RNA–Protein interactions for RNA: ENST00000465934.1

CACNA1C-224, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

TSL 4

Gene CACNA1C, Length 581 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-224ENST00000465934 SNRNP48Q6IEG0 339 aaKnown RBP16.68■□□□□ 0.26
CACNA1C-224ENST00000465934 CPXCR1Q8N123 301 aa16.68■□□□□ 0.26
CACNA1C-224ENST00000465934 PRPF38AQ8NAV1 312 aaKnown RBP16.68■□□□□ 0.26
CACNA1C-224ENST00000465934 TEX13BQ9BXU2 312 aa16.68■□□□□ 0.26
CACNA1C-224ENST00000465934 TSPY2A6NKD2 308 aa16.67■□□□□ 0.26
CACNA1C-224ENST00000465934 SDSP20132 328 aa16.67■□□□□ 0.26
CACNA1C-224ENST00000465934 SLC4A3P48751 1232 aa16.67■□□□□ 0.26
CACNA1C-224ENST00000465934 FXR1P51114 621 aaKnown RBP eCLIP16.67■□□□□ 0.26
CACNA1C-224ENST00000465934 KCTD2Q14681 263 aa16.67■□□□□ 0.26
CACNA1C-224ENST00000465934 PRO3102Q9H379 93 aa16.67■□□□□ 0.26
CACNA1C-224ENST00000465934 OSBPL3Q9H4L5 887 aa16.67■□□□□ 0.26
CACNA1C-224ENST00000465934 RAVER2Q9HCJ3 691 aaKnown RBP16.67■□□□□ 0.26
CACNA1C-224ENST00000465934 ISY1Q9ULR0 285 aaKnown RBP16.67■□□□□ 0.26
CACNA1C-224ENST00000465934 ZMYND8Q9ULU4 1186 aaPredicted RBP16.67■□□□□ 0.26
CACNA1C-224ENST00000465934 SYNPO2Q9UMS6 1093 aa16.67■□□□□ 0.26
CACNA1C-224ENST00000465934 STX8Q9UNK0 236 aa16.67■□□□□ 0.26
CACNA1C-224ENST00000465934 CCDC171Q6TFL3 1326 aa16.67■□□□□ 0.26
CACNA1C-224ENST00000465934 RANBP6O60518 1105 aaKnown RBP16.66■□□□□ 0.26
CACNA1C-224ENST00000465934 BMP3P12645 472 aa16.66■□□□□ 0.26
CACNA1C-224ENST00000465934 HAND2P61296 217 aa16.66■□□□□ 0.26
CACNA1C-224ENST00000465934 ZNF792Q3KQV3 632 aa16.66■□□□□ 0.26
CACNA1C-224ENST00000465934 SLC38A10Q9HBR0 1119 aa16.66■□□□□ 0.26
CACNA1C-224ENST00000465934 SLC5A4Q9NY91 659 aa16.66■□□□□ 0.26
CACNA1C-224ENST00000465934 FEM1BQ9UK73 627 aa16.66■□□□□ 0.26
CACNA1C-224ENST00000465934 SZT2Q5T011 3432 aa16.66■□□□□ 0.26
CACNA1C-224ENST00000465934 TMEM232C9JQI7 657 aa16.65■□□□□ 0.26
CACNA1C-224ENST00000465934 ORC4O43929 436 aa16.65■□□□□ 0.26
CACNA1C-224ENST00000465934 ZBED4O75132 1171 aa16.65■□□□□ 0.26
CACNA1C-224ENST00000465934 FGRP09769 529 aa16.65■□□□□ 0.26
CACNA1C-224ENST00000465934 SYN1P17600 705 aa16.65■□□□□ 0.26
CACNA1C-224ENST00000465934 MCCP23508 829 aa16.65■□□□□ 0.26
CACNA1C-224ENST00000465934 LRRC26Q2I0M4 334 aa16.65■□□□□ 0.26
CACNA1C-224ENST00000465934 RRP12Q5JTH9 1297 aaKnown RBP16.65■□□□□ 0.26
CACNA1C-224ENST00000465934 GMCL1Q96IK5 515 aa16.65■□□□□ 0.26
CACNA1C-224ENST00000465934 MTMR7Q9Y216 660 aa16.65■□□□□ 0.26
CACNA1C-224ENST00000465934 LAMA3Q16787 3333 aa16.65■□□□□ 0.26
CACNA1C-224ENST00000465934 COL11A1P12107 1806 aaPredicted RBP16.64■□□□□ 0.25
CACNA1C-224ENST00000465934 ATP2A1O14983 1001 aa16.64■□□□□ 0.25
CACNA1C-224ENST00000465934 SEPT4O43236 478 aa16.64■□□□□ 0.25
CACNA1C-224ENST00000465934 MSCO60682 206 aa16.64■□□□□ 0.25
CACNA1C-224ENST00000465934 TAL1P17542 331 aaPredicted RBP16.64■□□□□ 0.25
CACNA1C-224ENST00000465934 PDE4AP27815 886 aa16.64■□□□□ 0.25
CACNA1C-224ENST00000465934 COPB2P35606 906 aa16.64■□□□□ 0.25
CACNA1C-224ENST00000465934 SLC1A4P43007 532 aa16.64■□□□□ 0.25
CACNA1C-224ENST00000465934 GJC2Q5T442 439 aaPredicted RBP16.64■□□□□ 0.25
CACNA1C-224ENST00000465934 KCTD1Q719H9 257 aa16.64■□□□□ 0.25
CACNA1C-224ENST00000465934 TICAM2Q86XR7 235 aa16.64■□□□□ 0.25
CACNA1C-224ENST00000465934 TBC1D10CQ8IV04 446 aa16.64■□□□□ 0.25
CACNA1C-224ENST00000465934 TOMM22Q9NS69 142 aa16.64■□□□□ 0.25
CACNA1C-224ENST00000465934 ALPK3Q96L96 1907 aa16.64■□□□□ 0.25
CACNA1C-224ENST00000465934 TRIOBPQ9H2D6 2365 aa16.63■□□□□ 0.25
CACNA1C-224ENST00000465934 NOVP48745 357 aa16.63■□□□□ 0.25
CACNA1C-224ENST00000465934 STAT2P52630 851 aa16.63■□□□□ 0.25
CACNA1C-224ENST00000465934 SNAP25P60880 206 aa16.63■□□□□ 0.25
CACNA1C-224ENST00000465934 CWC27Q6UX04 472 aaKnown RBP16.63■□□□□ 0.25
CACNA1C-224ENST00000465934 TINF2Q9BSI4 451 aa16.63■□□□□ 0.25
CACNA1C-224ENST00000465934 SENP6Q9GZR1 1112 aaPredicted RBP16.63■□□□□ 0.25
CACNA1C-224ENST00000465934 HOMER2Q9NSB8 354 aa16.63■□□□□ 0.25
CACNA1C-224ENST00000465934 CTDP1Q9Y5B0 961 aaPredicted RBP16.63■□□□□ 0.25
CACNA1C-224ENST00000465934 ZMYM6O95789 1325 aa16.63■□□□□ 0.25
CACNA1C-224ENST00000465934 DNAJC25-GNG10A0A024R161 153 aa16.62■□□□□ 0.25
CACNA1C-224ENST00000465934 DNM1LO00429 736 aa16.62■□□□□ 0.25
CACNA1C-224ENST00000465934 MYCNP04198 464 aaPredicted RBP16.62■□□□□ 0.25
CACNA1C-224ENST00000465934 ATN1P54259 1190 aaPredicted RBP16.62■□□□□ 0.25
CACNA1C-224ENST00000465934 IKQ13123 557 aaPredicted RBP16.62■□□□□ 0.25
CACNA1C-224ENST00000465934 LENG1Q96BZ8 264 aaPredicted RBP16.62■□□□□ 0.25
CACNA1C-224ENST00000465934 DIS3Q9Y2L1 958 aaKnown RBP16.62■□□□□ 0.25
CACNA1C-224ENST00000465934 ZNF536O15090 1300 aa16.62■□□□□ 0.25
CACNA1C-224ENST00000465934 STAG1Q8WVM7 1258 aa16.61■□□□□ 0.25
CACNA1C-224ENST00000465934 DDX11Q96FC9 970 aa16.61■□□□□ 0.25
CACNA1C-224ENST00000465934 FGD4Q96M96 766 aa16.61■□□□□ 0.25
CACNA1C-224ENST00000465934 AGBL1Q96MI9 1066 aa16.61■□□□□ 0.25
CACNA1C-224ENST00000465934 IL25Q9H293 177 aa16.61■□□□□ 0.25
CACNA1C-224ENST00000465934 DIAPH3Q9NSV4 1193 aa16.61■□□□□ 0.25
CACNA1C-224ENST00000465934 NEDD4P46934 1319 aa16.61■□□□□ 0.25
CACNA1C-224ENST00000465934 MYH4Q9Y623 1939 aa16.6■□□□□ 0.25
CACNA1C-224ENST00000465934 ZNF865P0CJ78 1059 aaPredicted RBP16.6■□□□□ 0.25
CACNA1C-224ENST00000465934 GSPT1P15170 499 aaKnown RBP16.6■□□□□ 0.25
CACNA1C-224ENST00000465934 OAZ1P54368 228 aa16.6■□□□□ 0.25
CACNA1C-224ENST00000465934 PPP4R3BQ5MIZ7 849 aa16.6■□□□□ 0.25
CACNA1C-224ENST00000465934 AKNAD1Q5T1N1 836 aa16.6■□□□□ 0.25
CACNA1C-224ENST00000465934 TTBK2Q6IQ55 1244 aa16.6■□□□□ 0.25
CACNA1C-224ENST00000465934 RCSD1Q6JBY9 416 aa16.6■□□□□ 0.25
CACNA1C-224ENST00000465934 CCDC174Q6PII3 467 aa16.6■□□□□ 0.25
CACNA1C-224ENST00000465934 FAM160B2Q86V87 743 aa16.6■□□□□ 0.25
CACNA1C-224ENST00000465934 CHURC1Q8WUH1 139 aa16.6■□□□□ 0.25
CACNA1C-224ENST00000465934 GDF15Q99988 308 aa16.6■□□□□ 0.25
CACNA1C-224ENST00000465934 TMEM47Q9BQJ4 181 aa16.6■□□□□ 0.25
CACNA1C-224ENST00000465934 PRR12Q9ULL5 1215 aa16.6■□□□□ 0.25
CACNA1C-224ENST00000465934 FRMPD3Q5JV73 1810 aa16.6■□□□□ 0.25
CACNA1C-224ENST00000465934 SNAI1O95863 264 aaPredicted RBP16.59■□□□□ 0.25
CACNA1C-224ENST00000465934 SLC16A2P36021 539 aa16.59■□□□□ 0.25
CACNA1C-224ENST00000465934 MAGEA10P43363 369 aaPredicted RBP16.59■□□□□ 0.25
CACNA1C-224ENST00000465934 LRRC41Q15345 812 aa16.59■□□□□ 0.25
CACNA1C-224ENST00000465934 CCDC96Q2M329 555 aa16.59■□□□□ 0.25
CACNA1C-224ENST00000465934 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.59■□□□□ 0.25
CACNA1C-224ENST00000465934 ANKRD35Q8N283 1001 aa16.59■□□□□ 0.25
CACNA1C-224ENST00000465934 ARRDC4Q8NCT1 418 aa16.59■□□□□ 0.25
CACNA1C-224ENST00000465934 CHST13Q8NET6 341 aa16.59■□□□□ 0.25
CACNA1C-224ENST00000465934 NRBP1Q9UHY1 535 aa16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms