RNA–Protein interactions for RNA: ENST00000462438.1

RAE1-207, Transcript of ribonucleic acid export 1, humanhuman

TSL 2

Gene RAE1, Length 3,251 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAE1-207ENST00000462438 PDCP20941 246 aa13.95□□□□□ -0.18
RAE1-207ENST00000462438 PRRT2Q7Z6L0 340 aaPredicted RBP13.95□□□□□ -0.18
RAE1-207ENST00000462438 GTPBP4Q9BZE4 634 aaKnown RBP13.95□□□□□ -0.18
RAE1-207ENST00000462438 CCDC83Q8IWF9 413 aa13.94□□□□□ -0.18
RAE1-207ENST00000462438 ZCCHC17Q9NP64 241 aaKnown RBP13.94□□□□□ -0.18
RAE1-207ENST00000462438 SH3GLB2Q9NR46 395 aa13.94□□□□□ -0.18
RAE1-207ENST00000462438 FEM1BQ9UK73 627 aa13.94□□□□□ -0.18
RAE1-207ENST00000462438 TRAF1Q13077 416 aa13.94□□□□□ -0.18
RAE1-207ENST00000462438 SHROOM1Q2M3G4 852 aaPredicted RBP13.94□□□□□ -0.18
RAE1-207ENST00000462438 PRAMEF18Q5VWM3 479 aa13.94□□□□□ -0.18
RAE1-207ENST00000462438 SCAF8Q9UPN6 1271 aaKnown RBP13.94□□□□□ -0.18
RAE1-207ENST00000462438 LOC102724159A0A0B4J2E5 919 aa13.93□□□□□ -0.18
RAE1-207ENST00000462438 DEXIO95424 95 aa13.93□□□□□ -0.18
RAE1-207ENST00000462438 BMP3P12645 472 aa13.93□□□□□ -0.18
RAE1-207ENST00000462438 PWP2Q15269 919 aaKnown RBP13.93□□□□□ -0.18
RAE1-207ENST00000462438 PPP1R18Q6NYC8 613 aa13.93□□□□□ -0.18
RAE1-207ENST00000462438 ZKSCAN4Q969J2 545 aaPredicted RBP13.93□□□□□ -0.18
RAE1-207ENST00000462438 DYNC1I1O14576 645 aa13.93□□□□□ -0.18
RAE1-207ENST00000462438 CPLX1O14810 134 aa13.93□□□□□ -0.18
RAE1-207ENST00000462438 TRIM22Q8IYM9 498 aa13.93□□□□□ -0.18
RAE1-207ENST00000462438 LRRC47Q8N1G4 583 aaKnown RBP13.93□□□□□ -0.18
RAE1-207ENST00000462438 ACER1Q8TDN7 264 aa13.93□□□□□ -0.18
RAE1-207ENST00000462438 SMC3Q9UQE7 1217 aa13.93□□□□□ -0.18
RAE1-207ENST00000462438 PTPDC1A2A3K4 754 aa13.93□□□□□ -0.18
RAE1-207ENST00000462438 CST9Q5W186 159 aa13.93□□□□□ -0.18
RAE1-207ENST00000462438 LBX2Q6XYB7 198 aa13.93□□□□□ -0.18
RAE1-207ENST00000462438 CHURC1Q8WUH1 139 aa13.93□□□□□ -0.18
RAE1-207ENST00000462438 TLL2Q9Y6L7 1015 aa13.93□□□□□ -0.18
RAE1-207ENST00000462438 MYH15Q9Y2K3 1946 aa13.92□□□□□ -0.18
RAE1-207ENST00000462438 TESPA1A2RU30 521 aaPredicted RBP13.92□□□□□ -0.18
RAE1-207ENST00000462438 TRAF5O00463 557 aa13.92□□□□□ -0.18
RAE1-207ENST00000462438 CELF2O95319 508 aaKnown RBP13.92□□□□□ -0.18
RAE1-207ENST00000462438 HOXA7P31268 230 aaPredicted RBP13.92□□□□□ -0.18
RAE1-207ENST00000462438 SSRP1Q08945 709 aaKnown RBP13.92□□□□□ -0.18
RAE1-207ENST00000462438 TPRNQ4KMQ1 711 aa13.92□□□□□ -0.18
RAE1-207ENST00000462438 NECAB1Q8N987 351 aa13.92□□□□□ -0.18
RAE1-207ENST00000462438 IRF6O14896 467 aa13.92□□□□□ -0.18
RAE1-207ENST00000462438 SLC1A4P43007 532 aa13.92□□□□□ -0.18
RAE1-207ENST00000462438 TNNT3P45378 269 aaPredicted RBP13.92□□□□□ -0.18
RAE1-207ENST00000462438 SRBD1Q8N5C6 995 aaKnown RBP13.92□□□□□ -0.18
RAE1-207ENST00000462438 EMILIN3Q9NT22 766 aa13.92□□□□□ -0.18
RAE1-207ENST00000462438 KLRF2D3W0D1 207 aa13.91□□□□□ -0.18
RAE1-207ENST00000462438 ADD1P35611 737 aaKnown RBP13.91□□□□□ -0.18
RAE1-207ENST00000462438 ECE1P42892 770 aa13.91□□□□□ -0.18
RAE1-207ENST00000462438 C17orf53Q8N3J3 647 aaPredicted RBP13.91□□□□□ -0.18
RAE1-207ENST00000462438 GTF3C2Q8WUA4 911 aaPredicted RBP13.91□□□□□ -0.18
RAE1-207ENST00000462438 NUP133Q8WUM0 1156 aa13.91□□□□□ -0.18
RAE1-207ENST00000462438 ADAMTS5Q9UNA0 930 aa13.91□□□□□ -0.18
RAE1-207ENST00000462438 FDPSP14324 419 aaKnown RBP13.91□□□□□ -0.18
RAE1-207ENST00000462438 FASTKD5Q7L8L6 764 aaKnown RBP13.91□□□□□ -0.18
RAE1-207ENST00000462438 CLEC10AQ8IUN9 316 aa13.91□□□□□ -0.18
RAE1-207ENST00000462438 WNK4Q96J92 1243 aa13.91□□□□□ -0.18
RAE1-207ENST00000462438 MYL10Q9BUA6 226 aa13.91□□□□□ -0.18
RAE1-207ENST00000462438 ZHX2Q9Y6X8 837 aa13.91□□□□□ -0.18
RAE1-207ENST00000462438 SRCAPQ6ZRS2 3230 aa13.91□□□□□ -0.18
RAE1-207ENST00000462438 ESYT2A0FGR8 921 aa13.91□□□□□ -0.18
RAE1-207ENST00000462438 CCT2P78371 535 aaKnown RBP13.91□□□□□ -0.18
RAE1-207ENST00000462438 PFKFB3Q16875 520 aaPredicted RBP13.91□□□□□ -0.18
RAE1-207ENST00000462438 GALNT17Q6IS24 598 aa13.91□□□□□ -0.18
RAE1-207ENST00000462438 SAMD3Q8N6K7 520 aa13.91□□□□□ -0.18
RAE1-207ENST00000462438 NCOA5Q9HCD5 579 aaKnown RBP13.91□□□□□ -0.18
RAE1-207ENST00000462438 YY1P25490 414 aa13.9□□□□□ -0.18
RAE1-207ENST00000462438 OAZ1P54368 228 aa13.9□□□□□ -0.18
RAE1-207ENST00000462438 MTERF4Q7Z6M4 381 aaKnown RBP13.9□□□□□ -0.18
RAE1-207ENST00000462438 ZNF784Q8NCA9 323 aaPredicted RBP13.9□□□□□ -0.18
RAE1-207ENST00000462438 RANBP17Q9H2T7 1088 aaKnown RBP13.9□□□□□ -0.18
RAE1-207ENST00000462438 TMOD4Q9NZQ9 345 aa13.9□□□□□ -0.18
RAE1-207ENST00000462438 ATP2A1O14983 1001 aa13.9□□□□□ -0.18
RAE1-207ENST00000462438 PTMAP06454 111 aaKnown RBP13.9□□□□□ -0.18
RAE1-207ENST00000462438 GJB2P29033 226 aa13.9□□□□□ -0.18
RAE1-207ENST00000462438 FAM193AP78312 1265 aa13.9□□□□□ -0.18
RAE1-207ENST00000462438 NUCB2P80303 420 aa13.9□□□□□ -0.18
RAE1-207ENST00000462438 STK3Q13188 491 aa13.9□□□□□ -0.18
RAE1-207ENST00000462438 MOGSQ13724 837 aa13.9□□□□□ -0.18
RAE1-207ENST00000462438 FEZ1Q99689 392 aa13.9□□□□□ -0.18
RAE1-207ENST00000462438 PLEKHA8P1O95397 391 aa13.89□□□□□ -0.19
RAE1-207ENST00000462438 CHRM1P11229 460 aaPredicted RBP13.89□□□□□ -0.19
RAE1-207ENST00000462438 VCAM1P19320 739 aa13.89□□□□□ -0.19
RAE1-207ENST00000462438 STAT2P52630 851 aa13.89□□□□□ -0.19
RAE1-207ENST00000462438 GTF2A2P52657 109 aa13.89□□□□□ -0.19
RAE1-207ENST00000462438 SPP2Q13103 211 aa13.89□□□□□ -0.19
RAE1-207ENST00000462438 PABPC4Q13310 644 aaKnown RBP eCLIP13.89□□□□□ -0.196e-7■■■■■ 133.1
RAE1-207ENST00000462438 SNAPC2Q13487 334 aa13.89□□□□□ -0.19
RAE1-207ENST00000462438 MTMR2Q13614 643 aa13.89□□□□□ -0.19
RAE1-207ENST00000462438 SLC35G1Q2M3R5 365 aa13.89□□□□□ -0.19
RAE1-207ENST00000462438 NOL8Q76FK4 1167 aaKnown RBP13.89□□□□□ -0.19
RAE1-207ENST00000462438 REM2Q8IYK8 340 aaPredicted RBP13.89□□□□□ -0.19
RAE1-207ENST00000462438 STAG2Q8N3U4 1231 aa13.89□□□□□ -0.19
RAE1-207ENST00000462438 SLC10A4Q96EP9 437 aa13.89□□□□□ -0.19
RAE1-207ENST00000462438 CYTH3O43739 400 aa13.89□□□□□ -0.19
RAE1-207ENST00000462438 TTLL12Q14166 644 aaPredicted RBP13.89□□□□□ -0.19
RAE1-207ENST00000462438 PKN1Q16512 942 aa13.89□□□□□ -0.19
RAE1-207ENST00000462438 KIAA1755Q5JYT7 1200 aa13.89□□□□□ -0.19
RAE1-207ENST00000462438 SYDE2Q5VT97 1194 aa13.89□□□□□ -0.19
RAE1-207ENST00000462438 DAGLBQ8NCG7 672 aa13.89□□□□□ -0.19
RAE1-207ENST00000462438 OPTNQ96CV9 577 aa13.89□□□□□ -0.19
RAE1-207ENST00000462438 GLT8D2Q9H1C3 349 aa13.89□□□□□ -0.19
RAE1-207ENST00000462438 ORC3Q9UBD5 711 aaPredicted RBP13.89□□□□□ -0.19
RAE1-207ENST00000462438 PNMA6FA0A0J9YX94 578 aa13.89□□□□□ -0.19
RAE1-207ENST00000462438 USP17L15C9J2P7 530 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms