RNA–Protein interactions for RNA: ENST00000463060.5

COL6A1-202, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 5

Gene COL6A1, Length 863 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-202ENST00000463060 FAM160B2Q86V87 743 aa16.64■□□□□ 0.25
COL6A1-202ENST00000463060 RASAL3Q86YV0 1011 aa16.64■□□□□ 0.25
COL6A1-202ENST00000463060 CHURC1Q8WUH1 139 aa16.64■□□□□ 0.25
COL6A1-202ENST00000463060 DDX11Q96FC9 970 aa16.64■□□□□ 0.25
COL6A1-202ENST00000463060 SLC26A6Q9BXS9 759 aa16.64■□□□□ 0.25
COL6A1-202ENST00000463060 RPAP3Q9H6T3 665 aaPredicted RBP16.64■□□□□ 0.25
COL6A1-202ENST00000463060 FBXO28Q9NVF7 368 aa16.64■□□□□ 0.25
COL6A1-202ENST00000463060 TMOD4Q9NZQ9 345 aa16.64■□□□□ 0.25
COL6A1-202ENST00000463060 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.64■□□□□ 0.25
COL6A1-202ENST00000463060 DAXXQ9UER7 740 aaPredicted RBP16.64■□□□□ 0.25
COL6A1-202ENST00000463060 TESPA1A2RU30 521 aaPredicted RBP16.63■□□□□ 0.25
COL6A1-202ENST00000463060 FAM155AB1AL88 458 aaPredicted RBP16.63■□□□□ 0.25
COL6A1-202ENST00000463060 STAT2P52630 851 aa16.63■□□□□ 0.25
COL6A1-202ENST00000463060 TREML2Q5T2D2 321 aa16.63■□□□□ 0.25
COL6A1-202ENST00000463060 SYDE2Q5VT97 1194 aa16.63■□□□□ 0.25
COL6A1-202ENST00000463060 AIFM3Q96NN9 605 aa16.63■□□□□ 0.25
COL6A1-202ENST00000463060 PRR12Q9ULL5 1215 aa16.63■□□□□ 0.25
COL6A1-202ENST00000463060 ADAMTS5Q9UNA0 930 aa16.63■□□□□ 0.25
COL6A1-202ENST00000463060 PARP14Q460N5 1801 aa16.62■□□□□ 0.25
COL6A1-202ENST00000463060 hCG_1642624A0A1W2PR95 340 aa16.62■□□□□ 0.25
COL6A1-202ENST00000463060 USP17L15C9J2P7 530 aa16.62■□□□□ 0.25
COL6A1-202ENST00000463060 USP17L13C9JLJ4 530 aa16.62■□□□□ 0.25
COL6A1-202ENST00000463060 USP17L11C9JVI0 530 aa16.62■□□□□ 0.25
COL6A1-202ENST00000463060 USP17L18D6R9N7 530 aa16.62■□□□□ 0.25
COL6A1-202ENST00000463060 USP17L22D6RA61 530 aa16.62■□□□□ 0.25
COL6A1-202ENST00000463060 USP17L17D6RBQ6 530 aa16.62■□□□□ 0.25
COL6A1-202ENST00000463060 USP17L19D6RCP7 530 aa16.62■□□□□ 0.25
COL6A1-202ENST00000463060 USP17L20D6RJB6 530 aa16.62■□□□□ 0.25
COL6A1-202ENST00000463060 DEXIO95424 95 aa16.62■□□□□ 0.25
COL6A1-202ENST00000463060 SLC10A3P09131 477 aa16.62■□□□□ 0.25
COL6A1-202ENST00000463060 HSPA6P17066 643 aa16.62■□□□□ 0.25
COL6A1-202ENST00000463060 ZNF157P51786 506 aaPredicted RBP16.62■□□□□ 0.25
COL6A1-202ENST00000463060 GTF2A2P52657 109 aa16.62■□□□□ 0.25
COL6A1-202ENST00000463060 USP17L24Q0WX57 530 aa16.62■□□□□ 0.25
COL6A1-202ENST00000463060 PFKFB3Q16875 520 aaPredicted RBP16.62■□□□□ 0.25
COL6A1-202ENST00000463060 FASTKD5Q7L8L6 764 aaKnown RBP16.62■□□□□ 0.25
COL6A1-202ENST00000463060 TRIM22Q8IYM9 498 aa16.62■□□□□ 0.25
COL6A1-202ENST00000463060 PRPF38AQ8NAV1 312 aaKnown RBP16.62■□□□□ 0.25
COL6A1-202ENST00000463060 RGS22Q8NE09 1264 aa16.62■□□□□ 0.25
COL6A1-202ENST00000463060 SHISA4Q96DD7 197 aa16.62■□□□□ 0.25
COL6A1-202ENST00000463060 PIGSQ96S52 555 aa16.62■□□□□ 0.25
COL6A1-202ENST00000463060 VAT1LQ9HCJ6 419 aa16.62■□□□□ 0.25
COL6A1-202ENST00000463060 RBM27Q9P2N5 1060 aaKnown RBP16.62■□□□□ 0.25
COL6A1-202ENST00000463060 AGTPBP1Q9UPW5 1226 aa16.62■□□□□ 0.25
COL6A1-202ENST00000463060 PNMA6FA0A0J9YX94 578 aa16.61■□□□□ 0.25
COL6A1-202ENST00000463060 PPP1R11O60927 126 aaPredicted RBP16.61■□□□□ 0.25
COL6A1-202ENST00000463060 CETPP11597 493 aa16.61■□□□□ 0.25
COL6A1-202ENST00000463060 DSG3P32926 999 aa16.61■□□□□ 0.25
COL6A1-202ENST00000463060 APLP1P51693 650 aa16.61■□□□□ 0.25
COL6A1-202ENST00000463060 POTEEQ6S8J3 1075 aa16.61■□□□□ 0.25
COL6A1-202ENST00000463060 BRI3BPQ8WY22 251 aa16.61■□□□□ 0.25
COL6A1-202ENST00000463060 RRP36Q96EU6 259 aaKnown RBP16.61■□□□□ 0.25
COL6A1-202ENST00000463060 CREBZFQ9NS37 354 aa16.61■□□□□ 0.25
COL6A1-202ENST00000463060 PPP1R9AQ9ULJ8 1098 aa16.61■□□□□ 0.25
COL6A1-202ENST00000463060 ZBTB5O15062 677 aa16.6■□□□□ 0.25
COL6A1-202ENST00000463060 SCG2P13521 617 aa16.6■□□□□ 0.25
COL6A1-202ENST00000463060 SYT1P21579 422 aa16.6■□□□□ 0.25
COL6A1-202ENST00000463060 COG2Q14746 738 aa16.6■□□□□ 0.25
COL6A1-202ENST00000463060 GADL1Q6ZQY3 521 aa16.6■□□□□ 0.25
COL6A1-202ENST00000463060 WASF1Q92558 559 aa16.6■□□□□ 0.25
COL6A1-202ENST00000463060 CCDC102AQ96A19 550 aa16.6■□□□□ 0.25
COL6A1-202ENST00000463060 SLF1Q9BQI6 1058 aa16.6■□□□□ 0.25
COL6A1-202ENST00000463060 ALG1Q9BT22 464 aa16.6■□□□□ 0.25
COL6A1-202ENST00000463060 TANGO6Q9C0B7 1094 aa16.6■□□□□ 0.25
COL6A1-202ENST00000463060 RANBP17Q9H2T7 1088 aaKnown RBP16.6■□□□□ 0.25
COL6A1-202ENST00000463060 MYPNQ86TC9 1320 aa16.6■□□□□ 0.25
COL6A1-202ENST00000463060 MYH6P13533 1939 aa16.6■□□□□ 0.25
COL6A1-202ENST00000463060 RASSF10A6NK89 507 aa16.59■□□□□ 0.25
COL6A1-202ENST00000463060 FDX1P10109 184 aa16.59■□□□□ 0.25
COL6A1-202ENST00000463060 AKAP17AQ02040 695 aaKnown RBP16.59■□□□□ 0.25
COL6A1-202ENST00000463060 QRICH1Q2TAL8 776 aa16.59■□□□□ 0.25
COL6A1-202ENST00000463060 LARP1BQ659C4 914 aaKnown RBP16.59■□□□□ 0.25
COL6A1-202ENST00000463060 LBX2Q6XYB7 198 aa16.59■□□□□ 0.25
COL6A1-202ENST00000463060 FAM184AQ8NB25 1140 aa16.59■□□□□ 0.25
COL6A1-202ENST00000463060 REPS2Q8NFH8 660 aa16.59■□□□□ 0.25
COL6A1-202ENST00000463060 FBXO18Q8NFZ0 1043 aa16.59■□□□□ 0.25
COL6A1-202ENST00000463060 KIFC2Q96AC6 838 aa16.59■□□□□ 0.25
COL6A1-202ENST00000463060 PTPN18Q99952 460 aa16.59■□□□□ 0.25
COL6A1-202ENST00000463060 SLC38A10Q9HBR0 1119 aa16.59■□□□□ 0.25
COL6A1-202ENST00000463060 GJB4Q9NTQ9 266 aa16.59■□□□□ 0.25
COL6A1-202ENST00000463060 HOXC10Q9NYD6 342 aa16.59■□□□□ 0.25
COL6A1-202ENST00000463060 ABT1Q9ULW3 272 aaKnown RBP16.59■□□□□ 0.25
COL6A1-202ENST00000463060 SLC45A1Q9Y2W3 748 aa16.59■□□□□ 0.25
COL6A1-202ENST00000463060 ZDHHC9Q9Y397 364 aa16.59■□□□□ 0.25
COL6A1-202ENST00000463060 CCL15-CCL14A0A0B4J2E2 113 aa16.58■□□□□ 0.24
COL6A1-202ENST00000463060 BTBD19C9JJ37 291 aa16.58■□□□□ 0.24
COL6A1-202ENST00000463060 STXBP3O00186 592 aa16.58■□□□□ 0.24
COL6A1-202ENST00000463060 VWA5AO00534 786 aa16.58■□□□□ 0.24
COL6A1-202ENST00000463060 FLOT1O75955 427 aa16.58■□□□□ 0.24
COL6A1-202ENST00000463060 PDCP20941 246 aa16.58■□□□□ 0.24
COL6A1-202ENST00000463060 SNAP25P60880 206 aa16.58■□□□□ 0.24
COL6A1-202ENST00000463060 IKQ13123 557 aaPredicted RBP16.58■□□□□ 0.24
COL6A1-202ENST00000463060 CCL15Q16663 113 aa16.58■□□□□ 0.24
COL6A1-202ENST00000463060 WWC2Q6AWC2 1192 aa16.58■□□□□ 0.24
COL6A1-202ENST00000463060 TYW1BQ6NUM6 668 aa16.58■□□□□ 0.24
COL6A1-202ENST00000463060 ANKRD23Q86SG2 305 aa16.58■□□□□ 0.24
COL6A1-202ENST00000463060 FAM177A1Q8N128 213 aaPredicted RBP16.58■□□□□ 0.24
COL6A1-202ENST00000463060 PIBF1Q8WXW3 757 aa16.58■□□□□ 0.24
COL6A1-202ENST00000463060 P2RX7Q99572 595 aaKnown RBP16.58■□□□□ 0.24
COL6A1-202ENST00000463060 SH3GLB2Q9NR46 395 aa16.58■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms