RNA–Protein interactions for RNA: ENST00000465756.5

NPHP3-203, Transcript of nephrocystin 3, humanhuman

TSL 5

Gene NPHP3, Length 3,852 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-203ENST00000465756 EHMT1Q9H9B1 1298 aa12.57□□□□□ -0.4
NPHP3-203ENST00000465756 SEC63Q9UGP8 760 aaKnown RBP12.57□□□□□ -0.4
NPHP3-203ENST00000465756 BAZ2AQ9UIF9 1905 aaKnown RBP12.57□□□□□ -0.4
NPHP3-203ENST00000465756 IGKV6D-41A0A0C4DH26 115 aa12.57□□□□□ -0.4
NPHP3-203ENST00000465756 B4E1Z4 1266 aa12.57□□□□□ -0.4
NPHP3-203ENST00000465756 PTPREP23469 700 aa12.57□□□□□ -0.4
NPHP3-203ENST00000465756 AKAP17AQ02040 695 aaKnown RBP12.57□□□□□ -0.4
NPHP3-203ENST00000465756 VPS53Q5VIR6 699 aa12.57□□□□□ -0.4
NPHP3-203ENST00000465756 GPR142Q7Z601 462 aa12.57□□□□□ -0.4
NPHP3-203ENST00000465756 CDK5RAP2Q96SN8 1893 aa12.57□□□□□ -0.4
NPHP3-203ENST00000465756 CYP2B6P20813 491 aa12.57□□□□□ -0.4
NPHP3-203ENST00000465756 CPXCR1Q8N123 301 aa12.57□□□□□ -0.4
NPHP3-203ENST00000465756 PNMA1Q8ND90 353 aa12.57□□□□□ -0.4
NPHP3-203ENST00000465756 DIS3Q9Y2L1 958 aaKnown RBP12.57□□□□□ -0.4
NPHP3-203ENST00000465756 LOC102724159A0A0B4J2E5 919 aa12.56□□□□□ -0.4
NPHP3-203ENST00000465756 PPP2R5BQ15173 497 aa12.56□□□□□ -0.4
NPHP3-203ENST00000465756 PWP2Q15269 919 aaKnown RBP12.56□□□□□ -0.4
NPHP3-203ENST00000465756 SNRNP48Q6IEG0 339 aaKnown RBP12.56□□□□□ -0.4
NPHP3-203ENST00000465756 SAMD3Q8N6K7 520 aa12.56□□□□□ -0.4
NPHP3-203ENST00000465756 IL27Q8NEV9 243 aa12.56□□□□□ -0.4
NPHP3-203ENST00000465756 RBM27Q9P2N5 1060 aaKnown RBP12.56□□□□□ -0.4
NPHP3-203ENST00000465756 MRPL11Q9Y3B7 192 aaKnown RBP12.56□□□□□ -0.4
NPHP3-203ENST00000465756 ASB14A6NK59 587 aa12.56□□□□□ -0.4
NPHP3-203ENST00000465756 BRDTQ58F21 947 aaPredicted RBP12.56□□□□□ -0.4
NPHP3-203ENST00000465756 RNF208Q9H0X6 261 aa12.56□□□□□ -0.4
NPHP3-203ENST00000465756 CCPG1Q9ULG6 757 aa12.56□□□□□ -0.4
NPHP3-203ENST00000465756 POTEB2H3BUK9 544 aa12.56□□□□□ -0.4
NPHP3-203ENST00000465756 MLLT1Q03111 559 aaPredicted RBP12.56□□□□□ -0.4
NPHP3-203ENST00000465756 PRKCZQ05513 592 aa12.56□□□□□ -0.4
NPHP3-203ENST00000465756 MAP4K1Q92918 833 aa12.56□□□□□ -0.4
NPHP3-203ENST00000465756 CUL5Q93034 780 aa12.56□□□□□ -0.4
NPHP3-203ENST00000465756 TMEM47Q9BQJ4 181 aa12.56□□□□□ -0.4
NPHP3-203ENST00000465756 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.56□□□□□ -0.4
NPHP3-203ENST00000465756 TNKSO95271 1327 aa12.55□□□□□ -0.4
NPHP3-203ENST00000465756 DDAH1O94760 285 aa12.55□□□□□ -0.4
NPHP3-203ENST00000465756 ECM2O94769 699 aaPredicted RBP12.55□□□□□ -0.4
NPHP3-203ENST00000465756 ANKS1AQ92625 1134 aa12.55□□□□□ -0.4
NPHP3-203ENST00000465756 RBPJLQ9UBG7 517 aa12.55□□□□□ -0.4
NPHP3-203ENST00000465756 LOC285556D6RIA3 1793 aa12.55□□□□□ -0.4
NPHP3-203ENST00000465756 ERCC3P19447 782 aa12.55□□□□□ -0.4
NPHP3-203ENST00000465756 MOV10L1Q9BXT6 1211 aaKnown RBP12.55□□□□□ -0.4
NPHP3-203ENST00000465756 A0A1W2PRG0 241 aa12.55□□□□□ -0.4
NPHP3-203ENST00000465756 VWA5AO00534 786 aa12.55□□□□□ -0.4
NPHP3-203ENST00000465756 ATP2A1O14983 1001 aa12.55□□□□□ -0.4
NPHP3-203ENST00000465756 ARRDC4Q8NCT1 418 aa12.55□□□□□ -0.4
NPHP3-203ENST00000465756 GPCPD1Q9NPB8 672 aa12.55□□□□□ -0.4
NPHP3-203ENST00000465756 NAP1L2Q9ULW6 460 aaPredicted RBP12.55□□□□□ -0.4
NPHP3-203ENST00000465756 NR2E3Q9Y5X4 410 aa12.55□□□□□ -0.4
NPHP3-203ENST00000465756 ABCB11O95342 1321 aa12.54□□□□□ -0.4
NPHP3-203ENST00000465756 WDR19Q8NEZ3 1342 aa12.54□□□□□ -0.4
NPHP3-203ENST00000465756 GLT8D2Q9H1C3 349 aa12.54□□□□□ -0.4
NPHP3-203ENST00000465756 R3HDMLQ9H3Y0 253 aa12.54□□□□□ -0.4
NPHP3-203ENST00000465756 RBM28Q9NW13 759 aaKnown RBP12.54□□□□□ -0.4
NPHP3-203ENST00000465756 SLC12A7Q9Y666 1083 aa12.54□□□□□ -0.4
NPHP3-203ENST00000465756 DDX60LQ5H9U9 1706 aaKnown RBP12.54□□□□□ -0.4
NPHP3-203ENST00000465756 RPTORQ8N122 1335 aa12.54□□□□□ -0.4
NPHP3-203ENST00000465756 TFRCP02786 760 aaKnown RBP12.54□□□□□ -0.4
NPHP3-203ENST00000465756 SLURP2P0DP57 97 aa12.54□□□□□ -0.4
NPHP3-203ENST00000465756 BLOC1S2Q6QNY1 142 aa12.54□□□□□ -0.4
NPHP3-203ENST00000465756 ALAS1P13196 640 aa12.54□□□□□ -0.4
NPHP3-203ENST00000465756 TEX2Q8IWB9 1127 aa12.54□□□□□ -0.4
NPHP3-203ENST00000465756 ANKLE1Q8NAG6 615 aa12.54□□□□□ -0.4
NPHP3-203ENST00000465756 NEK1Q96PY6 1258 aa12.54□□□□□ -0.4
NPHP3-203ENST00000465756 RNF146Q9NTX7 359 aa12.54□□□□□ -0.4
NPHP3-203ENST00000465756 INHAP05111 366 aa12.53□□□□□ -0.4
NPHP3-203ENST00000465756 TBC1D10CQ8IV04 446 aa12.53□□□□□ -0.4
NPHP3-203ENST00000465756 ZEB2O60315 1214 aa12.53□□□□□ -0.4
NPHP3-203ENST00000465756 CHGBP05060 677 aa12.53□□□□□ -0.4
NPHP3-203ENST00000465756 GJB1P08034 283 aa12.53□□□□□ -0.4
NPHP3-203ENST00000465756 OLFML2BQ68BL8 750 aa12.53□□□□□ -0.4
NPHP3-203ENST00000465756 CREB3L3Q68CJ9 461 aa12.53□□□□□ -0.4
NPHP3-203ENST00000465756 NUP133Q8WUM0 1156 aa12.53□□□□□ -0.4
NPHP3-203ENST00000465756 MAP3K14Q99558 947 aa12.53□□□□□ -0.4
NPHP3-203ENST00000465756 E7EWF7 191 aa12.53□□□□□ -0.4
NPHP3-203ENST00000465756 PRC1O43663 620 aa12.53□□□□□ -0.4
NPHP3-203ENST00000465756 CNGA1P29973 690 aa12.53□□□□□ -0.4
NPHP3-203ENST00000465756 ZNF543Q08ER8 600 aa12.53□□□□□ -0.4
NPHP3-203ENST00000465756 JAG1P78504 1218 aa12.52□□□□□ -0.4
NPHP3-203ENST00000465756 RRP36Q96EU6 259 aaKnown RBP12.52□□□□□ -0.4
NPHP3-203ENST00000465756 SLC38A10Q9HBR0 1119 aa12.52□□□□□ -0.4
NPHP3-203ENST00000465756 HOXC6P09630 235 aa12.52□□□□□ -0.41
NPHP3-203ENST00000465756 CCL5P13501 91 aa12.52□□□□□ -0.41
NPHP3-203ENST00000465756 BTNL9Q6UXG8 535 aa12.52□□□□□ -0.41
NPHP3-203ENST00000465756 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.52□□□□□ -0.41
NPHP3-203ENST00000465756 KBTBD13C9JR72 458 aa12.52□□□□□ -0.41
NPHP3-203ENST00000465756 GRB14Q14449 540 aa12.52□□□□□ -0.41
NPHP3-203ENST00000465756 CCDC174Q6PII3 467 aa12.52□□□□□ -0.41
NPHP3-203ENST00000465756 FBXO11Q86XK2 927 aa12.52□□□□□ -0.41
NPHP3-203ENST00000465756 CLEC10AQ8IUN9 316 aa12.52□□□□□ -0.41
NPHP3-203ENST00000465756 CCDC12Q8WUD4 166 aaPredicted RBP12.52□□□□□ -0.41
NPHP3-203ENST00000465756 ZNF333Q96JL9 665 aa12.52□□□□□ -0.41
NPHP3-203ENST00000465756 AMNQ9BXJ7 453 aa12.52□□□□□ -0.41
NPHP3-203ENST00000465756 ICAM1P05362 532 aa12.51□□□□□ -0.41
NPHP3-203ENST00000465756 ANKRD1Q15327 319 aa12.51□□□□□ -0.41
NPHP3-203ENST00000465756 MCTP2Q6DN12 878 aa12.51□□□□□ -0.41
NPHP3-203ENST00000465756 NSMFQ6X4W1 530 aa12.51□□□□□ -0.41
NPHP3-203ENST00000465756 RAVER2Q9HCJ3 691 aaKnown RBP12.51□□□□□ -0.41
NPHP3-203ENST00000465756 MAP3K20Q9NYL2 800 aaKnown RBP12.51□□□□□ -0.41
NPHP3-203ENST00000465756 PRR12Q9ULL5 1215 aa12.51□□□□□ -0.41
NPHP3-203ENST00000465756 SLC27A2O14975 620 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms