211ENST00000467707 LEMD3Q9Y2U8 911 aa7.35□□□□□ -1.23
GAPVD1-211ENST00000467707 WDR64B1ANS9 1081 aa7.34□□□□□ -1.23
GAPVD1-211ENST00000467707 SRFP11831 508 aa7.34□□□□□ -1.23
GAPVD1-211ENST00000467707 ITIH2P19823 946 aa7.34□□□□□ -1.23
GAPVD1-211ENST00000467707 CWF19L1Q69YN2 538 aaKnown RBP7.34□□□□□ -1.23
GAPVD1-211ENST00000467707 ADCY4Q8NFM4 1077 aa7.34□□□□□ -1.23
GAPVD1-211ENST00000467707 NOL6Q9H6R4 1146 aaKnown RBP7.34□□□□□ -1.23
GAPVD1-211ENST00000467707 KANSL2Q9H9L4 492 aa7.34□□□□□ -1.23
GAPVD1-211ENST00000467707 PLAAQ9Y263 795 aa7.34□□□□□ -1.23
GAPVD1-211ENST00000467707 PRKAB1Q9Y478 270 aa7.34□□□□□ -1.23
GAPVD1-211ENST00000467707 DNAJC25-GNG10A0A024R161 153 aa7.33□□□□□ -1.24
GAPVD1-211ENST00000467707 ANKRD62A6NC57 917 aa7.33□□□□□ -1.24
GAPVD1-211ENST00000467707 PRR33A8MZF0 331 aa7.33□□□□□ -1.24
GAPVD1-211ENST00000467707 PRAMEF1O95521 474 aa7.33□□□□□ -1.24
GAPVD1-211ENST00000467707 IGHA1P01876 353 aa7.33□□□□□ -1.24
GAPVD1-211ENST00000467707 CAPNS1P04632 268 aa7.33□□□□□ -1.24
GAPVD1-211ENST00000467707 CEACAM5P06731 702 aa7.33□□□□□ -1.24
GAPVD1-211ENST00000467707 HOXC12P31275 282 aa7.33□□□□□ -1.24
GAPVD1-211ENST00000467707 AMPD2Q01433 879 aa7.33□□□□□ -1.24
GAPVD1-211ENST00000467707 POU4F1Q01851 419 aa7.33□□□□□ -1.24
GAPVD1-211ENST00000467707 SNW1Q13573 536 aaKnown RBP7.33□□□□□ -1.24
GAPVD1-211ENST00000467707 NKAPLQ5M9Q1 402 aa7.33□□□□□ -1.24
GAPVD1-211ENST00000467707 RNF187Q5TA31 235 aaPredicted RBP7.33□□□□□ -1.24
GAPVD1-211ENST00000467707 TMC3Q7Z5M5 1100 aa7.33□□□□□ -1.24
GAPVD1-211ENST00000467707 BRF1Q92994 677 aa7.33□□□□□ -1.24
GAPVD1-211ENST00000467707 DHRS4Q9BTZ2 278 aa7.33□□□□□ -1.24
GAPVD1-211ENST00000467707 HDAC8Q9BY41 377 aa7.33□□□□□ -1.24
GAPVD1-211ENST00000467707 SNX11Q9Y5W9 270 aa7.33□□□□□ -1.24
GAPVD1-211ENST00000467707 ST14Q9Y5Y6 855 aa7.33□□□□□ -1.24
GAPVD1-211ENST00000467707 SBNO2Q9Y2G9 1366 aa7.33□□□□□ -1.24
GAPVD1-211ENST00000467707 TRBV23-1A0A0A0MS06 115 aa7.32□□□□□ -1.24
GAPVD1-211ENST00000467707 MSTNO14793 375 aa7.32□□□□□ -1.24
GAPVD1-211ENST00000467707 CPP00450 1065 aa7.32□□□□□ -1.24
GAPVD1-211ENST00000467707 ENDOUP21128 410 aaKnown RBP7.32□□□□□ -1.24
GAPVD1-211ENST00000467707 NOP2P46087 812 aaKnown RBP7.32□□□□□ -1.24
GAPVD1-211ENST00000467707 SUMO1P63165 101 aaKnown RBP7.32□□□□□ -1.24
GAPVD1-211ENST00000467707 RBM10P98175 930 aaKnown RBP7.32□□□□□ -1.24
GAPVD1-211ENST00000467707 DOC2BQ14184 412 aa7.32□□□□□ -1.24
GAPVD1-211ENST00000467707 NSMFQ6X4W1 530 aa7.32□□□□□ -1.24
GAPVD1-211ENST00000467707 NKX2-4Q9H2Z4 354 aa7.32□□□□□ -1.24
GAPVD1-211ENST00000467707 CYP26B1Q9NR63 512 aa7.32□□□□□ -1.24
GAPVD1-211ENST00000467707 PIM2Q9P1W9 311 aa7.32□□□□□ -1.24
GAPVD1-211ENST00000467707 WDR3Q9UNX4 943 aaKnown RBP eCLIP7.32□□□□□ -1.24
GAPVD1-211ENST00000467707 TMEM265A0A087WTH1 108 aa7.31□□□□□ -1.24
GAPVD1-211ENST00000467707 CYP26A1O43174 497 aa7.31□□□□□ -1.24
GAPVD1-211ENST00000467707 KCNH1O95259 989 aa7.31□□□□□ -1.24
GAPVD1-211ENST00000467707 PROCP04070 461 aa7.31□□□□□ -1.24
GAPVD1-211ENST00000467707 SCG5P05408 212 aa7.31□□□□□ -1.24
GAPVD1-211ENST00000467707 PABPC1P11940 636 aaKnown RBP7.31□□□□□ -1.24
GAPVD1-211ENST00000467707 FOSL1P15407 271 aa7.31□□□□□ -1.24
GAPVD1-211ENST00000467707 BMP8BP34820 402 aa7.31□□□□□ -1.24
GAPVD1-211ENST00000467707 PPP2R5DQ14738 602 aa7.31□□□□□ -1.24
GAPVD1-211ENST00000467707 IFI16Q16666 785 aaKnown RBP7.31□□□□□ -1.24
GAPVD1-211ENST00000467707 NKPD1Q17RQ9 610 aa7.31□□□□□ -1.24
GAPVD1-211ENST00000467707 GTF2IRD2BQ6EKJ0 949 aa7.31□□□□□ -1.24
GAPVD1-211ENST00000467707 TMPRSS7Q7RTY8 843 aa7.31□□□□□ -1.24
GAPVD1-211ENST00000467707 GTF2IRD2Q86UP8 949 aa7.31□□□□□ -1.24
GAPVD1-211ENST00000467707 TSPYL5Q86VY4 417 aaPredicted RBP7.31□□□□□ -1.24
GAPVD1-211ENST00000467707 ZDHHC13Q8IUH4 622 aa7.31□□□□□ -1.24
GAPVD1-211ENST00000467707 SPACA3Q8IXA5 215 aa7.31□□□□□ -1.24
GAPVD1-211ENST00000467707 SHISA5Q8N114 240 aa7.31□□□□□ -1.24
GAPVD1-211ENST00000467707 NETO1Q8TDF5 533 aa7.31□□□□□ -1.24
GAPVD1-211ENST00000467707 KCTD13Q8WZ19 329 aa7.31□□□□□ -1.24
GAPVD1-211ENST00000467707 KISS1RQ969F8 398 aaPredicted RBP7.31□□□□□ -1.24
GAPVD1-211ENST00000467707 ZDHHC15Q96MV8 337 aa7.31□□□□□ -1.24
GAPVD1-211ENST00000467707 PUS7Q96PZ0 661 aaKnown RBP7.31□□□□□ -1.24
GAPVD1-211ENST00000467707 SPOCK3Q9BQ16 436 aa7.31□□□□□ -1.24
GAPVD1-211ENST00000467707 DUSP15Q9H1R2 295 aaPredicted RBP7.31□□□□□ -1.24
GAPVD1-211ENST00000467707 MRPS23Q9Y3D9 190 aaKnown RBP7.31□□□□□ -1.24
GAPVD1-211ENST00000467707 PPP1R12AO14974 1030 aaPredicted RBP7.3□□□□□ -1.24
GAPVD1-211ENST00000467707 RFPL3O75679 317 aa7.3□□□□□ -1.24
GAPVD1-211ENST00000467707 ASMTLO95671 621 aa7.3□□□□□ -1.24
GAPVD1-211ENST00000467707 MAP4K2Q12851 820 aa7.3□□□□□ -1.24
GAPVD1-211ENST00000467707 RSPO4Q2I0M5 234 aaPredicted RBP7.3□□□□□ -1.24
GAPVD1-211ENST00000467707 BTN2A2Q8WVV5 523 aa7.3□□□□□ -1.24
GAPVD1-211ENST00000467707 MRPL4Q9BYD3 311 aaKnown RBP7.3□□□□□ -1.24
GAPVD1-211ENST00000467707 LRRC4CQ9HCJ2 640 aa7.3□□□□□ -1.24
GAPVD1-211ENST00000467707 RNF112Q9ULX5 631 aa7.3□□□□□ -1.24
GAPVD1-211ENST00000467707 SHISA3A0PJX4 238 aa7.29□□□□□ -1.24
GAPVD1-211ENST00000467707 H0Y8X5 98 aa7.29□□□□□ -1.24
GAPVD1-211ENST00000467707 PLD2O14939 933 aa7.29□□□□□ -1.24
GAPVD1-211ENST00000467707 PRODHO43272 600 aa7.29□□□□□ -1.24
GAPVD1-211ENST00000467707 DYRK3O43781 588 aa7.29□□□□□ -1.24
GAPVD1-211ENST00000467707 HMGB1P09429 215 aaKnown RBP7.29□□□□□ -1.24
GAPVD1-211ENST00000467707 PCBP3P57721 371 aaKnown RBP7.29□□□□□ -1.24
GAPVD1-211ENST00000467707 FNDC3BQ53EP0 1204 aaKnown RBP7.29□□□□□ -1.24
GAPVD1-211ENST00000467707 CDKAL1Q5VV42 579 aa7.29□□□□□ -1.24
GAPVD1-211ENST00000467707 RNF111Q6ZNA4 994 aa7.29□□□□□ -1.24
GAPVD1-211ENST00000467707 FAM181AQ8N9Y4 354 aa7.29□□□□□ -1.24
GAPVD1-211ENST00000467707 LINC00116Q8NCU8 138 aa7.29□□□□□ -1.24
GAPVD1-211ENST00000467707 TCTN2Q96GX1 697 aa7.29□□□□□ -1.24
GAPVD1-211ENST00000467707 EXOC2Q96KP1 924 aa7.29□□□□□ -1.24
GAPVD1-211ENST00000467707 IER2Q9BTL4 223 aa7.29□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms