RNA–Protein interactions for RNA: ENST00000466141.1

RPUSD3-212, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 2

Gene RPUSD3, Length 996 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-212ENST00000466141 TTC39AQ5SRH9 613 aa8.55□□□□□ -1.04
RPUSD3-212ENST00000466141 CLASRPQ8N2M8 674 aaKnown RBP8.55□□□□□ -1.04
RPUSD3-212ENST00000466141 USP38Q8NB14 1042 aa8.55□□□□□ -1.04
RPUSD3-212ENST00000466141 P2RX7Q99572 595 aaKnown RBP8.55□□□□□ -1.04
RPUSD3-212ENST00000466141 NUDT12Q9BQG2 462 aa8.55□□□□□ -1.04
RPUSD3-212ENST00000466141 PORCNQ9H237 461 aa8.55□□□□□ -1.04
RPUSD3-212ENST00000466141 XPO5Q9HAV4 1204 aaKnown RBP eCLIP8.55□□□□□ -1.04
RPUSD3-212ENST00000466141 MROH7-TTC4A0A0A0MT08 1334 aa8.54□□□□□ -1.04
RPUSD3-212ENST00000466141 BAZ2AQ9UIF9 1905 aaKnown RBP8.54□□□□□ -1.04
RPUSD3-212ENST00000466141 CYP2E1P05181 493 aaPredicted RBP8.54□□□□□ -1.04
RPUSD3-212ENST00000466141 XRCC5P13010 732 aaKnown RBP8.54□□□□□ -1.04
RPUSD3-212ENST00000466141 ZAP70P43403 619 aa8.54□□□□□ -1.04
RPUSD3-212ENST00000466141 RTP1P59025 263 aa8.54□□□□□ -1.04
RPUSD3-212ENST00000466141 JAG1P78504 1218 aa8.54□□□□□ -1.04
RPUSD3-212ENST00000466141 PABPC4Q13310 644 aaKnown RBP eCLIP8.54□□□□□ -1.042e-8■■■■■ 44.1
RPUSD3-212ENST00000466141 MTMR2Q13614 643 aa8.54□□□□□ -1.04
RPUSD3-212ENST00000466141 SHROOM1Q2M3G4 852 aaPredicted RBP8.54□□□□□ -1.04
RPUSD3-212ENST00000466141 Q3C1V9 767 aa8.54□□□□□ -1.04
RPUSD3-212ENST00000466141 CCDC158Q5M9N0 1113 aa8.54□□□□□ -1.04
RPUSD3-212ENST00000466141 L1TD1Q5T7N2 865 aaKnown RBP8.54□□□□□ -1.04
RPUSD3-212ENST00000466141 CTR9Q6PD62 1173 aa8.54□□□□□ -1.04
RPUSD3-212ENST00000466141 POTEEQ6S8J3 1075 aa8.54□□□□□ -1.04
RPUSD3-212ENST00000466141 DZIP1Q86YF9 867 aaKnown RBP8.54□□□□□ -1.04
RPUSD3-212ENST00000466141 LSM14AQ8ND56 463 aaKnown RBP8.54□□□□□ -1.04
RPUSD3-212ENST00000466141 EXOC6Q8TAG9 804 aa8.54□□□□□ -1.04
RPUSD3-212ENST00000466141 SOCS4Q8WXH5 440 aa8.54□□□□□ -1.04
RPUSD3-212ENST00000466141 USP6NLQ92738 828 aa8.54□□□□□ -1.04
RPUSD3-212ENST00000466141 FAM163AQ96GL9 167 aaPredicted RBP8.54□□□□□ -1.04
RPUSD3-212ENST00000466141 BORCS6Q96GS4 357 aa8.54□□□□□ -1.04
RPUSD3-212ENST00000466141 LRRCC1Q9C099 1032 aa8.54□□□□□ -1.04
RPUSD3-212ENST00000466141 VRTNQ9H8Y1 702 aa8.54□□□□□ -1.04
RPUSD3-212ENST00000466141 RRAGDQ9NQL2 400 aaPredicted RBP8.54□□□□□ -1.04
RPUSD3-212ENST00000466141 FAM13BQ9NYF5 915 aa8.54□□□□□ -1.04
RPUSD3-212ENST00000466141 FLRT1Q9NZU1 646 aa8.54□□□□□ -1.04
RPUSD3-212ENST00000466141 PNMA2Q9UL42 364 aa8.54□□□□□ -1.04
RPUSD3-212ENST00000466141 ATP11BQ9Y2G3 1177 aa8.54□□□□□ -1.04
RPUSD3-212ENST00000466141 NDUFB9Q9Y6M9 179 aa8.54□□□□□ -1.04
RPUSD3-212ENST00000466141 SALL3Q9BXA9 1300 aa8.54□□□□□ -1.04
RPUSD3-212ENST00000466141 SYNRGQ9UMZ2 1314 aa8.54□□□□□ -1.04
RPUSD3-212ENST00000466141 CTAGE5O15320 804 aa8.53□□□□□ -1.04
RPUSD3-212ENST00000466141 EIF3JO75822 258 aaKnown RBP8.53□□□□□ -1.04
RPUSD3-212ENST00000466141 ZSCAN20P17040 1043 aaPredicted RBP8.53□□□□□ -1.04
RPUSD3-212ENST00000466141 HERVK_113P62684 666 aa8.53□□□□□ -1.04
RPUSD3-212ENST00000466141 IGBP1P78318 339 aa8.53□□□□□ -1.04
RPUSD3-212ENST00000466141 MECOMQ03112 1051 aa8.53□□□□□ -1.04
RPUSD3-212ENST00000466141 AMHR2Q16671 573 aa8.53□□□□□ -1.04
RPUSD3-212ENST00000466141 SH3D19Q5HYK7 790 aa8.53□□□□□ -1.04
RPUSD3-212ENST00000466141 MORN1Q5T089 497 aa8.53□□□□□ -1.04
RPUSD3-212ENST00000466141 MAMSTRQ6ZN01 415 aa8.53□□□□□ -1.04
RPUSD3-212ENST00000466141 TBC1D9Q6ZT07 1266 aa8.53□□□□□ -1.04
RPUSD3-212ENST00000466141 GPR142Q7Z601 462 aa8.53□□□□□ -1.04
RPUSD3-212ENST00000466141 NOP9Q86U38 636 aaKnown RBP8.53□□□□□ -1.04
RPUSD3-212ENST00000466141 GPRC5AQ8NFJ5 357 aa8.53□□□□□ -1.04
RPUSD3-212ENST00000466141 PPIL4Q8WUA2 492 aaKnown RBP eCLIP8.53□□□□□ -1.04
RPUSD3-212ENST00000466141 SYMPKQ92797 1274 aaKnown RBP8.53□□□□□ -1.04
RPUSD3-212ENST00000466141 BADQ92934 168 aa8.53□□□□□ -1.04
RPUSD3-212ENST00000466141 NSUN4Q96CB9 384 aaKnown RBP8.53□□□□□ -1.04
RPUSD3-212ENST00000466141 FAM122AQ96E09 287 aa8.53□□□□□ -1.04
RPUSD3-212ENST00000466141 APBA2Q99767 749 aa8.53□□□□□ -1.04
RPUSD3-212ENST00000466141 PAGR1Q9BTK6 254 aa8.53□□□□□ -1.04
RPUSD3-212ENST00000466141 OSBPL5Q9H0X9 879 aaPredicted RBP8.53□□□□□ -1.04
RPUSD3-212ENST00000466141 PIH1D3Q9NQM4 214 aaKnown RBP8.53□□□□□ -1.04
RPUSD3-212ENST00000466141 PRDM5Q9NQX1 630 aaPredicted RBP8.53□□□□□ -1.04
RPUSD3-212ENST00000466141 SNRKQ9NRH2 765 aa8.53□□□□□ -1.04
RPUSD3-212ENST00000466141 KLHL42Q9P2K6 505 aa8.53□□□□□ -1.04
RPUSD3-212ENST00000466141 RBPJLQ9UBG7 517 aa8.53□□□□□ -1.04
RPUSD3-212ENST00000466141 PRKAG2Q9UGJ0 569 aa8.53□□□□□ -1.04
RPUSD3-212ENST00000466141 WDR3Q9UNX4 943 aaKnown RBP eCLIP8.53□□□□□ -1.04
RPUSD3-212ENST00000466141 USP17L5A8MUK1 530 aa8.52□□□□□ -1.05
RPUSD3-212ENST00000466141 TNFRSF10AO00220 468 aa8.52□□□□□ -1.05
RPUSD3-212ENST00000466141 IFIT2P09913 472 aaKnown RBP8.52□□□□□ -1.05
RPUSD3-212ENST00000466141 PRR29P0C7W0 189 aa8.52□□□□□ -1.05
RPUSD3-212ENST00000466141 CNGA1P29973 690 aa8.52□□□□□ -1.05
RPUSD3-212ENST00000466141 CAP2P40123 477 aa8.52□□□□□ -1.05
RPUSD3-212ENST00000466141 RGS2P41220 211 aa8.52□□□□□ -1.05
RPUSD3-212ENST00000466141 CD151P48509 253 aa8.52□□□□□ -1.05
RPUSD3-212ENST00000466141 IRX5P78411 483 aaPredicted RBP8.52□□□□□ -1.05
RPUSD3-212ENST00000466141 TJAP1Q5JTD0 557 aa8.52□□□□□ -1.05
RPUSD3-212ENST00000466141 SH3RF1Q7Z6J0 888 aa8.52□□□□□ -1.05
RPUSD3-212ENST00000466141 PLEKHH3Q7Z736 793 aa8.52□□□□□ -1.05
RPUSD3-212ENST00000466141 NCAPGQ9BPX3 1015 aa8.52□□□□□ -1.05
RPUSD3-212ENST00000466141 TMA7Q9Y2S6 64 aaKnown RBP8.52□□□□□ -1.05
RPUSD3-212ENST00000466141 COMMD10Q9Y6G5 202 aa8.52□□□□□ -1.05
RPUSD3-212ENST00000466141 DNAH12Q6ZR08 3092 aa8.51□□□□□ -1.05
RPUSD3-212ENST00000466141 TMEM265A0A087WTH1 108 aa8.51□□□□□ -1.05
RPUSD3-212ENST00000466141 GPR75-ASB3A0A0A6YYF3 556 aa8.51□□□□□ -1.05
RPUSD3-212ENST00000466141 STK10O94804 968 aaKnown RBP8.51□□□□□ -1.05
RPUSD3-212ENST00000466141 IPO7O95373 1038 aaKnown RBP8.51□□□□□ -1.05
RPUSD3-212ENST00000466141 FAM200BP0CF97 657 aa8.51□□□□□ -1.05
RPUSD3-212ENST00000466141 ATP5JP18859 108 aa8.51□□□□□ -1.05
RPUSD3-212ENST00000466141 MAPK4P31152 587 aa8.51□□□□□ -1.05
RPUSD3-212ENST00000466141 PSMC1P62191 440 aaKnown RBP8.51□□□□□ -1.05
RPUSD3-212ENST00000466141 ERVK-9P63128 1117 aa8.51□□□□□ -1.05
RPUSD3-212ENST00000466141 ERVK-24P63145 666 aa8.51□□□□□ -1.05
RPUSD3-212ENST00000466141 SMAD3P84022 425 aaKnown RBP8.51□□□□□ -1.05
RPUSD3-212ENST00000466141 GRIN2CQ14957 1233 aa8.51□□□□□ -1.05
RPUSD3-212ENST00000466141 TRIM60Q495X7 471 aa8.51□□□□□ -1.05
RPUSD3-212ENST00000466141 HSP90B2PQ58FF3 399 aa8.51□□□□□ -1.05
RPUSD3-212ENST00000466141 GJC2Q5T442 439 aaPredicted RBP8.51□□□□□ -1.05
RPUSD3-212ENST00000466141 ANO1Q5XXA6 986 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms