RNA–Protein interactions for RNA: ENST00000465135.1

C1orf56-202, Transcript of chromosome 1 open reading frame 56, humanhuman

TSL 3

Gene C1orf56, Length 433 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C1orf56-202ENST00000465135 HMGCRP04035 888 aa12.5□□□□□ -0.41
C1orf56-202ENST00000465135 ZKSCAN1P17029 563 aaPredicted RBP12.5□□□□□ -0.41
C1orf56-202ENST00000465135 ADORA2AP29274 412 aa12.5□□□□□ -0.41
C1orf56-202ENST00000465135 STAT3P40763 770 aa12.5□□□□□ -0.41
C1orf56-202ENST00000465135 RGS2P41220 211 aa12.5□□□□□ -0.41
C1orf56-202ENST00000465135 GRB14Q14449 540 aa12.5□□□□□ -0.41
C1orf56-202ENST00000465135 CCDC96Q2M329 555 aa12.5□□□□□ -0.41
C1orf56-202ENST00000465135 BMP2KLQ5H9B9 411 aa12.5□□□□□ -0.41
C1orf56-202ENST00000465135 SNRNP48Q6IEG0 339 aaKnown RBP12.5□□□□□ -0.41
C1orf56-202ENST00000465135 TTBK2Q6IQ55 1244 aa12.5□□□□□ -0.41
C1orf56-202ENST00000465135 PRPF38AQ8NAV1 312 aaKnown RBP12.5□□□□□ -0.41
C1orf56-202ENST00000465135 GMCL1Q96IK5 515 aa12.5□□□□□ -0.41
C1orf56-202ENST00000465135 ESYT1Q9BSJ8 1104 aa12.5□□□□□ -0.41
C1orf56-202ENST00000465135 RAVER2Q9HCJ3 691 aaKnown RBP12.5□□□□□ -0.41
C1orf56-202ENST00000465135 TCP11L1Q9NUJ3 509 aa12.5□□□□□ -0.41
C1orf56-202ENST00000465135 FEM1BQ9UK73 627 aa12.5□□□□□ -0.41
C1orf56-202ENST00000465135 SYNPO2Q9UMS6 1093 aa12.5□□□□□ -0.41
C1orf56-202ENST00000465135 RIPK3Q9Y572 518 aa12.5□□□□□ -0.41
C1orf56-202ENST00000465135 ZNF236Q9UL36 1845 aa12.5□□□□□ -0.41
C1orf56-202ENST00000465135 PLXNA1Q9UIW2 1896 aa12.5□□□□□ -0.41
C1orf56-202ENST00000465135 COBLO75128 1261 aa12.49□□□□□ -0.41
C1orf56-202ENST00000465135 PGK2P07205 417 aa12.49□□□□□ -0.41
C1orf56-202ENST00000465135 TOP1P11387 765 aaKnown RBP12.49□□□□□ -0.41
C1orf56-202ENST00000465135 PCP11498 1178 aaKnown RBP12.49□□□□□ -0.41
C1orf56-202ENST00000465135 XRCC5P13010 732 aaKnown RBP12.49□□□□□ -0.41
C1orf56-202ENST00000465135 PRKAR2AP13861 404 aaKnown RBP12.49□□□□□ -0.41
C1orf56-202ENST00000465135 SLC16A2P36021 539 aa12.49□□□□□ -0.41
C1orf56-202ENST00000465135 PPP4R3BQ5MIZ7 849 aa12.49□□□□□ -0.41
C1orf56-202ENST00000465135 STOX1Q6ZVD7 989 aa12.49□□□□□ -0.41
C1orf56-202ENST00000465135 CYB5R4Q7L1T6 521 aa12.49□□□□□ -0.41
C1orf56-202ENST00000465135 RIOX2Q8IUF8 465 aa12.49□□□□□ -0.41
C1orf56-202ENST00000465135 SHCBP1Q8NEM2 672 aa12.49□□□□□ -0.41
C1orf56-202ENST00000465135 LSG1Q9H089 658 aaKnown RBP12.49□□□□□ -0.41
C1orf56-202ENST00000465135 GPCPD1Q9NPB8 672 aa12.49□□□□□ -0.41
C1orf56-202ENST00000465135 ZSWIM5Q9P217 1185 aa12.49□□□□□ -0.41
C1orf56-202ENST00000465135 CTDP1Q9Y5B0 961 aaPredicted RBP12.49□□□□□ -0.41
C1orf56-202ENST00000465135 RBM8AQ9Y5S9 174 aaKnown RBP12.49□□□□□ -0.41
C1orf56-202ENST00000465135 U3KPZ7 1027 aaPredicted RBP12.49□□□□□ -0.41
C1orf56-202ENST00000465135 TNKSO95271 1327 aa12.48□□□□□ -0.41
C1orf56-202ENST00000465135 ZBED4O75132 1171 aa12.48□□□□□ -0.41
C1orf56-202ENST00000465135 STAT2P52630 851 aa12.48□□□□□ -0.41
C1orf56-202ENST00000465135 CACNB2Q08289 660 aaPredicted RBP12.48□□□□□ -0.41
C1orf56-202ENST00000465135 CCDC174Q6PII3 467 aa12.48□□□□□ -0.41
C1orf56-202ENST00000465135 ENAHQ8N8S7 591 aaPredicted RBP12.48□□□□□ -0.41
C1orf56-202ENST00000465135 U2AF1L4Q8WU68 220 aaKnown RBP12.48□□□□□ -0.41
C1orf56-202ENST00000465135 DCAF4Q8WV16 495 aa12.48□□□□□ -0.41
C1orf56-202ENST00000465135 MAP4K1Q92918 833 aa12.48□□□□□ -0.41
C1orf56-202ENST00000465135 DEFB118Q96PH6 123 aa12.48□□□□□ -0.41
C1orf56-202ENST00000465135 MMP19Q99542 508 aa12.48□□□□□ -0.41
C1orf56-202ENST00000465135 TEX13BQ9BXU2 312 aa12.48□□□□□ -0.41
C1orf56-202ENST00000465135 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.48□□□□□ -0.41
C1orf56-202ENST00000465135 MROH8Q9H579 483 aa12.48□□□□□ -0.41
C1orf56-202ENST00000465135 SLC38A10Q9HBR0 1119 aa12.48□□□□□ -0.41
C1orf56-202ENST00000465135 HOMER2Q9NSB8 354 aa12.48□□□□□ -0.41
C1orf56-202ENST00000465135 ZNF536O15090 1300 aa12.47□□□□□ -0.41
C1orf56-202ENST00000465135 E7EWF7 191 aa12.47□□□□□ -0.41
C1orf56-202ENST00000465135 SLC25A27O95847 323 aa12.47□□□□□ -0.41
C1orf56-202ENST00000465135 GJB1P08034 283 aa12.47□□□□□ -0.41
C1orf56-202ENST00000465135 GOLGA8HP0CJ92 632 aa12.47□□□□□ -0.41
C1orf56-202ENST00000465135 PDHBP11177 359 aa12.47□□□□□ -0.41
C1orf56-202ENST00000465135 CCND3P30281 292 aaPredicted RBP12.47□□□□□ -0.41
C1orf56-202ENST00000465135 CYP2C19P33261 490 aa12.47□□□□□ -0.41
C1orf56-202ENST00000465135 GJA8P48165 433 aa12.47□□□□□ -0.41
C1orf56-202ENST00000465135 COL9A3Q14050 684 aaPredicted RBP12.47□□□□□ -0.41
C1orf56-202ENST00000465135 CHST3Q7LGC8 479 aa12.47□□□□□ -0.41
C1orf56-202ENST00000465135 DPP9Q86TI2 863 aa12.47□□□□□ -0.41
C1orf56-202ENST00000465135 IQCA1Q86XH1 822 aa12.47□□□□□ -0.41
C1orf56-202ENST00000465135 AGBL1Q96MI9 1066 aa12.47□□□□□ -0.41
C1orf56-202ENST00000465135 ZSCAN10Q96SZ4 725 aaPredicted RBP12.47□□□□□ -0.41
C1orf56-202ENST00000465135 KRT23Q9C075 422 aa12.47□□□□□ -0.41
C1orf56-202ENST00000465135 CPVLQ9H3G5 476 aa12.47□□□□□ -0.41
C1orf56-202ENST00000465135 ANO2Q9NQ90 1003 aa12.47□□□□□ -0.41
C1orf56-202ENST00000465135 PAK6Q9NQU5 681 aaPredicted RBP12.47□□□□□ -0.41
C1orf56-202ENST00000465135 PRR12Q9ULL5 1215 aa12.47□□□□□ -0.41
C1orf56-202ENST00000465135 MCM3APO60318 1980 aa12.47□□□□□ -0.41
C1orf56-202ENST00000465135 RPTORQ8N122 1335 aa12.46□□□□□ -0.41
C1orf56-202ENST00000465135 STRNO43815 780 aa12.46□□□□□ -0.41
C1orf56-202ENST00000465135 HOXC6P09630 235 aa12.46□□□□□ -0.41
C1orf56-202ENST00000465135 FCER1AP12319 257 aa12.46□□□□□ -0.41
C1orf56-202ENST00000465135 MAP3K21Q5TCX8 1036 aa12.46□□□□□ -0.41
C1orf56-202ENST00000465135 KIAA1211Q6ZU35 1233 aa12.46□□□□□ -0.41
C1orf56-202ENST00000465135 FAM160B2Q86V87 743 aa12.46□□□□□ -0.41
C1orf56-202ENST00000465135 PNMA1Q8ND90 353 aa12.46□□□□□ -0.41
C1orf56-202ENST00000465135 CHURC1Q8WUH1 139 aa12.46□□□□□ -0.41
C1orf56-202ENST00000465135 TTC14Q96N46 770 aa12.46□□□□□ -0.41
C1orf56-202ENST00000465135 UBAC1Q9BSL1 405 aa12.46□□□□□ -0.41
C1orf56-202ENST00000465135 KAT14Q9H8E8 782 aa12.46□□□□□ -0.41
C1orf56-202ENST00000465135 CNNM2Q9H8M5 875 aa12.46□□□□□ -0.41
C1orf56-202ENST00000465135 SENP2Q9HC62 589 aa12.46□□□□□ -0.41
C1orf56-202ENST00000465135 PPP4R2Q9NY27 417 aa12.46□□□□□ -0.41
C1orf56-202ENST00000465135 FRMPD3Q5JV73 1810 aa12.46□□□□□ -0.42
C1orf56-202ENST00000465135 CEP290O15078 2479 aa12.46□□□□□ -0.42
C1orf56-202ENST00000465135 ATP2A1O14983 1001 aa12.45□□□□□ -0.42
C1orf56-202ENST00000465135 CDC45O75419 566 aa12.45□□□□□ -0.42
C1orf56-202ENST00000465135 SGPL1O95470 568 aa12.45□□□□□ -0.42
C1orf56-202ENST00000465135 TFRCP02786 760 aaKnown RBP12.45□□□□□ -0.42
C1orf56-202ENST00000465135 ZNF543Q08ER8 600 aa12.45□□□□□ -0.42
C1orf56-202ENST00000465135 KCTD2Q14681 263 aa12.45□□□□□ -0.42
C1orf56-202ENST00000465135 PRAMEF19Q5SWL8 479 aa12.45□□□□□ -0.42
C1orf56-202ENST00000465135 SYDE2Q5VT97 1194 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms