RNA–Protein interactions for RNA: ENST00000465176.5

PCCB-205, Transcript of propionyl-CoA carboxylase subunit beta, humanhuman

TSL 5

Gene PCCB, Length 570 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCB-205ENST00000465176 TMEM179Q6ZVK1 233 aa11.94□□□□□ -0.5
PCCB-205ENST00000465176 OTOP2Q7RTS6 562 aa11.94□□□□□ -0.5
PCCB-205ENST00000465176 SPICE1Q8N0Z3 855 aa11.94□□□□□ -0.5
PCCB-205ENST00000465176 UPF3AQ9H1J1 476 aaKnown RBP11.94□□□□□ -0.5
PCCB-205ENST00000465176 GPR108Q9NPR9 543 aa11.94□□□□□ -0.5
PCCB-205ENST00000465176 ZHX1Q9UKY1 873 aaPredicted RBP11.94□□□□□ -0.5
PCCB-205ENST00000465176 NOB1Q9ULX3 412 aaKnown RBP11.94□□□□□ -0.5
PCCB-205ENST00000465176 FPGT-TNNI3KV9GXZ4 949 aa11.94□□□□□ -0.5
PCCB-205ENST00000465176 UMODL1Q5DID0 1318 aa11.93□□□□□ -0.5
PCCB-205ENST00000465176 PI4K2BG5E9Z4 385 aa11.93□□□□□ -0.5
PCCB-205ENST00000465176 ADCY6O43306 1168 aa11.93□□□□□ -0.5
PCCB-205ENST00000465176 GTPBP6O43824 516 aaPredicted RBP11.93□□□□□ -0.5
PCCB-205ENST00000465176 IDH1O75874 414 aaKnown RBP11.93□□□□□ -0.5
PCCB-205ENST00000465176 SNAI1O95863 264 aaPredicted RBP11.93□□□□□ -0.5
PCCB-205ENST00000465176 COPB2P35606 906 aa11.93□□□□□ -0.5
PCCB-205ENST00000465176 GJA9P57773 515 aa11.93□□□□□ -0.5
PCCB-205ENST00000465176 SAMD1Q6SPF0 538 aaPredicted RBP11.93□□□□□ -0.5
PCCB-205ENST00000465176 MAMDC4Q6UXC1 1216 aa11.93□□□□□ -0.5
PCCB-205ENST00000465176 SIAH1Q8IUQ4 282 aa11.93□□□□□ -0.5
PCCB-205ENST00000465176 MAGEB6Q8N7X4 407 aa11.93□□□□□ -0.5
PCCB-205ENST00000465176 VTI1AQ96AJ9 217 aa11.93□□□□□ -0.5
PCCB-205ENST00000465176 HIPK3Q9H422 1215 aa11.93□□□□□ -0.5
PCCB-205ENST00000465176 VCPKMTQ9H867 229 aa11.93□□□□□ -0.5
PCCB-205ENST00000465176 ZNF214Q9UL59 606 aaPredicted RBP11.93□□□□□ -0.5
PCCB-205ENST00000465176 TMX2Q9Y320 296 aa11.93□□□□□ -0.5
PCCB-205ENST00000465176 SLC4A7Q9Y6M7 1214 aa11.93□□□□□ -0.5
PCCB-205ENST00000465176 MCM3APO60318 1980 aa11.92□□□□□ -0.5
PCCB-205ENST00000465176 PNMA6EA0A0J9YXQ4 647 aa11.92□□□□□ -0.5
PCCB-205ENST00000465176 RFXAPO00287 272 aa11.92□□□□□ -0.5
PCCB-205ENST00000465176 POLR3DP05423 398 aaPredicted RBP11.92□□□□□ -0.5
PCCB-205ENST00000465176 STAT3P40763 770 aa11.92□□□□□ -0.5
PCCB-205ENST00000465176 MRE11P49959 708 aa11.92□□□□□ -0.5
PCCB-205ENST00000465176 EVX2Q03828 476 aa11.92□□□□□ -0.5
PCCB-205ENST00000465176 ICA1Q05084 483 aa11.92□□□□□ -0.5
PCCB-205ENST00000465176 TMED8Q6PL24 325 aaPredicted RBP11.92□□□□□ -0.5
PCCB-205ENST00000465176 CLEC10AQ8IUN9 316 aa11.92□□□□□ -0.5
PCCB-205ENST00000465176 SLC43A3Q8NBI5 491 aa11.92□□□□□ -0.5
PCCB-205ENST00000465176 REPS2Q8NFH8 660 aa11.92□□□□□ -0.5
PCCB-205ENST00000465176 RIOK1Q9BRS2 568 aaKnown RBP11.92□□□□□ -0.5
PCCB-205ENST00000465176 SH2D4AQ9H788 454 aa11.92□□□□□ -0.5
PCCB-205ENST00000465176 SPC25Q9HBM1 224 aa11.92□□□□□ -0.5
PCCB-205ENST00000465176 ARHGEF10LQ9HCE6 1279 aa11.92□□□□□ -0.5
PCCB-205ENST00000465176 FBXO28Q9NVF7 368 aa11.92□□□□□ -0.5
PCCB-205ENST00000465176 COL4A4P53420 1690 aaPredicted RBP11.91□□□□□ -0.5
PCCB-205ENST00000465176 BRWD1Q9NSI6 2320 aa11.91□□□□□ -0.5
PCCB-205ENST00000465176 DNAJC25-GNG10A0A024R161 153 aa11.91□□□□□ -0.5
PCCB-205ENST00000465176 EPOPA6NHQ4 379 aa11.91□□□□□ -0.5
PCCB-205ENST00000465176 PRR33A8MZF0 331 aa11.91□□□□□ -0.5
PCCB-205ENST00000465176 SMIM22K7EJ46 135 aa11.91□□□□□ -0.5
PCCB-205ENST00000465176 VWA5AO00534 786 aa11.91□□□□□ -0.5
PCCB-205ENST00000465176 CTAGE5O15320 804 aa11.91□□□□□ -0.5
PCCB-205ENST00000465176 ATP2A2P16615 1042 aaKnown RBP11.91□□□□□ -0.5
PCCB-205ENST00000465176 NKX3-2P78367 333 aa11.91□□□□□ -0.5
PCCB-205ENST00000465176 ACVR2BQ13705 512 aa11.91□□□□□ -0.5
PCCB-205ENST00000465176 GNASQ5JWF2 1037 aa11.91□□□□□ -0.5
PCCB-205ENST00000465176 KRT40Q6A162 431 aa11.91□□□□□ -0.5
PCCB-205ENST00000465176 ZNF467Q7Z7K2 595 aaPredicted RBP11.91□□□□□ -0.5
PCCB-205ENST00000465176 HLA-CQ95604 372 aa11.91□□□□□ -0.5
PCCB-205ENST00000465176 VWCEQ96DN2 955 aa11.91□□□□□ -0.5
PCCB-205ENST00000465176 NOC4LQ9BVI4 516 aaKnown RBP11.91□□□□□ -0.5
PCCB-205ENST00000465176 WNT8AQ9H1J5 351 aa11.91□□□□□ -0.5
PCCB-205ENST00000465176 PPP1R9AQ9ULJ8 1098 aa11.91□□□□□ -0.5
PCCB-205ENST00000465176 ZBBXA8MT70 800 aa11.9□□□□□ -0.5
PCCB-205ENST00000465176 CA3P07451 260 aa11.9□□□□□ -0.5
PCCB-205ENST00000465176 CCL23P55773 120 aa11.9□□□□□ -0.5
PCCB-205ENST00000465176 SLFN5Q08AF3 891 aa11.9□□□□□ -0.5
PCCB-205ENST00000465176 CCDC144BQ3MJ40 725 aa11.9□□□□□ -0.5
PCCB-205ENST00000465176 TMEM67Q5HYA8 995 aa11.9□□□□□ -0.5
PCCB-205ENST00000465176 CD320Q9NPF0 282 aa11.9□□□□□ -0.5
PCCB-205ENST00000465176 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.9□□□□□ -0.5
PCCB-205ENST00000465176 WDFY4Q6ZS81 3184 aa11.89□□□□□ -0.51
PCCB-205ENST00000465176 GNAI2P04899 355 aa11.89□□□□□ -0.51
PCCB-205ENST00000465176 AKR1B1P15121 316 aa11.89□□□□□ -0.51
PCCB-205ENST00000465176 RPUSD2Q8IZ73 545 aaKnown RBP11.89□□□□□ -0.51
PCCB-205ENST00000465176 FAM9BQ8IZU0 186 aa11.89□□□□□ -0.51
PCCB-205ENST00000465176 FGD4Q96M96 766 aa11.89□□□□□ -0.51
PCCB-205ENST00000465176 TEX13BQ9BXU2 312 aa11.89□□□□□ -0.51
PCCB-205ENST00000465176 ABHD16BQ9H3Z7 469 aa11.89□□□□□ -0.51
PCCB-205ENST00000465176 CERS4Q9HA82 394 aa11.89□□□□□ -0.51
PCCB-205ENST00000465176 MCM9Q9NXL9 1143 aa11.89□□□□□ -0.51
PCCB-205ENST00000465176 TLR7Q9NYK1 1049 aaKnown RBP11.89□□□□□ -0.51
PCCB-205ENST00000465176 SWAP70Q9UH65 585 aa11.89□□□□□ -0.51
PCCB-205ENST00000465176 DBNLQ9UJU6 430 aaKnown RBP11.89□□□□□ -0.51
PCCB-205ENST00000465176 CABYRO75952 493 aa11.88□□□□□ -0.51
PCCB-205ENST00000465176 PFKMP08237 780 aa11.88□□□□□ -0.51
PCCB-205ENST00000465176 NHLH1Q02575 133 aa11.88□□□□□ -0.51
PCCB-205ENST00000465176 TTLL4Q14679 1199 aa11.88□□□□□ -0.51
PCCB-205ENST00000465176 CXCL17Q6UXB2 119 aa11.88□□□□□ -0.51
PCCB-205ENST00000465176 DDX11Q96FC9 970 aa11.88□□□□□ -0.51
PCCB-205ENST00000465176 CRNKL1Q9BZJ0 848 aaKnown RBP11.88□□□□□ -0.51
PCCB-205ENST00000465176 KATNBL1Q9H079 304 aa11.88□□□□□ -0.51
PCCB-205ENST00000465176 ANTXR1Q9H6X2 564 aa11.88□□□□□ -0.51
PCCB-205ENST00000465176 ASTN1O14525 1302 aa11.87□□□□□ -0.51
PCCB-205ENST00000465176 GRIN2DO15399 1336 aa11.87□□□□□ -0.51
PCCB-205ENST00000465176 MAGEB6P1A0A0J9YX57 407 aa11.87□□□□□ -0.51
PCCB-205ENST00000465176 B4GALT4O60513 344 aa11.87□□□□□ -0.51
PCCB-205ENST00000465176 ARHGEF15O94989 841 aa11.87□□□□□ -0.51
PCCB-205ENST00000465176 CT47B1P0C2W7 299 aaPredicted RBP11.87□□□□□ -0.51
PCCB-205ENST00000465176 CYP2D6P10635 497 aa11.87□□□□□ -0.51
PCCB-205ENST00000465176 BEX3Q00994 111 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms