RNA–Protein interactions for RNA: ENST00000465522.5

ITGA4-204, Transcript of integrin subunit alpha 4, humanhuman

TSL 2

Gene ITGA4, Length 1,721 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA4-204ENST00000465522 SH3GLB2Q9NR46 395 aa25.03■■□□□ 1.6
ITGA4-204ENST00000465522 NFKBIBQ15653 356 aa25.03■■□□□ 1.6
ITGA4-204ENST00000465522 BTNL9Q6UXG8 535 aa25.03■■□□□ 1.6
ITGA4-204ENST00000465522 HEATR3Q7Z4Q2 680 aa25.03■■□□□ 1.6
ITGA4-204ENST00000465522 PHF20Q9BVI0 1012 aa25.03■■□□□ 1.6
ITGA4-204ENST00000465522 PNMA6FA0A0J9YX94 578 aa25.02■■□□□ 1.6
ITGA4-204ENST00000465522 C19orf81C9J6K1 198 aa25.02■■□□□ 1.6
ITGA4-204ENST00000465522 KIF23Q02241 960 aaPredicted RBP25.02■■□□□ 1.6
ITGA4-204ENST00000465522 FMR1Q06787 632 aaKnown RBP eCLIP25.02■■□□□ 1.6
ITGA4-204ENST00000465522 WWC2Q6AWC2 1192 aa25.02■■□□□ 1.6
ITGA4-204ENST00000465522 CHURC1Q8WUH1 139 aa25.02■■□□□ 1.6
ITGA4-204ENST00000465522 CHAMP1Q96JM3 812 aa25.02■■□□□ 1.6
ITGA4-204ENST00000465522 BARHL2Q9NY43 387 aa25.02■■□□□ 1.6
ITGA4-204ENST00000465522 AFG3L2Q9Y4W6 797 aa25.02■■□□□ 1.6
ITGA4-204ENST00000465522 PHIPQ8WWQ0 1821 aa25.02■■□□□ 1.6
ITGA4-204ENST00000465522 OTOFQ9HC10 1997 aa25.01■■□□□ 1.59
ITGA4-204ENST00000465522 SYDE2Q5VT97 1194 aa25.01■■□□□ 1.59
ITGA4-204ENST00000465522 SHISA4Q96DD7 197 aa25.01■■□□□ 1.59
ITGA4-204ENST00000465522 MTMR8Q96EF0 704 aa25.01■■□□□ 1.59
ITGA4-204ENST00000465522 EMILIN3Q9NT22 766 aa25.01■■□□□ 1.59
ITGA4-204ENST00000465522 ZBTB5O15062 677 aa25■■□□□ 1.59
ITGA4-204ENST00000465522 WDR46O15213 610 aaKnown RBP25■■□□□ 1.59
ITGA4-204ENST00000465522 MCM4P33991 863 aa25■■□□□ 1.59
ITGA4-204ENST00000465522 NLRP5P59047 1200 aa25■■□□□ 1.59
ITGA4-204ENST00000465522 FAM173BQ6P4H8 233 aa25■■□□□ 1.59
ITGA4-204ENST00000465522 DIS3L2Q8IYB7 885 aaKnown RBP25■■□□□ 1.59
ITGA4-204ENST00000465522 ELP3Q9H9T3 547 aa25■■□□□ 1.59
ITGA4-204ENST00000465522 FEM1BQ9UK73 627 aa25■■□□□ 1.59
ITGA4-204ENST00000465522 PLA2G6O60733 806 aa25■■□□□ 1.59
ITGA4-204ENST00000465522 BRAPQ7Z569 592 aa25■■□□□ 1.59
ITGA4-204ENST00000465522 CCDC148Q8NFR7 591 aa25■■□□□ 1.59
ITGA4-204ENST00000465522 CLMNQ96JQ2 1002 aa25■■□□□ 1.59
ITGA4-204ENST00000465522 BTBD18B2RXH4 712 aa24.99■■□□□ 1.59
ITGA4-204ENST00000465522 KIF28PB7ZC32 967 aa24.99■■□□□ 1.59
ITGA4-204ENST00000465522 hCG_1984214I3L0E3 225 aa24.99■■□□□ 1.59
ITGA4-204ENST00000465522 STXBP3O00186 592 aa24.99■■□□□ 1.59
ITGA4-204ENST00000465522 U2AF2P26368 475 aaKnown RBP eCLIP24.99■■□□□ 1.59
ITGA4-204ENST00000465522 DNM1Q05193 864 aaKnown RBP24.99■■□□□ 1.59
ITGA4-204ENST00000465522 DGKZQ13574 1117 aa24.99■■□□□ 1.59
ITGA4-204ENST00000465522 FAM160B2Q86V87 743 aa24.99■■□□□ 1.59
ITGA4-204ENST00000465522 ERO1BQ86YB8 467 aa24.99■■□□□ 1.59
ITGA4-204ENST00000465522 ZNF713Q8N859 430 aaPredicted RBP24.99■■□□□ 1.59
ITGA4-204ENST00000465522 CCDC12Q8WUD4 166 aaPredicted RBP24.99■■□□□ 1.59
ITGA4-204ENST00000465522 BRMS1Q9HCU9 246 aa24.99■■□□□ 1.59
ITGA4-204ENST00000465522 PRR12Q9ULL5 1215 aa24.99■■□□□ 1.59
ITGA4-204ENST00000465522 PAPPA2Q9BXP8 1791 aa24.99■■□□□ 1.59
ITGA4-204ENST00000465522 GOLGA6L22H0YM25 854 aa24.98■■□□□ 1.59
ITGA4-204ENST00000465522 CALML3P27482 149 aa24.98■■□□□ 1.59
ITGA4-204ENST00000465522 HMGCS2P54868 508 aa24.98■■□□□ 1.59
ITGA4-204ENST00000465522 NAPAP54920 295 aa24.98■■□□□ 1.59
ITGA4-204ENST00000465522 FAM177A1Q8N128 213 aaPredicted RBP24.98■■□□□ 1.59
ITGA4-204ENST00000465522 RBM46Q8TBY0 533 aaKnown RBP24.98■■□□□ 1.59
ITGA4-204ENST00000465522 FOXP1Q9H334 677 aaPredicted RBP24.98■■□□□ 1.59
ITGA4-204ENST00000465522 VCAM1P19320 739 aa24.98■■□□□ 1.59
ITGA4-204ENST00000465522 NCLP19338 710 aaKnown RBP24.98■■□□□ 1.59
ITGA4-204ENST00000465522 KRT2P35908 639 aa24.98■■□□□ 1.59
ITGA4-204ENST00000465522 PPATQ06203 517 aa24.98■■□□□ 1.59
ITGA4-204ENST00000465522 CDC37Q16543 378 aaPredicted RBP24.98■■□□□ 1.59
ITGA4-204ENST00000465522 LDLRAD1Q5T700 205 aa24.98■■□□□ 1.59
ITGA4-204ENST00000465522 CHADLQ6NUI6 762 aa24.98■■□□□ 1.59
ITGA4-204ENST00000465522 KIFC2Q96AC6 838 aa24.98■■□□□ 1.59
ITGA4-204ENST00000465522 TMOD4Q9NZQ9 345 aa24.98■■□□□ 1.59
ITGA4-204ENST00000465522 QRICH1Q2TAL8 776 aa24.97■■□□□ 1.59
ITGA4-204ENST00000465522 TYW1BQ6NUM6 668 aa24.97■■□□□ 1.59
ITGA4-204ENST00000465522 CNKSR2Q8WXI2 1034 aa24.97■■□□□ 1.59
ITGA4-204ENST00000465522 COA7Q96BR5 231 aa24.97■■□□□ 1.59
ITGA4-204ENST00000465522 KRT85P78386 507 aa24.96■■□□□ 1.59
ITGA4-204ENST00000465522 SAMD1Q6SPF0 538 aaPredicted RBP24.96■■□□□ 1.59
ITGA4-204ENST00000465522 OTUD5Q96G74 571 aa24.96■■□□□ 1.59
ITGA4-204ENST00000465522 C12orf42Q96LP6 360 aa24.96■■□□□ 1.59
ITGA4-204ENST00000465522 TANGO6Q9C0B7 1094 aa24.96■■□□□ 1.59
ITGA4-204ENST00000465522 SPDYE5A6NIY4 337 aa24.95■■□□□ 1.59
ITGA4-204ENST00000465522 UNCXA6NJT0 531 aa24.95■■□□□ 1.59
ITGA4-204ENST00000465522 CELF2O95319 508 aaKnown RBP24.95■■□□□ 1.59
ITGA4-204ENST00000465522 SNAP25P60880 206 aa24.95■■□□□ 1.59
ITGA4-204ENST00000465522 FKBP1BP68106 108 aa24.95■■□□□ 1.59
ITGA4-204ENST00000465522 NR5A1Q13285 461 aa24.95■■□□□ 1.59
ITGA4-204ENST00000465522 GALNT17Q6IS24 598 aa24.95■■□□□ 1.59
ITGA4-204ENST00000465522 NOSTRINQ8IVI9 506 aa24.95■■□□□ 1.59
ITGA4-204ENST00000465522 OXER1Q8TDS5 423 aa24.95■■□□□ 1.59
ITGA4-204ENST00000465522 RPAP3Q9H6T3 665 aaPredicted RBP24.95■■□□□ 1.59
ITGA4-204ENST00000465522 GPBP1L1Q9HC44 474 aaPredicted RBP24.95■■□□□ 1.59
ITGA4-204ENST00000465522 GBA2Q9HCG7 927 aaPredicted RBP24.95■■□□□ 1.59
ITGA4-204ENST00000465522 FBXO28Q9NVF7 368 aa24.95■■□□□ 1.59
ITGA4-204ENST00000465522 CNPY2Q9Y2B0 182 aa24.95■■□□□ 1.59
ITGA4-204ENST00000465522 PPP1R11O60927 126 aaPredicted RBP24.95■■□□□ 1.58
ITGA4-204ENST00000465522 NPY5RQ15761 445 aa24.95■■□□□ 1.58
ITGA4-204ENST00000465522 SH3D19Q5HYK7 790 aa24.95■■□□□ 1.58
ITGA4-204ENST00000465522 C2orf69Q8N8R5 385 aa24.95■■□□□ 1.58
ITGA4-204ENST00000465522 PRPF38AQ8NAV1 312 aaKnown RBP24.95■■□□□ 1.58
ITGA4-204ENST00000465522 SLC10A4Q96EP9 437 aa24.95■■□□□ 1.58
ITGA4-204ENST00000465522 ZMYND12Q9H0C1 365 aa24.95■■□□□ 1.58
ITGA4-204ENST00000465522 TFIP11Q9UBB9 837 aaKnown RBP24.95■■□□□ 1.58
ITGA4-204ENST00000465522 SMCO2A6NFE2 343 aa24.94■■□□□ 1.58
ITGA4-204ENST00000465522 GNA11P29992 359 aa24.94■■□□□ 1.58
ITGA4-204ENST00000465522 BLIDQ8IZY5 108 aa24.94■■□□□ 1.58
ITGA4-204ENST00000465522 ZNF396Q96N95 335 aaPredicted RBP24.94■■□□□ 1.58
ITGA4-204ENST00000465522 SLF1Q9BQI6 1058 aa24.94■■□□□ 1.58
ITGA4-204ENST00000465522 C6orf50Q9HD87 102 aa24.94■■□□□ 1.58
ITGA4-204ENST00000465522 CFAP45Q9UL16 551 aa24.94■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms