RNA–Protein interactions for RNA: ENST00000466392.1

EDEM3-204, Transcript of ER degradation enhancing alpha-mannosidase like protein 3, humanhuman

TSL 5

Gene EDEM3, Length 491 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDEM3-204ENST00000466392 CCDC96Q2M329 555 aa13.91□□□□□ -0.18
EDEM3-204ENST00000466392 SNRNP48Q6IEG0 339 aaKnown RBP13.91□□□□□ -0.18
EDEM3-204ENST00000466392 TTBK2Q6IQ55 1244 aa13.91□□□□□ -0.18
EDEM3-204ENST00000466392 STOX1Q6ZVD7 989 aa13.91□□□□□ -0.18
EDEM3-204ENST00000466392 CYB5R4Q7L1T6 521 aa13.91□□□□□ -0.18
EDEM3-204ENST00000466392 PRPF38AQ8NAV1 312 aaKnown RBP13.91□□□□□ -0.18
EDEM3-204ENST00000466392 SHISA4Q96DD7 197 aa13.91□□□□□ -0.18
EDEM3-204ENST00000466392 GMCL1Q96IK5 515 aa13.91□□□□□ -0.18
EDEM3-204ENST00000466392 APBA2Q99767 749 aa13.91□□□□□ -0.18
EDEM3-204ENST00000466392 FEM1BQ9UK73 627 aa13.91□□□□□ -0.18
EDEM3-204ENST00000466392 SYNPO2Q9UMS6 1093 aa13.91□□□□□ -0.18
EDEM3-204ENST00000466392 RBM8AQ9Y5S9 174 aaKnown RBP13.91□□□□□ -0.18
EDEM3-204ENST00000466392 IVNS1ABPQ9Y6Y0 642 aa13.91□□□□□ -0.18
EDEM3-204ENST00000466392 TNRC18O15417 2968 aaPredicted RBP13.91□□□□□ -0.18
EDEM3-204ENST00000466392 SLC15A5A6NIM6 579 aa13.9□□□□□ -0.18
EDEM3-204ENST00000466392 ZKSCAN1P17029 563 aaPredicted RBP13.9□□□□□ -0.18
EDEM3-204ENST00000466392 STAT3P40763 770 aa13.9□□□□□ -0.18
EDEM3-204ENST00000466392 STAT2P52630 851 aa13.9□□□□□ -0.18
EDEM3-204ENST00000466392 RIOX2Q8IUF8 465 aa13.9□□□□□ -0.18
EDEM3-204ENST00000466392 SHCBP1Q8NEM2 672 aa13.9□□□□□ -0.18
EDEM3-204ENST00000466392 MAP4K1Q92918 833 aa13.9□□□□□ -0.18
EDEM3-204ENST00000466392 LSG1Q9H089 658 aaKnown RBP13.9□□□□□ -0.18
EDEM3-204ENST00000466392 GPCPD1Q9NPB8 672 aa13.9□□□□□ -0.18
EDEM3-204ENST00000466392 U3KPZ7 1027 aaPredicted RBP13.9□□□□□ -0.18
EDEM3-204ENST00000466392 TNKSO95271 1327 aa13.9□□□□□ -0.19
EDEM3-204ENST00000466392 E7EWF7 191 aa13.89□□□□□ -0.19
EDEM3-204ENST00000466392 COBLO75128 1261 aa13.89□□□□□ -0.19
EDEM3-204ENST00000466392 ZBED4O75132 1171 aa13.89□□□□□ -0.19
EDEM3-204ENST00000466392 PGK2P07205 417 aa13.89□□□□□ -0.19
EDEM3-204ENST00000466392 PRKAR2AP13861 404 aaKnown RBP13.89□□□□□ -0.19
EDEM3-204ENST00000466392 COL9A3Q14050 684 aaPredicted RBP13.89□□□□□ -0.19
EDEM3-204ENST00000466392 PPP4R3BQ5MIZ7 849 aa13.89□□□□□ -0.19
EDEM3-204ENST00000466392 CCDC174Q6PII3 467 aa13.89□□□□□ -0.19
EDEM3-204ENST00000466392 CHST3Q7LGC8 479 aa13.89□□□□□ -0.19
EDEM3-204ENST00000466392 ENAHQ8N8S7 591 aaPredicted RBP13.89□□□□□ -0.19
EDEM3-204ENST00000466392 DEFB118Q96PH6 123 aa13.89□□□□□ -0.19
EDEM3-204ENST00000466392 ZSCAN10Q96SZ4 725 aaPredicted RBP13.89□□□□□ -0.19
EDEM3-204ENST00000466392 MMP19Q99542 508 aa13.89□□□□□ -0.19
EDEM3-204ENST00000466392 CPVLQ9H3G5 476 aa13.89□□□□□ -0.19
EDEM3-204ENST00000466392 MROH8Q9H579 483 aa13.89□□□□□ -0.19
EDEM3-204ENST00000466392 SLC38A10Q9HBR0 1119 aa13.89□□□□□ -0.19
EDEM3-204ENST00000466392 ANO2Q9NQ90 1003 aa13.89□□□□□ -0.19
EDEM3-204ENST00000466392 HOMER2Q9NSB8 354 aa13.89□□□□□ -0.19
EDEM3-204ENST00000466392 PRR12Q9ULL5 1215 aa13.89□□□□□ -0.19
EDEM3-204ENST00000466392 CTDP1Q9Y5B0 961 aaPredicted RBP13.89□□□□□ -0.19
EDEM3-204ENST00000466392 GOLGA8HP0CJ92 632 aa13.88□□□□□ -0.19
EDEM3-204ENST00000466392 PDHBP11177 359 aa13.88□□□□□ -0.19
EDEM3-204ENST00000466392 XRCC5P13010 732 aaKnown RBP13.88□□□□□ -0.19
EDEM3-204ENST00000466392 CCND3P30281 292 aaPredicted RBP13.88□□□□□ -0.19
EDEM3-204ENST00000466392 CYP2C19P33261 490 aa13.88□□□□□ -0.19
EDEM3-204ENST00000466392 CACNB2Q08289 660 aaPredicted RBP13.88□□□□□ -0.19
EDEM3-204ENST00000466392 DPP9Q86TI2 863 aa13.88□□□□□ -0.19
EDEM3-204ENST00000466392 IQCA1Q86XH1 822 aa13.88□□□□□ -0.19
EDEM3-204ENST00000466392 U2AF1L4Q8WU68 220 aaKnown RBP13.88□□□□□ -0.19
EDEM3-204ENST00000466392 DCAF4Q8WV16 495 aa13.88□□□□□ -0.19
EDEM3-204ENST00000466392 AGBL1Q96MI9 1066 aa13.88□□□□□ -0.19
EDEM3-204ENST00000466392 TEX13BQ9BXU2 312 aa13.88□□□□□ -0.19
EDEM3-204ENST00000466392 KRT23Q9C075 422 aa13.88□□□□□ -0.19
EDEM3-204ENST00000466392 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.88□□□□□ -0.19
EDEM3-204ENST00000466392 CNNM2Q9H8M5 875 aa13.88□□□□□ -0.19
EDEM3-204ENST00000466392 PPP4R2Q9NY27 417 aa13.88□□□□□ -0.19
EDEM3-204ENST00000466392 LCTP09848 1927 aa13.88□□□□□ -0.19
EDEM3-204ENST00000466392 ZNF536O15090 1300 aa13.88□□□□□ -0.19
EDEM3-204ENST00000466392 CDC45O75419 566 aa13.87□□□□□ -0.19
EDEM3-204ENST00000466392 SLC25A27O95847 323 aa13.87□□□□□ -0.19
EDEM3-204ENST00000466392 GJB1P08034 283 aa13.87□□□□□ -0.19
EDEM3-204ENST00000466392 FCER1AP12319 257 aa13.87□□□□□ -0.19
EDEM3-204ENST00000466392 KIAA1211Q6ZU35 1233 aa13.87□□□□□ -0.19
EDEM3-204ENST00000466392 FAM160B2Q86V87 743 aa13.87□□□□□ -0.19
EDEM3-204ENST00000466392 PNMA1Q8ND90 353 aa13.87□□□□□ -0.19
EDEM3-204ENST00000466392 CHURC1Q8WUH1 139 aa13.87□□□□□ -0.19
EDEM3-204ENST00000466392 TTC14Q96N46 770 aa13.87□□□□□ -0.19
EDEM3-204ENST00000466392 SENP2Q9HC62 589 aa13.87□□□□□ -0.19
EDEM3-204ENST00000466392 PAK6Q9NQU5 681 aaPredicted RBP13.87□□□□□ -0.19
EDEM3-204ENST00000466392 MYH6P13533 1939 aa13.87□□□□□ -0.19
EDEM3-204ENST00000466392 MCM3APO60318 1980 aa13.87□□□□□ -0.19
EDEM3-204ENST00000466392 SLC27A2O14975 620 aa13.86□□□□□ -0.19
EDEM3-204ENST00000466392 STRNO43815 780 aa13.86□□□□□ -0.19
EDEM3-204ENST00000466392 HOXC6P09630 235 aa13.86□□□□□ -0.19
EDEM3-204ENST00000466392 GJA8P48165 433 aa13.86□□□□□ -0.19
EDEM3-204ENST00000466392 ZNF543Q08ER8 600 aa13.86□□□□□ -0.19
EDEM3-204ENST00000466392 KCTD2Q14681 263 aa13.86□□□□□ -0.19
EDEM3-204ENST00000466392 SEC23AQ15436 765 aa13.86□□□□□ -0.19
EDEM3-204ENST00000466392 MAP3K21Q5TCX8 1036 aa13.86□□□□□ -0.19
EDEM3-204ENST00000466392 DGKHQ86XP1 1220 aa13.86□□□□□ -0.19
EDEM3-204ENST00000466392 UBAC1Q9BSL1 405 aa13.86□□□□□ -0.19
EDEM3-204ENST00000466392 KAT14Q9H8E8 782 aa13.86□□□□□ -0.19
EDEM3-204ENST00000466392 HMX1Q9NP08 348 aaPredicted RBP13.86□□□□□ -0.19
EDEM3-204ENST00000466392 RPTORQ8N122 1335 aa13.86□□□□□ -0.19
EDEM3-204ENST00000466392 ATP2A1O14983 1001 aa13.85□□□□□ -0.19
EDEM3-204ENST00000466392 SGPL1O95470 568 aa13.85□□□□□ -0.19
EDEM3-204ENST00000466392 SNHG28P0DPA3 235 aa13.85□□□□□ -0.19
EDEM3-204ENST00000466392 ALAS1P13196 640 aa13.85□□□□□ -0.19
EDEM3-204ENST00000466392 ANTXR2P58335 489 aa13.85□□□□□ -0.19
EDEM3-204ENST00000466392 TRDNQ13061 729 aa13.85□□□□□ -0.19
EDEM3-204ENST00000466392 PRAMEF19Q5SWL8 479 aa13.85□□□□□ -0.19
EDEM3-204ENST00000466392 SYDE2Q5VT97 1194 aa13.85□□□□□ -0.19
EDEM3-204ENST00000466392 CREB3L3Q68CJ9 461 aa13.85□□□□□ -0.19
EDEM3-204ENST00000466392 RALYLQ86SE5 291 aaKnown RBP13.85□□□□□ -0.19
EDEM3-204ENST00000466392 TRPV1Q8NER1 839 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms