RNA–Protein interactions for RNA: ENST00000465036.1

UBR4-209, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2

Gene UBR4, Length 392 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-209ENST00000465036 IRAK3Q9Y616 596 aa7.8□□□□□ -1.16
UBR4-209ENST00000465036 ADAMTS20P59510 1910 aa7.8□□□□□ -1.16
UBR4-209ENST00000465036 FADS2P1A8MWK0 482 aa7.79□□□□□ -1.16
UBR4-209ENST00000465036 TLR3O15455 904 aaKnown RBP7.79□□□□□ -1.16
UBR4-209ENST00000465036 SYPP08247 313 aa7.79□□□□□ -1.16
UBR4-209ENST00000465036 GALK1P51570 392 aa7.79□□□□□ -1.16
UBR4-209ENST00000465036 RTP1P59025 263 aa7.79□□□□□ -1.16
UBR4-209ENST00000465036 OVOS1Q6IE37 1185 aa7.79□□□□□ -1.16
UBR4-209ENST00000465036 GALNT18Q6P9A2 607 aa7.79□□□□□ -1.16
UBR4-209ENST00000465036 SIRT2Q8IXJ6 389 aa7.79□□□□□ -1.16
UBR4-209ENST00000465036 ATG4CQ96DT6 458 aa7.79□□□□□ -1.16
UBR4-209ENST00000465036 CNTD2Q9H8S5 307 aa7.79□□□□□ -1.16
UBR4-209ENST00000465036 WTIPA6NIX2 430 aaPredicted RBP7.78□□□□□ -1.16
UBR4-209ENST00000465036 IRS4O14654 1257 aaPredicted RBP7.78□□□□□ -1.16
UBR4-209ENST00000465036 CLEC3AO75596 197 aa7.78□□□□□ -1.16
UBR4-209ENST00000465036 PRAMEF1O95521 474 aa7.78□□□□□ -1.16
UBR4-209ENST00000465036 VIPR1P32241 457 aa7.78□□□□□ -1.16
UBR4-209ENST00000465036 TAGLNQ01995 201 aaKnown RBP7.78□□□□□ -1.16
UBR4-209ENST00000465036 LAPTM5Q13571 262 aa7.78□□□□□ -1.16
UBR4-209ENST00000465036 SNW1Q13573 536 aaKnown RBP7.78□□□□□ -1.16
UBR4-209ENST00000465036 LRRFIP1Q32MZ4 808 aaKnown RBP7.78□□□□□ -1.16
UBR4-209ENST00000465036 NLRC3Q7RTR2 1065 aa7.78□□□□□ -1.16
UBR4-209ENST00000465036 PRDM14Q9GZV8 571 aa7.78□□□□□ -1.16
UBR4-209ENST00000465036 COPRSQ9NQ92 184 aa7.78□□□□□ -1.16
UBR4-209ENST00000465036 A0A0G2JLL6 359 aaPredicted RBP7.77□□□□□ -1.17
UBR4-209ENST00000465036 TRIM13O60858 407 aa7.77□□□□□ -1.17
UBR4-209ENST00000465036 AEBP1Q8IUX7 1158 aa7.77□□□□□ -1.17
UBR4-209ENST00000465036 ZNF296Q8WUU4 475 aaPredicted RBP7.77□□□□□ -1.17
UBR4-209ENST00000465036 RTEL1Q9NZ71 1219 aa7.77□□□□□ -1.17
UBR4-209ENST00000465036 MEIS3P2A8K0S8 358 aa7.76□□□□□ -1.17
UBR4-209ENST00000465036 TNFRSF10CO14798 259 aa7.76□□□□□ -1.17
UBR4-209ENST00000465036 MPOP05164 745 aa7.76□□□□□ -1.17
UBR4-209ENST00000465036 PI3P19957 117 aa7.76□□□□□ -1.17
UBR4-209ENST00000465036 BMP8BP34820 402 aa7.76□□□□□ -1.17
UBR4-209ENST00000465036 TMEM62Q0P6H9 643 aa7.76□□□□□ -1.17
UBR4-209ENST00000465036 PLCD4Q9BRC7 762 aa7.76□□□□□ -1.17
UBR4-209ENST00000465036 CHST7Q9NS84 486 aa7.76□□□□□ -1.17
UBR4-209ENST00000465036 A0A1W2PQ45 241 aaPredicted RBP7.75□□□□□ -1.17
UBR4-209ENST00000465036 A0A1W2PQY0 241 aa7.75□□□□□ -1.17
UBR4-209ENST00000465036 FOXD2O60548 495 aaPredicted RBP7.75□□□□□ -1.17
UBR4-209ENST00000465036 ZNF205O95201 554 aa7.75□□□□□ -1.17
UBR4-209ENST00000465036 POLR2BP30876 1174 aaKnown RBP7.75□□□□□ -1.17
UBR4-209ENST00000465036 ARL4AP40617 200 aa7.75□□□□□ -1.17
UBR4-209ENST00000465036 CRKP46108 304 aa7.75□□□□□ -1.17
UBR4-209ENST00000465036 HSF5Q4G112 596 aaPredicted RBP7.75□□□□□ -1.17
UBR4-209ENST00000465036 EPB41L4AQ9HCS5 686 aaPredicted RBP7.75□□□□□ -1.17
UBR4-209ENST00000465036 FKTNO75072 461 aa7.74□□□□□ -1.17
UBR4-209ENST00000465036 SASH1O94885 1247 aa7.74□□□□□ -1.17
UBR4-209ENST00000465036 NME1P15531 152 aaKnown RBP7.74□□□□□ -1.17
UBR4-209ENST00000465036 ZNF165P49910 485 aa7.74□□□□□ -1.17
UBR4-209ENST00000465036 AFF3P51826 1226 aaKnown RBP7.74□□□□□ -1.17
UBR4-209ENST00000465036 EPHB3P54753 998 aa7.74□□□□□ -1.17
UBR4-209ENST00000465036 NFIXQ14938 502 aa7.74□□□□□ -1.17
UBR4-209ENST00000465036 ZPBP2Q6X784 338 aa7.74□□□□□ -1.17
UBR4-209ENST00000465036 SLCO6A1Q86UG4 719 aa7.74□□□□□ -1.17
UBR4-209ENST00000465036 CXorf38Q8TB03 319 aa7.74□□□□□ -1.17
UBR4-209ENST00000465036 PANK1Q8TE04 598 aa7.74□□□□□ -1.17
UBR4-209ENST00000465036 MZB1Q8WU39 189 aa7.74□□□□□ -1.17
UBR4-209ENST00000465036 XYLT2Q9H1B5 865 aa7.74□□□□□ -1.17
UBR4-209ENST00000465036 ERVK13-1Q9NX77 482 aa7.74□□□□□ -1.17
UBR4-209ENST00000465036 KLHL14Q9P2G3 628 aa7.74□□□□□ -1.17
UBR4-209ENST00000465036 ACSL6Q9UKU0 697 aa7.74□□□□□ -1.17
UBR4-209ENST00000465036 TAF6LQ9Y6J9 622 aa7.74□□□□□ -1.17
UBR4-209ENST00000465036 CDR1P51861 262 aa7.73□□□□□ -1.17
UBR4-209ENST00000465036 CBX2Q14781 532 aaPredicted RBP7.73□□□□□ -1.17
UBR4-209ENST00000465036 INTS3Q68E01 1043 aaKnown RBP7.73□□□□□ -1.17
UBR4-209ENST00000465036 HS2ST1Q7LGA3 356 aa7.73□□□□□ -1.17
UBR4-209ENST00000465036 SLITRK4Q8IW52 837 aa7.73□□□□□ -1.17
UBR4-209ENST00000465036 ADAMTS1Q9UHI8 967 aa7.73□□□□□ -1.17
UBR4-209ENST00000465036 GPR55Q9Y2T6 319 aaPredicted RBP7.73□□□□□ -1.17
UBR4-209ENST00000465036 PCDHB12Q9Y5F1 795 aa7.73□□□□□ -1.17
UBR4-209ENST00000465036 PDIA4P13667 645 aaKnown RBP7.72□□□□□ -1.17
UBR4-209ENST00000465036 SYN1P17600 705 aa7.72□□□□□ -1.17
UBR4-209ENST00000465036 CEBPAP49715 358 aaPredicted RBP7.72□□□□□ -1.17
UBR4-209ENST00000465036 CAP1Q01518 475 aa7.72□□□□□ -1.17
UBR4-209ENST00000465036 CLCQ05315 142 aa7.72□□□□□ -1.17
UBR4-209ENST00000465036 TMEM192Q8IY95 271 aa7.72□□□□□ -1.17
UBR4-209ENST00000465036 TMEFF1Q8IYR6 380 aa7.72□□□□□ -1.17
UBR4-209ENST00000465036 NT5C1AQ9BXI3 368 aa7.72□□□□□ -1.17
UBR4-209ENST00000465036 VAV1P15498 845 aa7.71□□□□□ -1.18
UBR4-209ENST00000465036 CTSKP43235 329 aa7.71□□□□□ -1.18
UBR4-209ENST00000465036 APOBRQ0VD83 1088 aa7.71□□□□□ -1.18
UBR4-209ENST00000465036 AUHQ13825 339 aaKnown RBP7.71□□□□□ -1.18
UBR4-209ENST00000465036 MRPL58Q14197 206 aaKnown RBP7.71□□□□□ -1.18
UBR4-209ENST00000465036 SEZ6Q53EL9 994 aa7.71□□□□□ -1.18
UBR4-209ENST00000465036 LDHDQ86WU2 507 aa7.71□□□□□ -1.18
UBR4-209ENST00000465036 FAM129CQ86XR2 697 aa7.71□□□□□ -1.18
UBR4-209ENST00000465036 TNFRSF12AQ9NP84 129 aa7.71□□□□□ -1.18
UBR4-209ENST00000465036 UBP1Q9NZI7 540 aa7.71□□□□□ -1.18
UBR4-209ENST00000465036 GGT7Q9UJ14 662 aa7.71□□□□□ -1.18
UBR4-209ENST00000465036 GSNP06396 782 aa7.7□□□□□ -1.18
UBR4-209ENST00000465036 SDHBP21912 280 aa7.7□□□□□ -1.18
UBR4-209ENST00000465036 CYP4F8P98187 520 aa7.7□□□□□ -1.18
UBR4-209ENST00000465036 CCDC27Q2M243 656 aa7.7□□□□□ -1.18
UBR4-209ENST00000465036 CNKSR3Q6P9H4 555 aa7.7□□□□□ -1.18
UBR4-209ENST00000465036 GK5Q6ZS86 529 aa7.7□□□□□ -1.18
UBR4-209ENST00000465036 IGDCC3Q8IVU1 814 aa7.7□□□□□ -1.18
UBR4-209ENST00000465036 SP8Q8IXZ3 490 aa7.7□□□□□ -1.18
UBR4-209ENST00000465036 ZNF512BQ96KM6 892 aaPredicted RBP7.7□□□□□ -1.18
UBR4-209ENST00000465036 DHRS1Q96LJ7 313 aa7.7□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms