RNA–Protein interactions for RNA: ENST00000466538.1

CDC42BPA-211, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 3

Gene CDC42BPA, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-211ENST00000466538 ATG3Q9NT62 314 aa6.31□□□□□ -1.4
CDC42BPA-211ENST00000466538 GFOD1Q9NXC2 390 aa6.31□□□□□ -1.4
CDC42BPA-211ENST00000466538 CGGBP1Q9UFW8 167 aaPredicted RBP6.31□□□□□ -1.4
CDC42BPA-211ENST00000466538 PLAAQ9Y263 795 aa6.31□□□□□ -1.4
CDC42BPA-211ENST00000466538 CAPN6Q9Y6Q1 641 aa6.31□□□□□ -1.4
CDC42BPA-211ENST00000466538 TRBV23-1A0A0A0MS06 115 aa6.3□□□□□ -1.4
CDC42BPA-211ENST00000466538 FAM170BA6NMN3 283 aa6.3□□□□□ -1.4
CDC42BPA-211ENST00000466538 ASMTLO95671 621 aa6.3□□□□□ -1.4
CDC42BPA-211ENST00000466538 F13BP05160 661 aa6.3□□□□□ -1.4
CDC42BPA-211ENST00000466538 GSNP06396 782 aa6.3□□□□□ -1.4
CDC42BPA-211ENST00000466538 PABPC1P11940 636 aaKnown RBP6.3□□□□□ -1.4
CDC42BPA-211ENST00000466538 HSP90B1P14625 803 aaKnown RBP6.3□□□□□ -1.4
CDC42BPA-211ENST00000466538 NOP2P46087 812 aaKnown RBP6.3□□□□□ -1.4
CDC42BPA-211ENST00000466538 GSK3AP49840 483 aa6.3□□□□□ -1.4
CDC42BPA-211ENST00000466538 POU4F1Q01851 419 aa6.3□□□□□ -1.4
CDC42BPA-211ENST00000466538 TNK2Q07912 1038 aa6.3□□□□□ -1.4
CDC42BPA-211ENST00000466538 SNW1Q13573 536 aaKnown RBP6.3□□□□□ -1.4
CDC42BPA-211ENST00000466538 ZNF765Q7L2R6 523 aa6.3□□□□□ -1.4
CDC42BPA-211ENST00000466538 DSCC1Q9BVC3 393 aa6.3□□□□□ -1.4
CDC42BPA-211ENST00000466538 BRINP2Q9C0B6 783 aa6.3□□□□□ -1.4
CDC42BPA-211ENST00000466538 TRIT1Q9H3H1 467 aaKnown RBP6.3□□□□□ -1.4
CDC42BPA-211ENST00000466538 NOL6Q9H6R4 1146 aaKnown RBP6.3□□□□□ -1.4
CDC42BPA-211ENST00000466538 CYP26B1Q9NR63 512 aa6.3□□□□□ -1.4
CDC42BPA-211ENST00000466538 TPSG1Q9NRR2 321 aa6.3□□□□□ -1.4
CDC42BPA-211ENST00000466538 GPATCH2Q9NW75 528 aa6.3□□□□□ -1.4
CDC42BPA-211ENST00000466538 FAM155AB1AL88 458 aaPredicted RBP6.29□□□□□ -1.4
CDC42BPA-211ENST00000466538 PLD2O14939 933 aa6.29□□□□□ -1.4
CDC42BPA-211ENST00000466538 KCNH1O95259 989 aa6.29□□□□□ -1.4
CDC42BPA-211ENST00000466538 PRAMEF1O95521 474 aa6.29□□□□□ -1.4
CDC42BPA-211ENST00000466538 CPP00450 1065 aa6.29□□□□□ -1.4
CDC42BPA-211ENST00000466538 IGLV1-40P01703 118 aa6.29□□□□□ -1.4
CDC42BPA-211ENST00000466538 ITIH2P19823 946 aa6.29□□□□□ -1.4
CDC42BPA-211ENST00000466538 OXCT1P55809 520 aa6.29□□□□□ -1.4
CDC42BPA-211ENST00000466538 SUMO1P63165 101 aaKnown RBP6.29□□□□□ -1.4
CDC42BPA-211ENST00000466538 AMPD2Q01433 879 aa6.29□□□□□ -1.4
CDC42BPA-211ENST00000466538 CLEC16AQ2KHT3 1053 aa6.29□□□□□ -1.4
CDC42BPA-211ENST00000466538 PLA2G4EQ3MJ16 856 aa6.29□□□□□ -1.4
CDC42BPA-211ENST00000466538 FNDC3BQ53EP0 1204 aaKnown RBP6.29□□□□□ -1.4
CDC42BPA-211ENST00000466538 FOXB2Q5VYV0 432 aa6.29□□□□□ -1.4
CDC42BPA-211ENST00000466538 CWF19L1Q69YN2 538 aaKnown RBP6.29□□□□□ -1.4
CDC42BPA-211ENST00000466538 GTF2IRD2BQ6EKJ0 949 aa6.29□□□□□ -1.4
CDC42BPA-211ENST00000466538 TMC3Q7Z5M5 1100 aa6.29□□□□□ -1.4
CDC42BPA-211ENST00000466538 GTF2IRD2Q86UP8 949 aa6.29□□□□□ -1.4
CDC42BPA-211ENST00000466538 ADCY4Q8NFM4 1077 aa6.29□□□□□ -1.4
CDC42BPA-211ENST00000466538 ZCRB1Q8TBF4 217 aaKnown RBP6.29□□□□□ -1.4
CDC42BPA-211ENST00000466538 EXOC2Q96KP1 924 aa6.29□□□□□ -1.4
CDC42BPA-211ENST00000466538 OSBPL1AQ9BXW6 950 aa6.29□□□□□ -1.4
CDC42BPA-211ENST00000466538 SPC25Q9HBM1 224 aa6.29□□□□□ -1.4
CDC42BPA-211ENST00000466538 MRPS23Q9Y3D9 190 aaKnown RBP6.29□□□□□ -1.4
CDC42BPA-211ENST00000466538 PRR33A8MZF0 331 aa6.28□□□□□ -1.4
CDC42BPA-211ENST00000466538 WDR64B1ANS9 1081 aa6.28□□□□□ -1.4
CDC42BPA-211ENST00000466538 PRODHO43272 600 aa6.28□□□□□ -1.4
CDC42BPA-211ENST00000466538 GDF11O95390 407 aa6.28□□□□□ -1.4
CDC42BPA-211ENST00000466538 SCG5P05408 212 aa6.28□□□□□ -1.4
CDC42BPA-211ENST00000466538 L1CAMP32004 1257 aa6.28□□□□□ -1.4
CDC42BPA-211ENST00000466538 MAP4K2Q12851 820 aa6.28□□□□□ -1.4
CDC42BPA-211ENST00000466538 PPP2R5DQ14738 602 aa6.28□□□□□ -1.4
CDC42BPA-211ENST00000466538 DALRD3Q5D0E6 543 aaKnown RBP6.28□□□□□ -1.4
CDC42BPA-211ENST00000466538 FAM209AQ5JX71 171 aa6.28□□□□□ -1.4
CDC42BPA-211ENST00000466538 ARHGAP27Q6ZUM4 889 aa6.28□□□□□ -1.4
CDC42BPA-211ENST00000466538 THAP5Q7Z6K1 395 aa6.28□□□□□ -1.4
CDC42BPA-211ENST00000466538 ANKRD13AQ8IZ07 590 aa6.28□□□□□ -1.4
CDC42BPA-211ENST00000466538 TMEM151AQ8N4L1 468 aa6.28□□□□□ -1.4
CDC42BPA-211ENST00000466538 BTN2A2Q8WVV5 523 aa6.28□□□□□ -1.4
CDC42BPA-211ENST00000466538 KCTD13Q8WZ19 329 aa6.28□□□□□ -1.4
CDC42BPA-211ENST00000466538 OSBP2Q969R2 916 aa6.28□□□□□ -1.4
CDC42BPA-211ENST00000466538 HDAC8Q9BY41 377 aa6.28□□□□□ -1.4
CDC42BPA-211ENST00000466538 MRPL4Q9BYD3 311 aaKnown RBP6.28□□□□□ -1.4
CDC42BPA-211ENST00000466538 DUSP15Q9H1R2 295 aaPredicted RBP6.28□□□□□ -1.4
CDC42BPA-211ENST00000466538 NKX2-4Q9H2Z4 354 aa6.28□□□□□ -1.4
CDC42BPA-211ENST00000466538 SNX11Q9Y5W9 270 aa6.28□□□□□ -1.4
CDC42BPA-211ENST00000466538 ST14Q9Y5Y6 855 aa6.28□□□□□ -1.4
CDC42BPA-211ENST00000466538 DNAJC6O75061 913 aa6.27□□□□□ -1.41
CDC42BPA-211ENST00000466538 IBSPP21815 317 aaPredicted RBP6.27□□□□□ -1.41
CDC42BPA-211ENST00000466538 GRIA2P42262 883 aa6.27□□□□□ -1.41
CDC42BPA-211ENST00000466538 NKPD1Q17RQ9 610 aa6.27□□□□□ -1.41
CDC42BPA-211ENST00000466538 TKFCQ3LXA3 575 aa6.27□□□□□ -1.41
CDC42BPA-211ENST00000466538 YOD1Q5VVQ6 348 aaPredicted RBP6.27□□□□□ -1.41
CDC42BPA-211ENST00000466538 SHISA5Q8N114 240 aa6.27□□□□□ -1.41
CDC42BPA-211ENST00000466538 SHKBP1Q8TBC3 707 aa6.27□□□□□ -1.41
CDC42BPA-211ENST00000466538 NINJ1Q92982 152 aa6.27□□□□□ -1.41
CDC42BPA-211ENST00000466538 IER2Q9BTL4 223 aa6.27□□□□□ -1.41
CDC42BPA-211ENST00000466538 NCOA5Q9HCD5 579 aaKnown RBP6.27□□□□□ -1.41
CDC42BPA-211ENST00000466538 IFT57Q9NWB7 429 aa6.27□□□□□ -1.41
CDC42BPA-211ENST00000466538 KCNQ2O43526 872 aa6.26□□□□□ -1.41
CDC42BPA-211ENST00000466538 ITGB2P05107 769 aa6.26□□□□□ -1.41
CDC42BPA-211ENST00000466538 FSTP19883 344 aa6.26□□□□□ -1.41
CDC42BPA-211ENST00000466538 BMP8BP34820 402 aa6.26□□□□□ -1.41
CDC42BPA-211ENST00000466538 CLCN7P51798 805 aa6.26□□□□□ -1.41
CDC42BPA-211ENST00000466538 GFRA1P56159 465 aa6.26□□□□□ -1.41
CDC42BPA-211ENST00000466538 PTPROQ16827 1216 aa6.26□□□□□ -1.41
CDC42BPA-211ENST00000466538 TSPYL5Q86VY4 417 aaPredicted RBP6.26□□□□□ -1.41
CDC42BPA-211ENST00000466538 LINC00116Q8NCU8 138 aa6.26□□□□□ -1.41
CDC42BPA-211ENST00000466538 ZDHHC15Q96MV8 337 aa6.26□□□□□ -1.41
CDC42BPA-211ENST00000466538 LGR4Q9BXB1 951 aa6.26□□□□□ -1.41
CDC42BPA-211ENST00000466538 RNF112Q9ULX5 631 aa6.26□□□□□ -1.41
CDC42BPA-211ENST00000466538 CD2APQ9Y5K6 639 aa6.26□□□□□ -1.41
CDC42BPA-211ENST00000466538 TMEM265A0A087WTH1 108 aa6.25□□□□□ -1.41
CDC42BPA-211ENST00000466538 SHISA3A0PJX4 238 aa6.25□□□□□ -1.41
CDC42BPA-211ENST00000466538 H0Y8X5 98 aa6.25□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms