RNA–Protein interactions for RNA: ENST00000463511.1

SSNA1-203, Transcript of SS nuclear autoantigen 1, humanhuman

TSL 2

Gene SSNA1, Length 570 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSNA1-203ENST00000463511 MKNK2Q9HBH9 465 aa27.73■■■□□ 2.03
SSNA1-203ENST00000463511 A0A1W2PQ45 241 aaPredicted RBP27.72■■■□□ 2.03
SSNA1-203ENST00000463511 A0A1W2PQY0 241 aa27.72■■■□□ 2.03
SSNA1-203ENST00000463511 NDUFB10O96000 172 aa27.72■■■□□ 2.03
SSNA1-203ENST00000463511 AKR1A1P14550 325 aa27.72■■■□□ 2.03
SSNA1-203ENST00000463511 KBTBD3Q8NAB2 608 aa27.72■■■□□ 2.03
SSNA1-203ENST00000463511 TEX13BQ9BXU2 312 aa27.72■■■□□ 2.03
SSNA1-203ENST00000463511 DCTPP1Q9H773 170 aa27.72■■■□□ 2.03
SSNA1-203ENST00000463511 NYAP2Q9P242 653 aa27.72■■■□□ 2.03
SSNA1-203ENST00000463511 CNPY2Q9Y2B0 182 aa27.72■■■□□ 2.03
SSNA1-203ENST00000463511 F5H6K3 240 aa27.71■■■□□ 2.03
SSNA1-203ENST00000463511 KLRC3Q07444 240 aa27.71■■■□□ 2.03
SSNA1-203ENST00000463511 TSHZ3Q63HK5 1081 aa27.71■■■□□ 2.03
SSNA1-203ENST00000463511 OSBP2Q969R2 916 aa27.71■■■□□ 2.03
SSNA1-203ENST00000463511 RIPK3Q9Y572 518 aa27.71■■■□□ 2.03
SSNA1-203ENST00000463511 PQBP1O60828 265 aaKnown RBP27.7■■■□□ 2.02
SSNA1-203ENST00000463511 CLTBP09497 229 aa27.7■■■□□ 2.02
SSNA1-203ENST00000463511 ITGB8P26012 769 aa27.7■■■□□ 2.02
SSNA1-203ENST00000463511 GIMAP6Q6P9H5 292 aa27.7■■■□□ 2.02
SSNA1-203ENST00000463511 APPBP2Q92624 585 aa27.7■■■□□ 2.02
SSNA1-203ENST00000463511 EPB41L4AQ9HCS5 686 aaPredicted RBP27.7■■■□□ 2.02
SSNA1-203ENST00000463511 TACC3Q9Y6A5 838 aa27.7■■■□□ 2.02
SSNA1-203ENST00000463511 ADAMTS4O75173 837 aa27.69■■■□□ 2.02
SSNA1-203ENST00000463511 SLC4A3P48751 1232 aa27.69■■■□□ 2.02
SSNA1-203ENST00000463511 HDAC1Q13547 482 aaPredicted RBP27.69■■■□□ 2.02
SSNA1-203ENST00000463511 PHF6Q8IWS0 365 aaKnown RBP eCLIP27.69■■■□□ 2.02
SSNA1-203ENST00000463511 SYNRGQ9UMZ2 1314 aa27.68■■■□□ 2.02
SSNA1-203ENST00000463511 GPAA1O43292 621 aa27.68■■■□□ 2.02
SSNA1-203ENST00000463511 CPXCR1Q8N123 301 aa27.68■■■□□ 2.02
SSNA1-203ENST00000463511 PRPF38AQ8NAV1 312 aaKnown RBP27.68■■■□□ 2.02
SSNA1-203ENST00000463511 DDX11Q96FC9 970 aa27.68■■■□□ 2.02
SSNA1-203ENST00000463511 GPATCH3Q96I76 525 aa27.68■■■□□ 2.02
SSNA1-203ENST00000463511 CLIP2Q9UDT6 1046 aa27.68■■■□□ 2.02
SSNA1-203ENST00000463511 SYNGAP1Q96PV0 1343 aa27.67■■■□□ 2.02
SSNA1-203ENST00000463511 RNF113AO15541 343 aaKnown RBP27.67■■■□□ 2.02
SSNA1-203ENST00000463511 PRDM1O75626 825 aa27.67■■■□□ 2.02
SSNA1-203ENST00000463511 SNAI1O95863 264 aaPredicted RBP27.67■■■□□ 2.02
SSNA1-203ENST00000463511 TDO2P48775 406 aa27.67■■■□□ 2.02
SSNA1-203ENST00000463511 MSL3Q8N5Y2 521 aaKnown RBP27.67■■■□□ 2.02
SSNA1-203ENST00000463511 CDX2Q99626 313 aaPredicted RBP27.67■■■□□ 2.02
SSNA1-203ENST00000463511 ZHX1Q9UKY1 873 aaPredicted RBP27.67■■■□□ 2.02
SSNA1-203ENST00000463511 PRUNE2Q8WUY3 3088 aa27.66■■■□□ 2.02
SSNA1-203ENST00000463511 DNAJC25-GNG10A0A024R161 153 aa27.66■■■□□ 2.02
SSNA1-203ENST00000463511 IGKV6D-41A0A0C4DH26 115 aa27.66■■■□□ 2.02
SSNA1-203ENST00000463511 M0R2C6 588 aa27.66■■■□□ 2.02
SSNA1-203ENST00000463511 SMAD3P84022 425 aaKnown RBP27.66■■■□□ 2.02
SSNA1-203ENST00000463511 KIFC2Q96AC6 838 aa27.66■■■□□ 2.02
SSNA1-203ENST00000463511 CEP95Q96GE4 821 aa27.66■■■□□ 2.02
SSNA1-203ENST00000463511 SEMA6BQ9H3T3 888 aa27.66■■■□□ 2.02
SSNA1-203ENST00000463511 CTDP1Q9Y5B0 961 aaPredicted RBP27.66■■■□□ 2.02
SSNA1-203ENST00000463511 VCANP13611 3396 aa27.65■■■□□ 2.02
SSNA1-203ENST00000463511 KIAA0355O15063 1070 aa27.65■■■□□ 2.02
SSNA1-203ENST00000463511 ZBED4O75132 1171 aa27.65■■■□□ 2.02
SSNA1-203ENST00000463511 APPP05067 770 aa27.65■■■□□ 2.02
SSNA1-203ENST00000463511 RAG1P15918 1043 aa27.65■■■□□ 2.02
SSNA1-203ENST00000463511 ACLYP53396 1101 aa27.65■■■□□ 2.02
SSNA1-203ENST00000463511 EPHB4P54760 987 aa27.65■■■□□ 2.02
SSNA1-203ENST00000463511 MAMDC4Q6UXC1 1216 aa27.65■■■□□ 2.02
SSNA1-203ENST00000463511 TSEN34Q9BSV6 310 aaKnown RBP27.65■■■□□ 2.02
SSNA1-203ENST00000463511 COL25A1Q9BXS0 654 aaPredicted RBP27.65■■■□□ 2.02
SSNA1-203ENST00000463511 RAVER2Q9HCJ3 691 aaKnown RBP27.65■■■□□ 2.02
SSNA1-203ENST00000463511 STARD7Q9NQZ5 370 aa27.65■■■□□ 2.02
SSNA1-203ENST00000463511 FAM184BQ9ULE4 1060 aa27.65■■■□□ 2.02
SSNA1-203ENST00000463511 ATP2A1O14983 1001 aa27.64■■■□□ 2.02
SSNA1-203ENST00000463511 IGHDP01880 384 aa27.64■■■□□ 2.02
SSNA1-203ENST00000463511 ZNF444Q8N0Y2 327 aaPredicted RBP27.64■■■□□ 2.02
SSNA1-203ENST00000463511 LRRC47Q8N1G4 583 aaKnown RBP27.64■■■□□ 2.02
SSNA1-203ENST00000463511 RNPC3Q96LT9 517 aaKnown RBP27.64■■■□□ 2.02
SSNA1-203ENST00000463511 TTYH1Q9H313 450 aaPredicted RBP27.64■■■□□ 2.02
SSNA1-203ENST00000463511 TMEM39AQ9NV64 488 aa27.64■■■□□ 2.02
SSNA1-203ENST00000463511 MYADML2A6NDP7 307 aa27.63■■■□□ 2.01
SSNA1-203ENST00000463511 ZFYP08048 801 aaPredicted RBP27.63■■■□□ 2.01
SSNA1-203ENST00000463511 GNAT2P19087 354 aa27.63■■■□□ 2.01
SSNA1-203ENST00000463511 NUP133Q8WUM0 1156 aa27.63■■■□□ 2.01
SSNA1-203ENST00000463511 RWDD1Q9H446 243 aaPredicted RBP27.63■■■□□ 2.01
SSNA1-203ENST00000463511 SLC38A10Q9HBR0 1119 aa27.63■■■□□ 2.01
SSNA1-203ENST00000463511 ZNF287Q9HBT7 754 aa27.63■■■□□ 2.01
SSNA1-203ENST00000463511 MTMR4Q9NYA4 1195 aa27.63■■■□□ 2.01
SSNA1-203ENST00000463511 LRRC37A2A6NM11 1700 aa27.63■■■□□ 2.01
SSNA1-203ENST00000463511 FPGSQ05932 587 aa27.62■■■□□ 2.01
SSNA1-203ENST00000463511 FAAP100Q0VG06 881 aa27.62■■■□□ 2.01
SSNA1-203ENST00000463511 KCNA10Q16322 511 aa27.62■■■□□ 2.01
SSNA1-203ENST00000463511 ANKRD33Q7Z3H0 272 aa27.62■■■□□ 2.01
SSNA1-203ENST00000463511 ZNF467Q7Z7K2 595 aaPredicted RBP27.62■■■□□ 2.01
SSNA1-203ENST00000463511 ANKRD35Q8N283 1001 aa27.62■■■□□ 2.01
SSNA1-203ENST00000463511 KLHDC9Q8NEP7 349 aa27.62■■■□□ 2.01
SSNA1-203ENST00000463511 PLIN4Q96Q06 1357 aa27.61■■■□□ 2.01
SSNA1-203ENST00000463511 DCDC2CA8MYV0 355 aa27.61■■■□□ 2.01
SSNA1-203ENST00000463511 ADCY6O43306 1168 aa27.61■■■□□ 2.01
SSNA1-203ENST00000463511 TTLL1O95922 423 aa27.61■■■□□ 2.01
SSNA1-203ENST00000463511 IRX5P78411 483 aaPredicted RBP27.61■■■□□ 2.01
SSNA1-203ENST00000463511 MAFAQ8NHW3 353 aaPredicted RBP27.61■■■□□ 2.01
SSNA1-203ENST00000463511 MYLIPQ8WY64 445 aa27.61■■■□□ 2.01
SSNA1-203ENST00000463511 MKL1Q969V6 931 aa27.61■■■□□ 2.01
SSNA1-203ENST00000463511 FGD4Q96M96 766 aa27.61■■■□□ 2.01
SSNA1-203ENST00000463511 CDKN2AIPQ9NXV6 580 aaPredicted RBP27.61■■■□□ 2.01
SSNA1-203ENST00000463511 FEM1BQ9UK73 627 aa27.61■■■□□ 2.01
SSNA1-203ENST00000463511 MOXD2PA6NHM9 499 aa27.6■■■□□ 2.01
SSNA1-203ENST00000463511 DUSP11O75319 330 aaKnown RBP27.6■■■□□ 2.01
SSNA1-203ENST00000463511 ACVR2BQ13705 512 aa27.6■■■□□ 2.01
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms