RNA–Protein interactions for RNA: ENST00000466541.1

SHROOM3-202, Transcript of shroom family member 3, humanhuman

TSL 3

Gene SHROOM3, Length 628 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3-202ENST00000466541 RASEFQ8IZ41 740 aa14.11□□□□□ -0.15
SHROOM3-202ENST00000466541 SENP2Q9HC62 589 aa14.11□□□□□ -0.15
SHROOM3-202ENST00000466541 RAVER2Q9HCJ3 691 aaKnown RBP14.11□□□□□ -0.15
SHROOM3-202ENST00000466541 IVNS1ABPQ9Y6Y0 642 aa14.11□□□□□ -0.15
SHROOM3-202ENST00000466541 PRC1O43663 620 aa14.1□□□□□ -0.15
SHROOM3-202ENST00000466541 PDHBP11177 359 aa14.1□□□□□ -0.15
SHROOM3-202ENST00000466541 ELNP15502 786 aa14.1□□□□□ -0.15
SHROOM3-202ENST00000466541 ZKSCAN1P17029 563 aaPredicted RBP14.1□□□□□ -0.15
SHROOM3-202ENST00000466541 ERCC3P19447 782 aa14.1□□□□□ -0.15
SHROOM3-202ENST00000466541 MCM5P33992 734 aa14.1□□□□□ -0.15
SHROOM3-202ENST00000466541 STAT3P40763 770 aa14.1□□□□□ -0.15
SHROOM3-202ENST00000466541 ANTXR2P58335 489 aa14.1□□□□□ -0.15
SHROOM3-202ENST00000466541 COL9A3Q14050 684 aaPredicted RBP14.1□□□□□ -0.15
SHROOM3-202ENST00000466541 SNRNP48Q6IEG0 339 aaKnown RBP14.1□□□□□ -0.15
SHROOM3-202ENST00000466541 NFXL1Q6ZNB6 911 aa14.1□□□□□ -0.15
SHROOM3-202ENST00000466541 FAM160B2Q86V87 743 aa14.1□□□□□ -0.15
SHROOM3-202ENST00000466541 CPVLQ9H3G5 476 aa14.1□□□□□ -0.15
SHROOM3-202ENST00000466541 GPHNQ9NQX3 736 aaPredicted RBP14.1□□□□□ -0.15
SHROOM3-202ENST00000466541 ADAMTS5Q9UNA0 930 aa14.1□□□□□ -0.15
SHROOM3-202ENST00000466541 GTF3C3Q9Y5Q9 886 aa14.1□□□□□ -0.15
SHROOM3-202ENST00000466541 PLXNB2O15031 1838 aa14.1□□□□□ -0.15
SHROOM3-202ENST00000466541 HTTP42858 3142 aa14.1□□□□□ -0.15
SHROOM3-202ENST00000466541 A0A0G2JMZ2 1700 aa14.1□□□□□ -0.15
SHROOM3-202ENST00000466541 CENPFP49454 3210 aa14.09□□□□□ -0.15
SHROOM3-202ENST00000466541 ADCY3O60266 1144 aa14.09□□□□□ -0.15
SHROOM3-202ENST00000466541 NT5C2P49902 561 aa14.09□□□□□ -0.15
SHROOM3-202ENST00000466541 PRMT2P55345 433 aa14.09□□□□□ -0.15
SHROOM3-202ENST00000466541 ZNF543Q08ER8 600 aa14.09□□□□□ -0.15
SHROOM3-202ENST00000466541 SEC23AQ15436 765 aa14.09□□□□□ -0.15
SHROOM3-202ENST00000466541 ADCK5Q3MIX3 580 aa14.09□□□□□ -0.15
SHROOM3-202ENST00000466541 TCEANC2Q96MN5 208 aa14.09□□□□□ -0.15
SHROOM3-202ENST00000466541 NUDT12Q9BQG2 462 aa14.09□□□□□ -0.15
SHROOM3-202ENST00000466541 UBA5Q9GZZ9 404 aa14.09□□□□□ -0.15
SHROOM3-202ENST00000466541 HOMER2Q9NSB8 354 aa14.09□□□□□ -0.15
SHROOM3-202ENST00000466541 PRR12Q9ULL5 1215 aa14.09□□□□□ -0.15
SHROOM3-202ENST00000466541 ZNFX1Q9P2E3 1918 aaKnown RBP14.09□□□□□ -0.15
SHROOM3-202ENST00000466541 DHX16O60231 1041 aaKnown RBP14.08□□□□□ -0.16
SHROOM3-202ENST00000466541 PARP1P09874 1014 aaKnown RBP14.08□□□□□ -0.16
SHROOM3-202ENST00000466541 CPA1P15085 419 aa14.08□□□□□ -0.16
SHROOM3-202ENST00000466541 GRK4P32298 578 aa14.08□□□□□ -0.16
SHROOM3-202ENST00000466541 SYDE2Q5VT97 1194 aa14.08□□□□□ -0.16
SHROOM3-202ENST00000466541 NBPF11Q86T75 865 aa14.08□□□□□ -0.16
SHROOM3-202ENST00000466541 RAB11FIP4Q86YS3 637 aa14.08□□□□□ -0.16
SHROOM3-202ENST00000466541 REPS2Q8NFH8 660 aa14.08□□□□□ -0.16
SHROOM3-202ENST00000466541 NUP133Q8WUM0 1156 aa14.08□□□□□ -0.16
SHROOM3-202ENST00000466541 ANKS1AQ92625 1134 aa14.08□□□□□ -0.16
SHROOM3-202ENST00000466541 AGBL1Q96MI9 1066 aa14.08□□□□□ -0.16
SHROOM3-202ENST00000466541 NEK1Q96PY6 1258 aa14.08□□□□□ -0.16
SHROOM3-202ENST00000466541 SLC38A10Q9HBR0 1119 aa14.08□□□□□ -0.16
SHROOM3-202ENST00000466541 VAT1LQ9HCJ6 419 aa14.08□□□□□ -0.16
SHROOM3-202ENST00000466541 GJD2Q9UKL4 321 aa14.08□□□□□ -0.16
SHROOM3-202ENST00000466541 SLC25A27O95847 323 aa14.07□□□□□ -0.16
SHROOM3-202ENST00000466541 TAL1P17542 331 aaPredicted RBP14.07□□□□□ -0.16
SHROOM3-202ENST00000466541 HSPA4P34932 840 aa14.07□□□□□ -0.16
SHROOM3-202ENST00000466541 SOX10P56693 466 aa14.07□□□□□ -0.16
SHROOM3-202ENST00000466541 FGD1P98174 961 aa14.07□□□□□ -0.16
SHROOM3-202ENST00000466541 CATIPQ7Z7H3 387 aa14.07□□□□□ -0.16
SHROOM3-202ENST00000466541 DPP9Q86TI2 863 aa14.07□□□□□ -0.16
SHROOM3-202ENST00000466541 IGDCC4Q8TDY8 1250 aa14.07□□□□□ -0.16
SHROOM3-202ENST00000466541 JAKMIP1Q96N16 626 aaKnown RBP14.07□□□□□ -0.16
SHROOM3-202ENST00000466541 MMP19Q99542 508 aa14.07□□□□□ -0.16
SHROOM3-202ENST00000466541 MYL10Q9BUA6 226 aa14.07□□□□□ -0.16
SHROOM3-202ENST00000466541 TEX13BQ9BXU2 312 aa14.07□□□□□ -0.16
SHROOM3-202ENST00000466541 MROH8Q9H579 483 aa14.07□□□□□ -0.16
SHROOM3-202ENST00000466541 ZNF214Q9UL59 606 aaPredicted RBP14.07□□□□□ -0.16
SHROOM3-202ENST00000466541 RIPK3Q9Y572 518 aa14.07□□□□□ -0.16
SHROOM3-202ENST00000466541 SNX14Q9Y5W7 946 aa14.07□□□□□ -0.16
SHROOM3-202ENST00000466541 SMCHD1A6NHR9 2005 aa14.07□□□□□ -0.16
SHROOM3-202ENST00000466541 MYH6P13533 1939 aa14.06□□□□□ -0.16
SHROOM3-202ENST00000466541 CCDC69A6NI79 296 aa14.06□□□□□ -0.16
SHROOM3-202ENST00000466541 SLC15A5A6NIM6 579 aa14.06□□□□□ -0.16
SHROOM3-202ENST00000466541 ALAS1P13196 640 aa14.06□□□□□ -0.16
SHROOM3-202ENST00000466541 PTPREP23469 700 aa14.06□□□□□ -0.16
SHROOM3-202ENST00000466541 RGS2P41220 211 aa14.06□□□□□ -0.16
SHROOM3-202ENST00000466541 KRT32Q14532 448 aa14.06□□□□□ -0.16
SHROOM3-202ENST00000466541 MORN1Q5T089 497 aa14.06□□□□□ -0.16
SHROOM3-202ENST00000466541 RIOX2Q8IUF8 465 aa14.06□□□□□ -0.16
SHROOM3-202ENST00000466541 SOCS4Q8WXH5 440 aa14.06□□□□□ -0.16
SHROOM3-202ENST00000466541 USP26Q9BXU7 913 aa14.06□□□□□ -0.16
SHROOM3-202ENST00000466541 LY9Q9HBG7 655 aa14.06□□□□□ -0.16
SHROOM3-202ENST00000466541 NAP1L2Q9ULW6 460 aaPredicted RBP14.06□□□□□ -0.16
SHROOM3-202ENST00000466541 BAZ2BQ9UIF8 2168 aaKnown RBP14.05□□□□□ -0.16
SHROOM3-202ENST00000466541 PLA2G6O60733 806 aa14.05□□□□□ -0.16
SHROOM3-202ENST00000466541 PGK2P07205 417 aa14.05□□□□□ -0.16
SHROOM3-202ENST00000466541 SNHG28P0DPA3 235 aa14.05□□□□□ -0.16
SHROOM3-202ENST00000466541 FCER1AP12319 257 aa14.05□□□□□ -0.16
SHROOM3-202ENST00000466541 RXRAP19793 462 aa14.05□□□□□ -0.16
SHROOM3-202ENST00000466541 ADORA2AP29274 412 aa14.05□□□□□ -0.16
SHROOM3-202ENST00000466541 MAP2K5Q13163 448 aa14.05□□□□□ -0.16
SHROOM3-202ENST00000466541 CCL14Q16627 93 aa14.05□□□□□ -0.16
SHROOM3-202ENST00000466541 ASPRV1Q53RT3 343 aa14.05□□□□□ -0.16
SHROOM3-202ENST00000466541 GPATCH4Q5T3I0 446 aaKnown RBP14.05□□□□□ -0.16
SHROOM3-202ENST00000466541 CCDC144CPQ8IYA2 1237 aa14.05□□□□□ -0.16
SHROOM3-202ENST00000466541 STAG2Q8N3U4 1231 aa14.05□□□□□ -0.16
SHROOM3-202ENST00000466541 SLAIN1Q8ND83 568 aa14.05□□□□□ -0.16
SHROOM3-202ENST00000466541 SHCBP1Q8NEM2 672 aa14.05□□□□□ -0.16
SHROOM3-202ENST00000466541 PIBF1Q8WXW3 757 aa14.05□□□□□ -0.16
SHROOM3-202ENST00000466541 CCPG1Q9ULG6 757 aa14.05□□□□□ -0.16
SHROOM3-202ENST00000466541 SH2B2O14492 632 aaPredicted RBP14.04□□□□□ -0.16
SHROOM3-202ENST00000466541 STRNO43815 780 aa14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms