RNA–Protein interactions for RNA: ENST00000465563.5

SMC4-205, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 747 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-205ENST00000465563 SPON2Q9BUD6 331 aa9.03□□□□□ -0.96
SMC4-205ENST00000465563 ENDOUP21128 410 aaKnown RBP9.02□□□□□ -0.97
SMC4-205ENST00000465563 RTP1P59025 263 aa9.02□□□□□ -0.97
SMC4-205ENST00000465563 TTLL10Q6ZVT0 673 aa9.02□□□□□ -0.97
SMC4-205ENST00000465563 EAF1Q96JC9 268 aaPredicted RBP9.02□□□□□ -0.97
SMC4-205ENST00000465563 FCRL2Q96LA5 508 aaPredicted RBP9.02□□□□□ -0.97
SMC4-205ENST00000465563 SLC9A7Q96T83 725 aa9.02□□□□□ -0.97
SMC4-205ENST00000465563 SGPP1Q9BX95 441 aa9.02□□□□□ -0.97
SMC4-205ENST00000465563 GCM1Q9NP62 436 aa9.02□□□□□ -0.97
SMC4-205ENST00000465563 TNFRSF10DQ9UBN6 386 aa9.02□□□□□ -0.97
SMC4-205ENST00000465563 FBXL21Q9UKT6 434 aa9.02□□□□□ -0.97
SMC4-205ENST00000465563 CNOT6Q9ULM6 557 aaKnown RBP9.02□□□□□ -0.97
SMC4-205ENST00000465563 MINPP1Q9UNW1 487 aa9.02□□□□□ -0.97
SMC4-205ENST00000465563 PCDHB12Q9Y5F1 795 aa9.02□□□□□ -0.97
SMC4-205ENST00000465563 GFOD1Q9NXC2 390 aa9.01□□□□□ -0.97
SMC4-205ENST00000465563 HRKO00198 91 aa9□□□□□ -0.97
SMC4-205ENST00000465563 MEIS1O00470 390 aa9□□□□□ -0.97
SMC4-205ENST00000465563 PNLIPP16233 465 aa9□□□□□ -0.97
SMC4-205ENST00000465563 SRSF3P84103 164 aaKnown RBP9□□□□□ -0.97
SMC4-205ENST00000465563 AUHQ13825 339 aaKnown RBP9□□□□□ -0.97
SMC4-205ENST00000465563 LILRA6Q6PI73 481 aa9□□□□□ -0.97
SMC4-205ENST00000465563 DHRS1Q96LJ7 313 aa9□□□□□ -0.97
SMC4-205ENST00000465563 RAPGEFL1Q9UHV5 662 aa9□□□□□ -0.97
SMC4-205ENST00000465563 FADS2P1A8MWK0 482 aa8.99□□□□□ -0.97
SMC4-205ENST00000465563 ZNF16P17020 682 aaPredicted RBP8.99□□□□□ -0.97
SMC4-205ENST00000465563 BMP8BP34820 402 aa8.99□□□□□ -0.97
SMC4-205ENST00000465563 ZNF76P36508 570 aa8.99□□□□□ -0.97
SMC4-205ENST00000465563 LDLRAD1Q5T700 205 aa8.99□□□□□ -0.97
SMC4-205ENST00000465563 INTS3Q68E01 1043 aaKnown RBP8.99□□□□□ -0.97
SMC4-205ENST00000465563 GALNT18Q6P9A2 607 aa8.99□□□□□ -0.97
SMC4-205ENST00000465563 KRTAP4-9Q9BYQ8 210 aa8.99□□□□□ -0.97
SMC4-205ENST00000465563 SIRT5Q9NXA8 310 aa8.99□□□□□ -0.97
SMC4-205ENST00000465563 PRR13Q9NZ81 148 aa8.99□□□□□ -0.97
SMC4-205ENST00000465563 WTIPA6NIX2 430 aaPredicted RBP8.98□□□□□ -0.97
SMC4-205ENST00000465563 INHBBP09529 407 aa8.98□□□□□ -0.97
SMC4-205ENST00000465563 IMPDH2P12268 514 aa8.98□□□□□ -0.97
SMC4-205ENST00000465563 CTSKP43235 329 aa8.98□□□□□ -0.97
SMC4-205ENST00000465563 ZNF385BQ569K4 471 aa8.98□□□□□ -0.97
SMC4-205ENST00000465563 PLCD4Q9BRC7 762 aa8.98□□□□□ -0.97
SMC4-205ENST00000465563 CDADC1Q9BWV3 514 aa8.98□□□□□ -0.97
SMC4-205ENST00000465563 SUCOQ9UBS9 1254 aaKnown RBP8.98□□□□□ -0.97
SMC4-205ENST00000465563 ZNRF3Q9ULT6 936 aa8.98□□□□□ -0.97
SMC4-205ENST00000465563 KCTD3Q9Y597 815 aa8.98□□□□□ -0.97
SMC4-205ENST00000465563 TAF6LQ9Y6J9 622 aa8.98□□□□□ -0.97
SMC4-205ENST00000465563 KRTAP9-7A8MTY7 169 aa8.97□□□□□ -0.97
SMC4-205ENST00000465563 RFXAPO00287 272 aa8.97□□□□□ -0.97
SMC4-205ENST00000465563 ZNF205O95201 554 aa8.97□□□□□ -0.97
SMC4-205ENST00000465563 OLFML2BQ68BL8 750 aa8.97□□□□□ -0.97
SMC4-205ENST00000465563 MBD1Q9UIS9 605 aaPredicted RBP8.97□□□□□ -0.97
SMC4-205ENST00000465563 GPR55Q9Y2T6 319 aaPredicted RBP8.97□□□□□ -0.97
SMC4-205ENST00000465563 VAV1P15498 845 aa8.96□□□□□ -0.98
SMC4-205ENST00000465563 SDHBP21912 280 aa8.96□□□□□ -0.98
SMC4-205ENST00000465563 ARL4AP40617 200 aa8.96□□□□□ -0.98
SMC4-205ENST00000465563 HSF5Q4G112 596 aaPredicted RBP8.96□□□□□ -0.98
SMC4-205ENST00000465563 USP48Q86UV5 1035 aa8.96□□□□□ -0.98
SMC4-205ENST00000465563 C7orf61Q8IZ16 206 aa8.96□□□□□ -0.98
SMC4-205ENST00000465563 DSCC1Q9BVC3 393 aa8.96□□□□□ -0.98
SMC4-205ENST00000465563 ERVK13-1Q9NX77 482 aa8.96□□□□□ -0.98
SMC4-205ENST00000465563 FAM86C2PA6NEL3 165 aa8.95□□□□□ -0.98
SMC4-205ENST00000465563 ABLIM1O14639 778 aa8.95□□□□□ -0.98
SMC4-205ENST00000465563 GSNP06396 782 aa8.95□□□□□ -0.98
SMC4-205ENST00000465563 ACRP10323 421 aa8.95□□□□□ -0.98
SMC4-205ENST00000465563 VIPR1P32241 457 aa8.95□□□□□ -0.98
SMC4-205ENST00000465563 ERVFRD-1P60508 538 aa8.95□□□□□ -0.98
SMC4-205ENST00000465563 YBX1P67809 324 aaKnown RBP8.95□□□□□ -0.98
SMC4-205ENST00000465563 TCERG1LQ5VWI1 586 aa8.95□□□□□ -0.98
SMC4-205ENST00000465563 CCDC144CPQ8IYA2 1237 aa8.95□□□□□ -0.98
SMC4-205ENST00000465563 BACH2Q9BYV9 841 aa8.95□□□□□ -0.98
SMC4-205ENST00000465563 IRAK3Q9Y616 596 aa8.95□□□□□ -0.98
SMC4-205ENST00000465563 A0A1W2PQ45 241 aaPredicted RBP8.94□□□□□ -0.98
SMC4-205ENST00000465563 A0A1W2PQY0 241 aa8.94□□□□□ -0.98
SMC4-205ENST00000465563 MPOP05164 745 aa8.94□□□□□ -0.98
SMC4-205ENST00000465563 LAPTM5Q13571 262 aa8.94□□□□□ -0.98
SMC4-205ENST00000465563 SSPNQ14714 243 aa8.94□□□□□ -0.98
SMC4-205ENST00000465563 CRTC3Q6UUV7 619 aa8.94□□□□□ -0.98
SMC4-205ENST00000465563 SLCO6A1Q86UG4 719 aa8.94□□□□□ -0.98
SMC4-205ENST00000465563 TMEM151BQ8IW70 566 aa8.94□□□□□ -0.98
SMC4-205ENST00000465563 TAB3Q8N5C8 712 aaPredicted RBP8.94□□□□□ -0.98
SMC4-205ENST00000465563 SIGLEC10Q96LC7 697 aa8.94□□□□□ -0.98
SMC4-205ENST00000465563 FERD3LQ96RJ6 166 aa8.94□□□□□ -0.98
SMC4-205ENST00000465563 METTL5Q9NRN9 209 aaKnown RBP8.94□□□□□ -0.98
SMC4-205ENST00000465563 AP5S1Q9NUS5 200 aa8.94□□□□□ -0.98
SMC4-205ENST00000465563 C9IYK1 514 aa8.93□□□□□ -0.98
SMC4-205ENST00000465563 PRKCAP17252 672 aa8.93□□□□□ -0.98
SMC4-205ENST00000465563 PMS1P54277 932 aaKnown RBP8.93□□□□□ -0.98
SMC4-205ENST00000465563 FANCCQ00597 558 aa8.93□□□□□ -0.98
SMC4-205ENST00000465563 KIR3DS1Q14943 382 aa8.93□□□□□ -0.98
SMC4-205ENST00000465563 TMCO4Q5TGY1 634 aa8.93□□□□□ -0.98
SMC4-205ENST00000465563 TM9SF2Q99805 663 aa8.93□□□□□ -0.98
SMC4-205ENST00000465563 CNTD2Q9H8S5 307 aa8.93□□□□□ -0.98
SMC4-205ENST00000465563 N4BP3O15049 544 aa8.92□□□□□ -0.98
SMC4-205ENST00000465563 PI3P19957 117 aa8.92□□□□□ -0.98
SMC4-205ENST00000465563 CYP4F8P98187 520 aa8.92□□□□□ -0.98
SMC4-205ENST00000465563 TMEM62Q0P6H9 643 aa8.92□□□□□ -0.98
SMC4-205ENST00000465563 ZNF394Q53GI3 561 aa8.92□□□□□ -0.98
SMC4-205ENST00000465563 CWF19L1Q69YN2 538 aaKnown RBP8.92□□□□□ -0.98
SMC4-205ENST00000465563 SMARCC1Q92922 1105 aaPredicted RBP8.92□□□□□ -0.98
SMC4-205ENST00000465563 PARD6AQ9NPB6 346 aa8.92□□□□□ -0.98
SMC4-205ENST00000465563 SHOXO15266 292 aa8.91□□□□□ -0.98
SMC4-205ENST00000465563 BMP7P18075 431 aa8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms