RNA–Protein interactions for RNA: ENST00000462668.5

SMC4-203, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 4,235 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-203ENST00000462668 SYT9Q86SS6 491 aa3.94□□□□□ -1.78
SMC4-203ENST00000462668 PTPRHQ9HD43 1115 aa3.94□□□□□ -1.78
SMC4-203ENST00000462668 PPP2R3BQ9Y5P8 575 aa3.94□□□□□ -1.78
SMC4-203ENST00000462668 FHOD1Q9Y613 1164 aa3.94□□□□□ -1.78
SMC4-203ENST00000462668 GHRHP01286 108 aa3.94□□□□□ -1.78
SMC4-203ENST00000462668 AKAP5P24588 427 aa3.94□□□□□ -1.78
SMC4-203ENST00000462668 POLR2BP30876 1174 aaKnown RBP3.94□□□□□ -1.78
SMC4-203ENST00000462668 ADCYAP1R1P41586 468 aa3.94□□□□□ -1.78
SMC4-203ENST00000462668 KLF1Q13351 362 aaPredicted RBP3.94□□□□□ -1.78
SMC4-203ENST00000462668 RAPGEF1Q13905 1077 aa3.94□□□□□ -1.78
SMC4-203ENST00000462668 NBPF12Q5TAG4 269 aaPredicted RBP3.94□□□□□ -1.78
SMC4-203ENST00000462668 CDAN1Q8IWY9 1227 aa3.94□□□□□ -1.78
SMC4-203ENST00000462668 NPLOC4Q8TAT6 608 aa3.94□□□□□ -1.78
SMC4-203ENST00000462668 COPS5Q92905 334 aa3.94□□□□□ -1.78
SMC4-203ENST00000462668 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP3.94□□□□□ -1.78
SMC4-203ENST00000462668 FBRSQ9HAH7 460 aa3.94□□□□□ -1.78
SMC4-203ENST00000462668 ANLNQ9NQW6 1124 aa3.94□□□□□ -1.78
SMC4-203ENST00000462668 GJD2Q9UKL4 321 aa3.94□□□□□ -1.78
SMC4-203ENST00000462668 TBX3O15119 743 aa3.93□□□□□ -1.78
SMC4-203ENST00000462668 TMPRSS2O15393 492 aa3.93□□□□□ -1.78
SMC4-203ENST00000462668 FAM163BP0C2L3 166 aa3.93□□□□□ -1.78
SMC4-203ENST00000462668 PLCG1P19174 1290 aa3.93□□□□□ -1.78
SMC4-203ENST00000462668 LMNB1P20700 586 aa3.93□□□□□ -1.78
SMC4-203ENST00000462668 CD247P20963 164 aa3.93□□□□□ -1.78
SMC4-203ENST00000462668 ITKQ08881 620 aa3.93□□□□□ -1.78
SMC4-203ENST00000462668 PI4K2BQ8TCG2 481 aa3.93□□□□□ -1.78
SMC4-203ENST00000462668 RNF166Q96A37 237 aaPredicted RBP3.93□□□□□ -1.78
SMC4-203ENST00000462668 EXOC5O00471 708 aa3.93□□□□□ -1.78
SMC4-203ENST00000462668 TGM5O43548 720 aa3.93□□□□□ -1.78
SMC4-203ENST00000462668 DLGAP3O95886 979 aa3.93□□□□□ -1.78
SMC4-203ENST00000462668 CST3P01034 146 aaPredicted RBP3.93□□□□□ -1.78
SMC4-203ENST00000462668 YARSP54577 528 aaKnown RBP3.93□□□□□ -1.78
SMC4-203ENST00000462668 USP14P54578 494 aa3.93□□□□□ -1.78
SMC4-203ENST00000462668 CTBSQ01459 385 aa3.93□□□□□ -1.78
SMC4-203ENST00000462668 PTSQ03393 145 aa3.93□□□□□ -1.78
SMC4-203ENST00000462668 C19orf57Q0VDD7 668 aa3.93□□□□□ -1.78
SMC4-203ENST00000462668 MOGSQ13724 837 aa3.93□□□□□ -1.78
SMC4-203ENST00000462668 OVCH1Q7RTY7 1134 aa3.93□□□□□ -1.78
SMC4-203ENST00000462668 ZBTB46Q86UZ6 589 aa3.93□□□□□ -1.78
SMC4-203ENST00000462668 PUM2Q8TB72 1066 aaKnown RBP eCLIP3.93□□□□□ -1.78
SMC4-203ENST00000462668 CYP26B1Q9NR63 512 aa3.93□□□□□ -1.78
SMC4-203ENST00000462668 CFAP69A5D8W1 941 aa3.93□□□□□ -1.78
SMC4-203ENST00000462668 ASGR2P07307 311 aa3.93□□□□□ -1.78
SMC4-203ENST00000462668 SLC5A1P13866 664 aa3.93□□□□□ -1.78
SMC4-203ENST00000462668 VCAM1P19320 739 aa3.93□□□□□ -1.78
SMC4-203ENST00000462668 CYP2C19P33261 490 aa3.93□□□□□ -1.78
SMC4-203ENST00000462668 ZRSR2Q15696 482 aaKnown RBP3.93□□□□□ -1.78
SMC4-203ENST00000462668 EFCAB2Q5VUJ9 269 aa3.93□□□□□ -1.78
SMC4-203ENST00000462668 CNNM4Q6P4Q7 775 aa3.93□□□□□ -1.78
SMC4-203ENST00000462668 HFE2Q6ZVN8 426 aa3.93□□□□□ -1.78
SMC4-203ENST00000462668 TMPRSS13Q9BYE2 586 aa3.93□□□□□ -1.78
SMC4-203ENST00000462668 LUC7LQ9NQ29 371 aaKnown RBP3.93□□□□□ -1.78
SMC4-203ENST00000462668 SH2B1Q9NRF2 756 aaPredicted RBP3.93□□□□□ -1.78
SMC4-203ENST00000462668 ANAPC4Q9UJX5 808 aa3.93□□□□□ -1.78
SMC4-203ENST00000462668 GIT1Q9Y2X7 761 aa3.93□□□□□ -1.78
SMC4-203ENST00000462668 A6NNZ2 444 aa3.92□□□□□ -1.78
SMC4-203ENST00000462668 PGRP06401 933 aa3.92□□□□□ -1.78
SMC4-203ENST00000462668 SV2CQ496J9 727 aa3.92□□□□□ -1.78
SMC4-203ENST00000462668 HABP4Q5JVS0 413 aaKnown RBP3.92□□□□□ -1.78
SMC4-203ENST00000462668 CCDC155Q8N6L0 562 aa3.92□□□□□ -1.78
SMC4-203ENST00000462668 COG1Q8WTW3 980 aa3.92□□□□□ -1.78
SMC4-203ENST00000462668 CDIP1Q9H305 208 aa3.92□□□□□ -1.78
SMC4-203ENST00000462668 HMGB1P1B2RPK0 211 aaPredicted RBP3.92□□□□□ -1.78
SMC4-203ENST00000462668 OS9Q13438 667 aaPredicted RBP3.92□□□□□ -1.78
SMC4-203ENST00000462668 POU4F3Q15319 338 aa3.92□□□□□ -1.78
SMC4-203ENST00000462668 GPAT2Q6NUI2 795 aa3.92□□□□□ -1.78
SMC4-203ENST00000462668 RAB44Q7Z6P3 723 aaPredicted RBP3.92□□□□□ -1.78
SMC4-203ENST00000462668 C7orf61Q8IZ16 206 aa3.92□□□□□ -1.78
SMC4-203ENST00000462668 CYB5D2Q8WUJ1 264 aa3.92□□□□□ -1.78
SMC4-203ENST00000462668 ZFP42Q96MM3 310 aa3.92□□□□□ -1.78
SMC4-203ENST00000462668 GP6Q9HCN6 339 aa3.92□□□□□ -1.78
SMC4-203ENST00000462668 AOC2O75106 756 aa3.92□□□□□ -1.78
SMC4-203ENST00000462668 IL17REQ8NFR9 667 aa3.92□□□□□ -1.78
SMC4-203ENST00000462668 OR2W6PQ8NHA6 318 aa3.92□□□□□ -1.78
SMC4-203ENST00000462668 USP33Q8TEY7 942 aa3.92□□□□□ -1.78
SMC4-203ENST00000462668 LEO1Q8WVC0 666 aaPredicted RBP3.92□□□□□ -1.78
SMC4-203ENST00000462668 SLC7A3Q8WY07 619 aa3.92□□□□□ -1.78
SMC4-203ENST00000462668 TRERF1Q96PN7 1200 aa3.92□□□□□ -1.78
SMC4-203ENST00000462668 ELAC2Q9BQ52 826 aaKnown RBP3.92□□□□□ -1.78
SMC4-203ENST00000462668 SMG9Q9H0W8 520 aaKnown RBP3.92□□□□□ -1.78
SMC4-203ENST00000462668 USP25Q9UHP3 1055 aa3.92□□□□□ -1.78
SMC4-203ENST00000462668 DIS3Q9Y2L1 958 aaKnown RBP3.92□□□□□ -1.78
SMC4-203ENST00000462668 M0R2C6 588 aa3.91□□□□□ -1.78
SMC4-203ENST00000462668 ULK1O75385 1050 aa3.91□□□□□ -1.78
SMC4-203ENST00000462668 NEFMP07197 916 aa3.91□□□□□ -1.78
SMC4-203ENST00000462668 MAN1A1P33908 653 aa3.91□□□□□ -1.78
SMC4-203ENST00000462668 RECQLP46063 649 aaPredicted RBP3.91□□□□□ -1.78
SMC4-203ENST00000462668 MLLT1Q03111 559 aaPredicted RBP3.91□□□□□ -1.78
SMC4-203ENST00000462668 STRN3Q13033 797 aa3.91□□□□□ -1.78
SMC4-203ENST00000462668 SIM2Q14190 667 aaPredicted RBP3.91□□□□□ -1.78
SMC4-203ENST00000462668 HSF5Q4G112 596 aaPredicted RBP3.91□□□□□ -1.78
SMC4-203ENST00000462668 RNF214Q8ND24 703 aa3.91□□□□□ -1.78
SMC4-203ENST00000462668 PNMA2Q9UL42 364 aa3.91□□□□□ -1.78
SMC4-203ENST00000462668 GLRX3O76003 335 aaKnown RBP3.91□□□□□ -1.78
SMC4-203ENST00000462668 SCARF1Q14162 830 aa3.91□□□□□ -1.78
SMC4-203ENST00000462668 SAPCD2Q86UD0 394 aa3.91□□□□□ -1.78
SMC4-203ENST00000462668 MORC1Q86VD1 984 aa3.91□□□□□ -1.78
SMC4-203ENST00000462668 FCHSD1Q86WN1 690 aa3.91□□□□□ -1.78
SMC4-203ENST00000462668 HID1Q8IV36 788 aa3.91□□□□□ -1.78
SMC4-203ENST00000462668 TMEM145Q8NBT3 493 aa3.91□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms