RNA–Protein interactions for RNA: ENST00000466579.1

SDCCAG3-208, Transcript of Serologically defined colon cancer antigen 3, humanhuman

TSL 1 (best)

Gene SDCCAG3, Length 496 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCCAG3-208ENST00000466579 ZNFX1Q9P2E3 1918 aaKnown RBP11.13□□□□□ -0.63
SDCCAG3-208ENST00000466579 SLC15A5A6NIM6 579 aa11.13□□□□□ -0.63
SDCCAG3-208ENST00000466579 TMEM232C9JQI7 657 aa11.13□□□□□ -0.63
SDCCAG3-208ENST00000466579 STRNO43815 780 aa11.13□□□□□ -0.63
SDCCAG3-208ENST00000466579 RAD21O60216 631 aa11.13□□□□□ -0.63
SDCCAG3-208ENST00000466579 IGHA2P01877 340 aa11.13□□□□□ -0.63
SDCCAG3-208ENST00000466579 HOXC6P09630 235 aa11.13□□□□□ -0.63
SDCCAG3-208ENST00000466579 PTPREP23469 700 aa11.13□□□□□ -0.63
SDCCAG3-208ENST00000466579 COPB2P35606 906 aa11.13□□□□□ -0.63
SDCCAG3-208ENST00000466579 STAT2P52630 851 aa11.13□□□□□ -0.63
SDCCAG3-208ENST00000466579 ANTXR2P58335 489 aa11.13□□□□□ -0.63
SDCCAG3-208ENST00000466579 GRB14Q14449 540 aa11.13□□□□□ -0.63
SDCCAG3-208ENST00000466579 ABRAQ8N0Z2 381 aa11.13□□□□□ -0.63
SDCCAG3-208ENST00000466579 SLAIN1Q8ND83 568 aa11.13□□□□□ -0.63
SDCCAG3-208ENST00000466579 RAET1EQ8TD07 263 aa11.13□□□□□ -0.63
SDCCAG3-208ENST00000466579 ZNF333Q96JL9 665 aa11.13□□□□□ -0.63
SDCCAG3-208ENST00000466579 ZKSCAN3Q9BRR0 538 aa11.13□□□□□ -0.63
SDCCAG3-208ENST00000466579 ERCC3P19447 782 aa11.12□□□□□ -0.63
SDCCAG3-208ENST00000466579 GRK4P32298 578 aa11.12□□□□□ -0.63
SDCCAG3-208ENST00000466579 STAT3P40763 770 aa11.12□□□□□ -0.63
SDCCAG3-208ENST00000466579 ZNF543Q08ER8 600 aa11.12□□□□□ -0.63
SDCCAG3-208ENST00000466579 SLC9C1Q4G0N8 1177 aa11.12□□□□□ -0.63
SDCCAG3-208ENST00000466579 RNF20Q5VTR2 975 aa11.12□□□□□ -0.63
SDCCAG3-208ENST00000466579 KCTD1Q719H9 257 aa11.12□□□□□ -0.63
SDCCAG3-208ENST00000466579 RASGRP2Q7LDG7 609 aa11.12□□□□□ -0.63
SDCCAG3-208ENST00000466579 RALYLQ86SE5 291 aaKnown RBP11.12□□□□□ -0.63
SDCCAG3-208ENST00000466579 NBPF11Q86T75 865 aa11.12□□□□□ -0.63
SDCCAG3-208ENST00000466579 PNMA1Q8ND90 353 aa11.12□□□□□ -0.63
SDCCAG3-208ENST00000466579 IGDCC4Q8TDY8 1250 aa11.12□□□□□ -0.63
SDCCAG3-208ENST00000466579 NUDT12Q9BQG2 462 aa11.12□□□□□ -0.63
SDCCAG3-208ENST00000466579 UBAC1Q9BSL1 405 aa11.12□□□□□ -0.63
SDCCAG3-208ENST00000466579 TEX13BQ9BXU2 312 aa11.12□□□□□ -0.63
SDCCAG3-208ENST00000466579 BRCA2P51587 3418 aa11.12□□□□□ -0.63
SDCCAG3-208ENST00000466579 ZNF536O15090 1300 aa11.11□□□□□ -0.63
SDCCAG3-208ENST00000466579 WDR19Q8NEZ3 1342 aa11.11□□□□□ -0.63
SDCCAG3-208ENST00000466579 ADCY3O60266 1144 aa11.11□□□□□ -0.63
SDCCAG3-208ENST00000466579 ZBED4O75132 1171 aa11.11□□□□□ -0.63
SDCCAG3-208ENST00000466579 ECM2O94769 699 aaPredicted RBP11.11□□□□□ -0.63
SDCCAG3-208ENST00000466579 REC8O95072 547 aa11.11□□□□□ -0.63
SDCCAG3-208ENST00000466579 HSPA4P34932 840 aa11.11□□□□□ -0.63
SDCCAG3-208ENST00000466579 RGS2P41220 211 aa11.11□□□□□ -0.63
SDCCAG3-208ENST00000466579 MAP2K5Q13163 448 aa11.11□□□□□ -0.63
SDCCAG3-208ENST00000466579 GPATCH4Q5T3I0 446 aaKnown RBP11.11□□□□□ -0.63
SDCCAG3-208ENST00000466579 IFIT1BQ5T764 474 aaKnown RBP11.11□□□□□ -0.63
SDCCAG3-208ENST00000466579 TRMT44Q8IYL2 757 aaKnown RBP11.11□□□□□ -0.63
SDCCAG3-208ENST00000466579 RASEFQ8IZ41 740 aa11.11□□□□□ -0.63
SDCCAG3-208ENST00000466579 KIFC2Q96AC6 838 aa11.11□□□□□ -0.63
SDCCAG3-208ENST00000466579 APBA2Q99767 749 aa11.11□□□□□ -0.63
SDCCAG3-208ENST00000466579 RANBP17Q9H2T7 1088 aaKnown RBP11.11□□□□□ -0.63
SDCCAG3-208ENST00000466579 KAT14Q9H8E8 782 aa11.11□□□□□ -0.63
SDCCAG3-208ENST00000466579 PRR12Q9ULL5 1215 aa11.11□□□□□ -0.63
SDCCAG3-208ENST00000466579 CCDC85CA6NKD9 419 aa11.1□□□□□ -0.63
SDCCAG3-208ENST00000466579 MCM5P33992 734 aa11.1□□□□□ -0.63
SDCCAG3-208ENST00000466579 RGS19P49795 217 aa11.1□□□□□ -0.63
SDCCAG3-208ENST00000466579 COL9A3Q14050 684 aaPredicted RBP11.1□□□□□ -0.63
SDCCAG3-208ENST00000466579 ASPRV1Q53RT3 343 aa11.1□□□□□ -0.63
SDCCAG3-208ENST00000466579 MAP3K21Q5TCX8 1036 aa11.1□□□□□ -0.63
SDCCAG3-208ENST00000466579 SYDE2Q5VT97 1194 aa11.1□□□□□ -0.63
SDCCAG3-208ENST00000466579 TTBK2Q6IQ55 1244 aa11.1□□□□□ -0.63
SDCCAG3-208ENST00000466579 CCAR1Q8IX12 1150 aaKnown RBP11.1□□□□□ -0.63
SDCCAG3-208ENST00000466579 SH3TC2Q8TF17 1288 aa11.1□□□□□ -0.63
SDCCAG3-208ENST00000466579 TMEM87BQ96K49 555 aa11.1□□□□□ -0.63
SDCCAG3-208ENST00000466579 MAP3K14Q99558 947 aa11.1□□□□□ -0.63
SDCCAG3-208ENST00000466579 RIPK3Q9Y572 518 aa11.1□□□□□ -0.63
SDCCAG3-208ENST00000466579 SMCHD1A6NHR9 2005 aa11.09□□□□□ -0.63
SDCCAG3-208ENST00000466579 KIAA0100Q14667 2235 aaKnown RBP11.09□□□□□ -0.63
SDCCAG3-208ENST00000466579 PLXNA1Q9UIW2 1896 aa11.09□□□□□ -0.63
SDCCAG3-208ENST00000466579 PALM3A6NDB9 673 aaPredicted RBP11.09□□□□□ -0.63
SDCCAG3-208ENST00000466579 IFIT3O14879 490 aaKnown RBP11.09□□□□□ -0.63
SDCCAG3-208ENST00000466579 PRC1O43663 620 aa11.09□□□□□ -0.63
SDCCAG3-208ENST00000466579 HMGCRP04035 888 aa11.09□□□□□ -0.63
SDCCAG3-208ENST00000466579 ELNP15502 786 aa11.09□□□□□ -0.63
SDCCAG3-208ENST00000466579 LIFRP42702 1097 aa11.09□□□□□ -0.63
SDCCAG3-208ENST00000466579 EXOSC10Q01780 885 aaKnown RBP11.09□□□□□ -0.63
SDCCAG3-208ENST00000466579 TROAPQ12815 778 aa11.09□□□□□ -0.63
SDCCAG3-208ENST00000466579 KRT32Q14532 448 aa11.09□□□□□ -0.63
SDCCAG3-208ENST00000466579 PLS1Q14651 629 aa11.09□□□□□ -0.63
SDCCAG3-208ENST00000466579 WTAPQ15007 396 aa11.09□□□□□ -0.63
SDCCAG3-208ENST00000466579 SART3Q15020 963 aaKnown RBP11.09□□□□□ -0.63
SDCCAG3-208ENST00000466579 CCDC96Q2M329 555 aa11.09□□□□□ -0.63
SDCCAG3-208ENST00000466579 TKFCQ3LXA3 575 aa11.09□□□□□ -0.63
SDCCAG3-208ENST00000466579 SNRNP48Q6IEG0 339 aaKnown RBP11.09□□□□□ -0.63
SDCCAG3-208ENST00000466579 SAMD1Q6SPF0 538 aaPredicted RBP11.09□□□□□ -0.63
SDCCAG3-208ENST00000466579 NCAPG2Q86XI2 1143 aa11.09□□□□□ -0.63
SDCCAG3-208ENST00000466579 CHST13Q8NET6 341 aa11.09□□□□□ -0.63
SDCCAG3-208ENST00000466579 TRIB2Q92519 343 aa11.09□□□□□ -0.63
SDCCAG3-208ENST00000466579 LY9Q9HBG7 655 aa11.09□□□□□ -0.63
SDCCAG3-208ENST00000466579 SENP2Q9HC62 589 aa11.09□□□□□ -0.63
SDCCAG3-208ENST00000466579 PNMA2Q9UL42 364 aa11.09□□□□□ -0.63
SDCCAG3-208ENST00000466579 DIS3Q9Y2L1 958 aaKnown RBP11.09□□□□□ -0.63
SDCCAG3-208ENST00000466579 IVNS1ABPQ9Y6Y0 642 aa11.09□□□□□ -0.63
SDCCAG3-208ENST00000466579 FRMPD2Q68DX3 1309 aaPredicted RBP11.09□□□□□ -0.63
SDCCAG3-208ENST00000466579 DNAJC25-GNG10A0A024R161 153 aa11.08□□□□□ -0.64
SDCCAG3-208ENST00000466579 ERICH2A1L162 156 aa11.08□□□□□ -0.64
SDCCAG3-208ENST00000466579 SH2B2O14492 632 aaPredicted RBP11.08□□□□□ -0.64
SDCCAG3-208ENST00000466579 COBLO75128 1261 aa11.08□□□□□ -0.64
SDCCAG3-208ENST00000466579 INHAP05111 366 aa11.08□□□□□ -0.64
SDCCAG3-208ENST00000466579 ICAM1P05362 532 aa11.08□□□□□ -0.64
SDCCAG3-208ENST00000466579 FCER1AP12319 257 aa11.08□□□□□ -0.64
SDCCAG3-208ENST00000466579 ZKSCAN1P17029 563 aaPredicted RBP11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms