RNA–Protein interactions for RNA: ENST00000467326.5

VPS50-209, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 4

Gene VPS50, Length 574 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-209ENST00000467326 SYPP08247 313 aa6.07□□□□□ -1.44
VPS50-209ENST00000467326 DUSP4Q13115 394 aa6.07□□□□□ -1.44
VPS50-209ENST00000467326 PPP2R5EQ16537 467 aa6.07□□□□□ -1.44
VPS50-209ENST00000467326 AXDND1Q5T1B0 1012 aaPredicted RBP6.07□□□□□ -1.44
VPS50-209ENST00000467326 LCE5AQ5TCM9 118 aa6.07□□□□□ -1.44
VPS50-209ENST00000467326 FYB2Q5VWT5 728 aa6.07□□□□□ -1.44
VPS50-209ENST00000467326 CRTC3Q6UUV7 619 aa6.07□□□□□ -1.44
VPS50-209ENST00000467326 VPS37DQ86XT2 251 aa6.07□□□□□ -1.44
VPS50-209ENST00000467326 FAM169BQ8N8A8 192 aa6.07□□□□□ -1.44
VPS50-209ENST00000467326 PDZD8Q8NEN9 1154 aa6.07□□□□□ -1.44
VPS50-209ENST00000467326 ZSCAN18Q8TBC5 510 aaPredicted RBP6.07□□□□□ -1.44
VPS50-209ENST00000467326 DHX38Q92620 1227 aaKnown RBP6.07□□□□□ -1.44
VPS50-209ENST00000467326 FAM53CQ9NYF3 392 aa6.07□□□□□ -1.44
VPS50-209ENST00000467326 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.07□□□□□ -1.44
VPS50-209ENST00000467326 A0A1W2PQH9 124 aa6.06□□□□□ -1.44
VPS50-209ENST00000467326 HPXP02790 462 aa6.06□□□□□ -1.44
VPS50-209ENST00000467326 SSBP05455 408 aaKnown RBP eCLIP6.06□□□□□ -1.44
VPS50-209ENST00000467326 RPL10P27635 214 aaKnown RBP6.06□□□□□ -1.44
VPS50-209ENST00000467326 WAPLQ7Z5K2 1190 aa6.06□□□□□ -1.44
VPS50-209ENST00000467326 LINC00116Q8NCU8 138 aa6.06□□□□□ -1.44
VPS50-209ENST00000467326 HAUS7Q99871 368 aa6.06□□□□□ -1.44
VPS50-209ENST00000467326 BUD13Q9BRD0 619 aaKnown RBP eCLIP6.06□□□□□ -1.44
VPS50-209ENST00000467326 FITM1A5D6W6 292 aa6.05□□□□□ -1.44
VPS50-209ENST00000467326 CBFA2T2O43439 604 aa6.05□□□□□ -1.44
VPS50-209ENST00000467326 ITGA4P13612 1032 aa6.05□□□□□ -1.44
VPS50-209ENST00000467326 BMP8BP34820 402 aa6.05□□□□□ -1.44
VPS50-209ENST00000467326 CTSKP43235 329 aa6.05□□□□□ -1.44
VPS50-209ENST00000467326 ERVFC1P60507 584 aa6.05□□□□□ -1.44
VPS50-209ENST00000467326 CHRNEQ04844 493 aa6.05□□□□□ -1.44
VPS50-209ENST00000467326 GNPTABQ3T906 1256 aa6.05□□□□□ -1.44
VPS50-209ENST00000467326 NOL9Q5SY16 702 aaKnown RBP6.05□□□□□ -1.44
VPS50-209ENST00000467326 OXR1Q8N573 874 aa6.05□□□□□ -1.44
VPS50-209ENST00000467326 USHBP1Q8N6Y0 703 aa6.05□□□□□ -1.44
VPS50-209ENST00000467326 MYLIPQ8WY64 445 aa6.05□□□□□ -1.44
VPS50-209ENST00000467326 GP6Q9HCN6 339 aa6.05□□□□□ -1.44
VPS50-209ENST00000467326 PCDHB10Q9UN67 800 aa6.05□□□□□ -1.44
VPS50-209ENST00000467326 FHOD1Q9Y613 1164 aa6.05□□□□□ -1.44
VPS50-209ENST00000467326 TMEM82A0PJX8 343 aa6.04□□□□□ -1.44
VPS50-209ENST00000467326 ZNF205O95201 554 aa6.04□□□□□ -1.44
VPS50-209ENST00000467326 GLI1P08151 1106 aa6.04□□□□□ -1.44
VPS50-209ENST00000467326 FGRP09769 529 aa6.04□□□□□ -1.44
VPS50-209ENST00000467326 ENDOUP21128 410 aaKnown RBP6.04□□□□□ -1.44
VPS50-209ENST00000467326 CASP7P55210 303 aa6.04□□□□□ -1.44
VPS50-209ENST00000467326 ZNF445P59923 1031 aa6.04□□□□□ -1.44
VPS50-209ENST00000467326 SLC7A5Q01650 507 aa6.04□□□□□ -1.44
VPS50-209ENST00000467326 ANKRD39Q53RE8 183 aa6.04□□□□□ -1.44
VPS50-209ENST00000467326 ANKS4BQ8N8V4 417 aa6.04□□□□□ -1.44
VPS50-209ENST00000467326 ABHD4Q8TB40 342 aa6.04□□□□□ -1.44
VPS50-209ENST00000467326 KLHL6Q8WZ60 621 aa6.04□□□□□ -1.44
VPS50-209ENST00000467326 PPP1R16BQ96T49 567 aa6.04□□□□□ -1.44
VPS50-209ENST00000467326 G6PC3Q9BUM1 346 aa6.04□□□□□ -1.44
VPS50-209ENST00000467326 GBP3Q9H0R5 595 aa6.04□□□□□ -1.44
VPS50-209ENST00000467326 ZMYM5Q9UJ78 669 aa6.04□□□□□ -1.44
VPS50-209ENST00000467326 MRVI1Q9Y6F6 885 aa6.04□□□□□ -1.44
VPS50-209ENST00000467326 H0Y8X5 98 aa6.03□□□□□ -1.44
VPS50-209ENST00000467326 USP2O75604 605 aaPredicted RBP6.03□□□□□ -1.44
VPS50-209ENST00000467326 GSNP06396 782 aa6.03□□□□□ -1.44
VPS50-209ENST00000467326 CD247P20963 164 aa6.03□□□□□ -1.44
VPS50-209ENST00000467326 DNAJA1P31689 397 aaKnown RBP6.03□□□□□ -1.44
VPS50-209ENST00000467326 TRHRP34981 398 aaPredicted RBP6.03□□□□□ -1.44
VPS50-209ENST00000467326 ARID5AQ03989 594 aa6.03□□□□□ -1.44
VPS50-209ENST00000467326 TCEAL1Q15170 157 aa6.03□□□□□ -1.44
VPS50-209ENST00000467326 TNNI3KQ59H18 835 aa6.03□□□□□ -1.44
VPS50-209ENST00000467326 TMEM67Q5HYA8 995 aa6.03□□□□□ -1.44
VPS50-209ENST00000467326 CWF19L1Q69YN2 538 aaKnown RBP6.03□□□□□ -1.44
VPS50-209ENST00000467326 HEATR6Q6AI08 1181 aaKnown RBP6.03□□□□□ -1.44
VPS50-209ENST00000467326 KRTAP5-3Q6L8H2 238 aa6.03□□□□□ -1.44
VPS50-209ENST00000467326 VHLLQ6RSH7 139 aa6.03□□□□□ -1.44
VPS50-209ENST00000467326 MPZL3Q6UWV2 235 aa6.03□□□□□ -1.44
VPS50-209ENST00000467326 LILRA2Q8N149 483 aa6.03□□□□□ -1.44
VPS50-209ENST00000467326 FIBCD1Q8N539 461 aa6.03□□□□□ -1.44
VPS50-209ENST00000467326 LINC01599Q8WXQ3 324 aa6.03□□□□□ -1.44
VPS50-209ENST00000467326 BRF1Q92994 677 aa6.03□□□□□ -1.44
VPS50-209ENST00000467326 MAP6Q96JE9 813 aa6.03□□□□□ -1.44
VPS50-209ENST00000467326 FCRL2Q96LA5 508 aaPredicted RBP6.03□□□□□ -1.44
VPS50-209ENST00000467326 CDADC1Q9BWV3 514 aa6.03□□□□□ -1.44
VPS50-209ENST00000467326 WHRNQ9P202 907 aa6.03□□□□□ -1.44
VPS50-209ENST00000467326 EBF1Q9UH73 591 aa6.03□□□□□ -1.44
VPS50-209ENST00000467326 ZNF281Q9Y2X9 895 aa6.03□□□□□ -1.44
VPS50-209ENST00000467326 ZNF451Q9Y4E5 1061 aa6.03□□□□□ -1.44
VPS50-209ENST00000467326 ZNF503-AS2A6NEH8 195 aa6.02□□□□□ -1.45
VPS50-209ENST00000467326 IQCJ-SCHIP1C9J366 451 aaPredicted RBP6.02□□□□□ -1.45
VPS50-209ENST00000467326 SMAD7O15105 426 aaKnown RBP6.02□□□□□ -1.45
VPS50-209ENST00000467326 EPHX1P07099 455 aa6.02□□□□□ -1.45
VPS50-209ENST00000467326 RAP1GAPP47736 663 aa6.02□□□□□ -1.45
VPS50-209ENST00000467326 NR0B2Q15466 257 aa6.02□□□□□ -1.45
VPS50-209ENST00000467326 TIGD5Q53EQ6 642 aa6.02□□□□□ -1.45
VPS50-209ENST00000467326 LILRA6Q6PI73 481 aa6.02□□□□□ -1.45
VPS50-209ENST00000467326 ZPBP2Q6X784 338 aa6.02□□□□□ -1.45
VPS50-209ENST00000467326 MCF2L2Q86YR7 1114 aa6.02□□□□□ -1.45
VPS50-209ENST00000467326 SIAH1Q8IUQ4 282 aa6.02□□□□□ -1.45
VPS50-209ENST00000467326 LIN37Q96GY3 246 aaPredicted RBP6.02□□□□□ -1.45
VPS50-209ENST00000467326 RNF32Q9H0A6 362 aa6.02□□□□□ -1.45
VPS50-209ENST00000467326 KLHL25Q9H0H3 589 aa6.02□□□□□ -1.45
VPS50-209ENST00000467326 NOL6Q9H6R4 1146 aaKnown RBP6.02□□□□□ -1.45
VPS50-209ENST00000467326 C19orf44Q9H6X5 657 aa6.02□□□□□ -1.45
VPS50-209ENST00000467326 ACTR10Q9NZ32 417 aa6.02□□□□□ -1.45
VPS50-209ENST00000467326 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP6.02□□□□□ -1.45
VPS50-209ENST00000467326 SF3B6Q9Y3B4 125 aaKnown RBP6.02□□□□□ -1.45
VPS50-209ENST00000467326 LRRC10BA6NIK2 292 aa6.01□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms