RNA–Protein interactions for RNA: ENST00000463622.6

SCFD1-204, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 1,943 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-204ENST00000463622 WIPI1Q5MNZ9 446 aaPredicted RBP5.19□□□□□ -1.58
SCFD1-204ENST00000463622 CBLL1Q75N03 491 aa5.19□□□□□ -1.58
SCFD1-204ENST00000463622 PRDM11Q9NQV5 511 aa5.19□□□□□ -1.58
SCFD1-204ENST00000463622 YTHDC2Q9H6S0 1430 aaKnown RBP5.19□□□□□ -1.58
SCFD1-204ENST00000463622 CNTNAP4Q9C0A0 1308 aa5.18□□□□□ -1.58
SCFD1-204ENST00000463622 CEACAM5P06731 702 aa5.18□□□□□ -1.58
SCFD1-204ENST00000463622 DNAJC14Q6Y2X3 702 aaPredicted RBP5.18□□□□□ -1.58
SCFD1-204ENST00000463622 SPATA31E1Q6ZUB1 1445 aa5.18□□□□□ -1.58
SCFD1-204ENST00000463622 ARMCX6Q7L4S7 300 aa5.18□□□□□ -1.58
SCFD1-204ENST00000463622 CYFIP1Q7L576 1253 aa5.18□□□□□ -1.58
SCFD1-204ENST00000463622 NPAS4Q8IUM7 802 aa5.18□□□□□ -1.58
SCFD1-204ENST00000463622 AGBL5Q8NDL9 886 aa5.18□□□□□ -1.58
SCFD1-204ENST00000463622 FRMD6Q96NE9 622 aa5.18□□□□□ -1.58
SCFD1-204ENST00000463622 PRAM1Q96QH2 718 aa5.18□□□□□ -1.58
SCFD1-204ENST00000463622 SYT17Q9BSW7 474 aa5.18□□□□□ -1.58
SCFD1-204ENST00000463622 NWD2Q9ULI1 1742 aa5.18□□□□□ -1.58
SCFD1-204ENST00000463622 ANKARQ7Z5J8 1434 aa5.17□□□□□ -1.58
SCFD1-204ENST00000463622 EOMESO95936 686 aa5.17□□□□□ -1.58
SCFD1-204ENST00000463622 ETF1P62495 437 aaKnown RBP5.17□□□□□ -1.58
SCFD1-204ENST00000463622 IFI16Q16666 785 aaKnown RBP5.17□□□□□ -1.58
SCFD1-204ENST00000463622 ZNF792Q3KQV3 632 aa5.17□□□□□ -1.58
SCFD1-204ENST00000463622 HDXQ7Z353 690 aa5.17□□□□□ -1.58
SCFD1-204ENST00000463622 TCP11L2Q8N4U5 519 aa5.17□□□□□ -1.58
SCFD1-204ENST00000463622 RIN3Q8TB24 985 aa5.17□□□□□ -1.58
SCFD1-204ENST00000463622 ZNF507Q8TCN5 953 aa5.17□□□□□ -1.58
SCFD1-204ENST00000463622 XAGE3Q8WTP9 111 aa5.17□□□□□ -1.58
SCFD1-204ENST00000463622 PDGFDQ9GZP0 370 aaPredicted RBP5.17□□□□□ -1.58
SCFD1-204ENST00000463622 PRDM7Q9NQW5 492 aa5.17□□□□□ -1.58
SCFD1-204ENST00000463622 ADAMTS6Q9UKP5 1117 aa5.17□□□□□ -1.58
SCFD1-204ENST00000463622 TLR6Q9Y2C9 796 aa5.17□□□□□ -1.58
SCFD1-204ENST00000463622 THRAP3Q9Y2W1 955 aaKnown RBP5.17□□□□□ -1.58
SCFD1-204ENST00000463622 GPRASP1Q5JY77 1395 aa5.17□□□□□ -1.58
SCFD1-204ENST00000463622 PRR36Q9H6K5 1346 aa5.17□□□□□ -1.58
SCFD1-204ENST00000463622 THSD7AQ9UPZ6 1657 aa5.17□□□□□ -1.58
SCFD1-204ENST00000463622 PIK3C2GO75747 1445 aa5.17□□□□□ -1.58
SCFD1-204ENST00000463622 PRKCQQ04759 706 aa5.17□□□□□ -1.58
SCFD1-204ENST00000463622 PSMD2Q13200 908 aa5.17□□□□□ -1.58
SCFD1-204ENST00000463622 SLBPQ14493 270 aaKnown RBP eCLIP5.17□□□□□ -1.58
SCFD1-204ENST00000463622 CHRNA2Q15822 529 aa5.17□□□□□ -1.58
SCFD1-204ENST00000463622 STK11IPQ8N1F8 1099 aa5.17□□□□□ -1.58
SCFD1-204ENST00000463622 JARID2Q92833 1246 aaPredicted RBP5.17□□□□□ -1.58
SCFD1-204ENST00000463622 KIAA0232Q92628 1395 aa5.17□□□□□ -1.58
SCFD1-204ENST00000463622 CEP350Q5VT06 3117 aa5.16□□□□□ -1.58
SCFD1-204ENST00000463622 PRR33A8MZF0 331 aa5.16□□□□□ -1.58
SCFD1-204ENST00000463622 SLITRK5O94991 958 aa5.16□□□□□ -1.58
SCFD1-204ENST00000463622 CTSHP09668 335 aa5.16□□□□□ -1.58
SCFD1-204ENST00000463622 LMNB1P20700 586 aa5.16□□□□□ -1.58
SCFD1-204ENST00000463622 LIG3P49916 1009 aa5.16□□□□□ -1.58
SCFD1-204ENST00000463622 EVA1CP58658 441 aa5.16□□□□□ -1.58
SCFD1-204ENST00000463622 HRASLS5Q96KN8 279 aa5.16□□□□□ -1.58
SCFD1-204ENST00000463622 FMNL2Q96PY5 1086 aa5.16□□□□□ -1.58
SCFD1-204ENST00000463622 WNT10AQ9GZT5 417 aa5.16□□□□□ -1.58
SCFD1-204ENST00000463622 VAV3Q9UKW4 847 aa5.16□□□□□ -1.58
SCFD1-204ENST00000463622 KIF1AQ12756 1690 aa5.16□□□□□ -1.58
SCFD1-204ENST00000463622 TMEM265A0A087WTH1 108 aa5.15□□□□□ -1.58
SCFD1-204ENST00000463622 ZBTB7AO95365 584 aa5.15□□□□□ -1.58
SCFD1-204ENST00000463622 TFE3P19532 575 aaPredicted RBP5.15□□□□□ -1.58
SCFD1-204ENST00000463622 GRK4P32298 578 aa5.15□□□□□ -1.58
SCFD1-204ENST00000463622 ZC3H6P61129 1189 aaKnown RBP5.15□□□□□ -1.58
SCFD1-204ENST00000463622 SAFB2Q14151 953 aaKnown RBP eCLIP5.15□□□□□ -1.58
SCFD1-204ENST00000463622 NKPD1Q17RQ9 610 aa5.15□□□□□ -1.58
SCFD1-204ENST00000463622 PTF1AQ7RTS3 328 aa5.15□□□□□ -1.58
SCFD1-204ENST00000463622 KRTAP19-1Q8IUB9 90 aa5.15□□□□□ -1.58
SCFD1-204ENST00000463622 MISP3Q96FF7 219 aa5.15□□□□□ -1.58
SCFD1-204ENST00000463622 MIPEPQ99797 713 aa5.15□□□□□ -1.58
SCFD1-204ENST00000463622 DPH2Q9BQC3 489 aaPredicted RBP5.15□□□□□ -1.58
SCFD1-204ENST00000463622 GZF1Q9H116 711 aaPredicted RBP5.15□□□□□ -1.58
SCFD1-204ENST00000463622 MBNL3Q9NUK0 354 aaKnown RBP5.15□□□□□ -1.58
SCFD1-204ENST00000463622 USP35Q9P2H5 1018 aa5.15□□□□□ -1.58
SCFD1-204ENST00000463622 UTRNP46939 3433 aa5.15□□□□□ -1.58
SCFD1-204ENST00000463622 RGPD1P0DJD0 1748 aa5.15□□□□□ -1.58
SCFD1-204ENST00000463622 LRIG2O94898 1065 aa5.15□□□□□ -1.59
SCFD1-204ENST00000463622 RNASE1P07998 156 aaKnown RBP5.15□□□□□ -1.59
SCFD1-204ENST00000463622 FUT4P22083 530 aa5.15□□□□□ -1.59
SCFD1-204ENST00000463622 DAB2P98082 770 aa5.15□□□□□ -1.59
SCFD1-204ENST00000463622 AGMOQ6ZNB7 445 aa5.15□□□□□ -1.59
SCFD1-204ENST00000463622 KRTAP1-3Q8IUG1 177 aa5.15□□□□□ -1.59
SCFD1-204ENST00000463622 SPACA3Q8IXA5 215 aa5.15□□□□□ -1.59
SCFD1-204ENST00000463622 KCT2Q8NC54 265 aa5.15□□□□□ -1.59
SCFD1-204ENST00000463622 NGDNQ8NEJ9 315 aaKnown RBP5.15□□□□□ -1.59
SCFD1-204ENST00000463622 FOXQ1Q9C009 403 aa5.15□□□□□ -1.59
SCFD1-204ENST00000463622 RC3H2Q9HBD1 1191 aaKnown RBP5.15□□□□□ -1.59
SCFD1-204ENST00000463622 MKNK2Q9HBH9 465 aa5.15□□□□□ -1.59
SCFD1-204ENST00000463622 POGKQ9P215 609 aa5.15□□□□□ -1.59
SCFD1-204ENST00000463622 GTF2IRD1Q9UHL9 959 aa5.15□□□□□ -1.59
SCFD1-204ENST00000463622 TPX2Q9ULW0 747 aaKnown RBP5.15□□□□□ -1.59
SCFD1-204ENST00000463622 NRAPQ86VF7 1730 aa5.15□□□□□ -1.59
SCFD1-204ENST00000463622 FMN2Q9NZ56 1722 aa5.15□□□□□ -1.59
SCFD1-204ENST00000463622 PLCH1Q4KWH8 1693 aa5.14□□□□□ -1.59
SCFD1-204ENST00000463622 ADGRB2O60241 1585 aa5.14□□□□□ -1.59
SCFD1-204ENST00000463622 CPDO75976 1380 aa5.14□□□□□ -1.59
SCFD1-204ENST00000463622 TNS1Q9HBL0 1735 aaKnown RBP5.14□□□□□ -1.59
SCFD1-204ENST00000463622 GFRA2O00451 464 aa5.14□□□□□ -1.59
SCFD1-204ENST00000463622 CDKAL1Q5VV42 579 aa5.14□□□□□ -1.59
SCFD1-204ENST00000463622 PRAMEF13Q5VWM6 474 aa5.14□□□□□ -1.59
SCFD1-204ENST00000463622 SCARA3Q6AZY7 606 aa5.14□□□□□ -1.59
SCFD1-204ENST00000463622 PI4K2BQ8TCG2 481 aa5.14□□□□□ -1.59
SCFD1-204ENST00000463622 MTFR1LQ9H019 292 aa5.14□□□□□ -1.59
SCFD1-204ENST00000463622 TNKS2Q9H2K2 1166 aa5.14□□□□□ -1.59
SCFD1-204ENST00000463622 GOLGA2P5Q9HBQ8 144 aa5.14□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 67.8 ms