RNA–Protein interactions for RNA: ENST00000463526.1

CMSS1-202, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

TSL 3

Gene CMSS1, Length 397 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-202ENST00000463526 ZNFX1Q9P2E3 1918 aaKnown RBP18.3■□□□□ 0.52
CMSS1-202ENST00000463526 A0A1W2PQ45 241 aaPredicted RBP18.3■□□□□ 0.52
CMSS1-202ENST00000463526 A0A1W2PQY0 241 aa18.3■□□□□ 0.52
CMSS1-202ENST00000463526 GPAA1O43292 621 aa18.3■□□□□ 0.52
CMSS1-202ENST00000463526 ZBED4O75132 1171 aa18.3■□□□□ 0.52
CMSS1-202ENST00000463526 ITGB8P26012 769 aa18.3■□□□□ 0.52
CMSS1-202ENST00000463526 KIFC2Q96AC6 838 aa18.3■□□□□ 0.52
CMSS1-202ENST00000463526 CHMP4CQ96CF2 233 aa18.3■□□□□ 0.52
CMSS1-202ENST00000463526 GPATCH3Q96I76 525 aa18.3■□□□□ 0.52
CMSS1-202ENST00000463526 RAVER2Q9HCJ3 691 aaKnown RBP18.3■□□□□ 0.52
CMSS1-202ENST00000463526 EPB41L4AQ9HCS5 686 aaPredicted RBP18.3■□□□□ 0.52
CMSS1-202ENST00000463526 TACC3Q9Y6A5 838 aa18.3■□□□□ 0.52
CMSS1-202ENST00000463526 COL11A1P12107 1806 aaPredicted RBP18.29■□□□□ 0.52
CMSS1-202ENST00000463526 M0R2C6 588 aa18.29■□□□□ 0.52
CMSS1-202ENST00000463526 SNAI1O95863 264 aaPredicted RBP18.29■□□□□ 0.52
CMSS1-202ENST00000463526 CLTBP09497 229 aa18.29■□□□□ 0.52
CMSS1-202ENST00000463526 C1orf53Q5VUE5 145 aa18.29■□□□□ 0.52
CMSS1-202ENST00000463526 GIMAP6Q6P9H5 292 aa18.29■□□□□ 0.52
CMSS1-202ENST00000463526 LRRC47Q8N1G4 583 aaKnown RBP18.29■□□□□ 0.52
CMSS1-202ENST00000463526 PRPF38AQ8NAV1 312 aaKnown RBP18.29■□□□□ 0.52
CMSS1-202ENST00000463526 FAM184BQ9ULE4 1060 aa18.29■□□□□ 0.52
CMSS1-202ENST00000463526 ISY1Q9ULR0 285 aaKnown RBP18.29■□□□□ 0.52
CMSS1-202ENST00000463526 RAG1P15918 1043 aa18.28■□□□□ 0.52
CMSS1-202ENST00000463526 CDX2Q99626 313 aaPredicted RBP18.28■□□□□ 0.52
CMSS1-202ENST00000463526 SEMA6BQ9H3T3 888 aa18.28■□□□□ 0.52
CMSS1-202ENST00000463526 DCTPP1Q9H773 170 aa18.28■□□□□ 0.52
CMSS1-202ENST00000463526 STARD7Q9NQZ5 370 aa18.28■□□□□ 0.52
CMSS1-202ENST00000463526 TMEM39AQ9NV64 488 aa18.28■□□□□ 0.52
CMSS1-202ENST00000463526 ADAMTS4O75173 837 aa18.27■□□□□ 0.52
CMSS1-202ENST00000463526 EPHB4P54760 987 aa18.27■□□□□ 0.52
CMSS1-202ENST00000463526 IRX5P78411 483 aaPredicted RBP18.27■□□□□ 0.52
CMSS1-202ENST00000463526 PHF6Q8IWS0 365 aaKnown RBP eCLIP18.27■□□□□ 0.52
CMSS1-202ENST00000463526 ANKRD35Q8N283 1001 aa18.27■□□□□ 0.52
CMSS1-202ENST00000463526 CEP95Q96GE4 821 aa18.27■□□□□ 0.52
CMSS1-202ENST00000463526 SEC62Q99442 399 aaKnown RBP18.27■□□□□ 0.52
CMSS1-202ENST00000463526 PARP14Q460N5 1801 aa18.27■□□□□ 0.52
CMSS1-202ENST00000463526 MYH7P12883 1935 aa18.27■□□□□ 0.51
CMSS1-202ENST00000463526 CUL9Q8IWT3 2517 aa18.26■□□□□ 0.51
CMSS1-202ENST00000463526 SYNRGQ9UMZ2 1314 aa18.26■□□□□ 0.51
CMSS1-202ENST00000463526 LTBP2Q14767 1821 aa18.26■□□□□ 0.51
CMSS1-202ENST00000463526 IGKV6D-41A0A0C4DH26 115 aa18.26■□□□□ 0.51
CMSS1-202ENST00000463526 MYADML2A6NDP7 307 aa18.26■□□□□ 0.51
CMSS1-202ENST00000463526 PATL2C9JE40 543 aaKnown RBP18.26■□□□□ 0.51
CMSS1-202ENST00000463526 ZFYP08048 801 aaPredicted RBP18.26■□□□□ 0.51
CMSS1-202ENST00000463526 GNAT2P19087 354 aa18.26■□□□□ 0.51
CMSS1-202ENST00000463526 ACLYP53396 1101 aa18.26■□□□□ 0.51
CMSS1-202ENST00000463526 KCNA10Q16322 511 aa18.26■□□□□ 0.51
CMSS1-202ENST00000463526 IFNL3Q8IZI9 196 aa18.26■□□□□ 0.51
CMSS1-202ENST00000463526 VTI1AQ96AJ9 217 aa18.26■□□□□ 0.51
CMSS1-202ENST00000463526 RNPC3Q96LT9 517 aaKnown RBP18.26■□□□□ 0.51
CMSS1-202ENST00000463526 ZNF287Q9HBT7 754 aa18.26■□□□□ 0.51
CMSS1-202ENST00000463526 HOMER2Q9NSB8 354 aa18.26■□□□□ 0.51
CMSS1-202ENST00000463526 MTMR4Q9NYA4 1195 aa18.26■□□□□ 0.51
CMSS1-202ENST00000463526 LAMA2P24043 3122 aaKnown RBP18.26■□□□□ 0.51
CMSS1-202ENST00000463526 ROBO3Q96MS0 1386 aa18.26■□□□□ 0.51
CMSS1-202ENST00000463526 SYNGAP1Q96PV0 1343 aa18.25■□□□□ 0.51
CMSS1-202ENST00000463526 DNAJC25-GNG10A0A024R161 153 aa18.25■□□□□ 0.51
CMSS1-202ENST00000463526 DCDC2CA8MYV0 355 aa18.25■□□□□ 0.51
CMSS1-202ENST00000463526 KIAA0355O15063 1070 aa18.25■□□□□ 0.51
CMSS1-202ENST00000463526 SMAD3P84022 425 aaKnown RBP18.25■□□□□ 0.51
CMSS1-202ENST00000463526 ACVR2BQ13705 512 aa18.25■□□□□ 0.51
CMSS1-202ENST00000463526 SLFN13Q68D06 897 aa18.25■□□□□ 0.51
CMSS1-202ENST00000463526 MSL3Q8N5Y2 521 aaKnown RBP18.25■□□□□ 0.51
CMSS1-202ENST00000463526 NUP133Q8WUM0 1156 aa18.25■□□□□ 0.51
CMSS1-202ENST00000463526 MYLIPQ8WY64 445 aa18.25■□□□□ 0.51
CMSS1-202ENST00000463526 TSEN34Q9BSV6 310 aaKnown RBP18.25■□□□□ 0.51
CMSS1-202ENST00000463526 COL25A1Q9BXS0 654 aaPredicted RBP18.25■□□□□ 0.51
CMSS1-202ENST00000463526 TTYH1Q9H313 450 aaPredicted RBP18.25■□□□□ 0.51
CMSS1-202ENST00000463526 SLC38A10Q9HBR0 1119 aa18.25■□□□□ 0.51
CMSS1-202ENST00000463526 CDKN2AIPQ9NXV6 580 aaPredicted RBP18.25■□□□□ 0.51
CMSS1-202ENST00000463526 FEM1BQ9UK73 627 aa18.25■□□□□ 0.51
CMSS1-202ENST00000463526 TTLL1O95922 423 aa18.24■□□□□ 0.51
CMSS1-202ENST00000463526 C6orf222P0C671 652 aaPredicted RBP18.24■□□□□ 0.51
CMSS1-202ENST00000463526 TSPY3P0CV98 308 aa18.24■□□□□ 0.51
CMSS1-202ENST00000463526 TSPY8P0CW00 308 aa18.24■□□□□ 0.51
CMSS1-202ENST00000463526 FPGSQ05932 587 aa18.24■□□□□ 0.51
CMSS1-202ENST00000463526 FAAP100Q0VG06 881 aa18.24■□□□□ 0.51
CMSS1-202ENST00000463526 MAMDC4Q6UXC1 1216 aa18.24■□□□□ 0.51
CMSS1-202ENST00000463526 KLHDC9Q8NEP7 349 aa18.24■□□□□ 0.51
CMSS1-202ENST00000463526 MKL1Q969V6 931 aa18.24■□□□□ 0.51
CMSS1-202ENST00000463526 PLXNA1Q9UIW2 1896 aa18.23■□□□□ 0.51
CMSS1-202ENST00000463526 TMEM232C9JQI7 657 aa18.23■□□□□ 0.51
CMSS1-202ENST00000463526 ATP2A1O14983 1001 aa18.23■□□□□ 0.51
CMSS1-202ENST00000463526 DUSP11O75319 330 aaKnown RBP18.23■□□□□ 0.51
CMSS1-202ENST00000463526 BMP3P12645 472 aa18.23■□□□□ 0.51
CMSS1-202ENST00000463526 TFAP4Q01664 338 aa18.23■□□□□ 0.51
CMSS1-202ENST00000463526 IKQ13123 557 aaPredicted RBP18.23■□□□□ 0.51
CMSS1-202ENST00000463526 MAFAQ8NHW3 353 aaPredicted RBP18.23■□□□□ 0.51
CMSS1-202ENST00000463526 OTUD7AQ8TE49 926 aaPredicted RBP18.23■□□□□ 0.51
CMSS1-202ENST00000463526 FSD1Q9BTV5 496 aa18.23■□□□□ 0.51
CMSS1-202ENST00000463526 NACAP1Q9BZK3 213 aa18.23■□□□□ 0.51
CMSS1-202ENST00000463526 NAPBQ9H115 298 aa18.23■□□□□ 0.51
CMSS1-202ENST00000463526 MOXD2PA6NHM9 499 aa18.22■□□□□ 0.51
CMSS1-202ENST00000463526 ADCY6O43306 1168 aa18.22■□□□□ 0.51
CMSS1-202ENST00000463526 CNTN2Q02246 1040 aa18.22■□□□□ 0.51
CMSS1-202ENST00000463526 PDE4BQ07343 736 aa18.22■□□□□ 0.51
CMSS1-202ENST00000463526 LRRFIP1Q32MZ4 808 aaKnown RBP18.22■□□□□ 0.51
CMSS1-202ENST00000463526 CCDC144BQ3MJ40 725 aa18.22■□□□□ 0.51
CMSS1-202ENST00000463526 CCSAPQ6IQ19 270 aaPredicted RBP18.22■□□□□ 0.51
CMSS1-202ENST00000463526 ARMCX2Q7L311 632 aa18.22■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 71.6 ms