RNA–Protein interactions for RNA: ENST00000462421.1

DDX39B-216, Transcript of DExD-box helicase 39B, humanhuman

TSL 3

Gene DDX39B, Length 618 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-216ENST00000462421 RIOX2Q8IUF8 465 aa10.52□□□□□ -0.73
DDX39B-216ENST00000462421 STAG1Q8WVM7 1258 aa10.52□□□□□ -0.73
DDX39B-216ENST00000462421 GMCL1Q96IK5 515 aa10.52□□□□□ -0.73
DDX39B-216ENST00000462421 TTC14Q96N46 770 aa10.52□□□□□ -0.73
DDX39B-216ENST00000462421 NUP88Q99567 741 aaPredicted RBP10.52□□□□□ -0.73
DDX39B-216ENST00000462421 BTBD7Q9P203 1132 aa10.52□□□□□ -0.73
DDX39B-216ENST00000462421 MYH8P13535 1937 aa10.52□□□□□ -0.73
DDX39B-216ENST00000462421 PHIPQ8WWQ0 1821 aa10.51□□□□□ -0.73
DDX39B-216ENST00000462421 MCCP23508 829 aa10.51□□□□□ -0.73
DDX39B-216ENST00000462421 TKFCQ3LXA3 575 aa10.51□□□□□ -0.73
DDX39B-216ENST00000462421 MORN1Q5T089 497 aa10.51□□□□□ -0.73
DDX39B-216ENST00000462421 LHX8Q68G74 356 aa10.51□□□□□ -0.73
DDX39B-216ENST00000462421 RCSD1Q6JBY9 416 aa10.51□□□□□ -0.73
DDX39B-216ENST00000462421 ZNF589Q86UQ0 364 aaPredicted RBP10.51□□□□□ -0.73
DDX39B-216ENST00000462421 ANKLE1Q8NAG6 615 aa10.51□□□□□ -0.73
DDX39B-216ENST00000462421 CHST13Q8NET6 341 aa10.51□□□□□ -0.73
DDX39B-216ENST00000462421 MKL1Q969V6 931 aa10.51□□□□□ -0.73
DDX39B-216ENST00000462421 PTPRFP10586 1907 aa10.5□□□□□ -0.73
DDX39B-216ENST00000462421 B4DLN1 442 aa10.5□□□□□ -0.73
DDX39B-216ENST00000462421 KBTBD13C9JR72 458 aa10.5□□□□□ -0.73
DDX39B-216ENST00000462421 EVI5O60447 810 aa10.5□□□□□ -0.73
DDX39B-216ENST00000462421 CNMDO75829 334 aa10.5□□□□□ -0.73
DDX39B-216ENST00000462421 MRPL12P52815 198 aaKnown RBP10.5□□□□□ -0.73
DDX39B-216ENST00000462421 TMEM132BQ14DG7 1078 aa10.5□□□□□ -0.73
DDX39B-216ENST00000462421 RNF20Q5VTR2 975 aa10.5□□□□□ -0.73
DDX39B-216ENST00000462421 OLFML2BQ68BL8 750 aa10.5□□□□□ -0.73
DDX39B-216ENST00000462421 CCDC174Q6PII3 467 aa10.5□□□□□ -0.73
DDX39B-216ENST00000462421 TRIB2Q92519 343 aa10.5□□□□□ -0.73
DDX39B-216ENST00000462421 CHMP4CQ96CF2 233 aa10.5□□□□□ -0.73
DDX39B-216ENST00000462421 NBPF3Q9H094 633 aa10.5□□□□□ -0.73
DDX39B-216ENST00000462421 ACAD9Q9H845 621 aa10.5□□□□□ -0.73
DDX39B-216ENST00000462421 SPC25Q9HBM1 224 aa10.5□□□□□ -0.73
DDX39B-216ENST00000462421 HOMER2Q9NSB8 354 aa10.5□□□□□ -0.73
DDX39B-216ENST00000462421 TCP11L1Q9NUJ3 509 aa10.5□□□□□ -0.73
DDX39B-216ENST00000462421 FBXO28Q9NVF7 368 aa10.5□□□□□ -0.73
DDX39B-216ENST00000462421 GJD2Q9UKL4 321 aa10.5□□□□□ -0.73
DDX39B-216ENST00000462421 DDX52Q9Y2R4 599 aaKnown RBP eCLIP10.5□□□□□ -0.73
DDX39B-216ENST00000462421 BAZ2AQ9UIF9 1905 aaKnown RBP10.5□□□□□ -0.73
DDX39B-216ENST00000462421 IGKV6D-41A0A0C4DH26 115 aa10.49□□□□□ -0.73
DDX39B-216ENST00000462421 PEX10O60683 326 aa10.49□□□□□ -0.73
DDX39B-216ENST00000462421 CAP1Q01518 475 aa10.49□□□□□ -0.73
DDX39B-216ENST00000462421 TRAF1Q13077 416 aa10.49□□□□□ -0.73
DDX39B-216ENST00000462421 GPATCH4Q5T3I0 446 aaKnown RBP10.49□□□□□ -0.73
DDX39B-216ENST00000462421 IFIT1BQ5T764 474 aaKnown RBP10.49□□□□□ -0.73
DDX39B-216ENST00000462421 KCTD1Q719H9 257 aa10.49□□□□□ -0.73
DDX39B-216ENST00000462421 ARRDC4Q8NCT1 418 aa10.49□□□□□ -0.73
DDX39B-216ENST00000462421 RAVER2Q9HCJ3 691 aaKnown RBP10.49□□□□□ -0.73
DDX39B-216ENST00000462421 PAK6Q9NQU5 681 aaPredicted RBP10.49□□□□□ -0.73
DDX39B-216ENST00000462421 PRKAG2Q9UGJ0 569 aa10.49□□□□□ -0.73
DDX39B-216ENST00000462421 NRBP1Q9UHY1 535 aa10.49□□□□□ -0.73
DDX39B-216ENST00000462421 CCPG1Q9ULG6 757 aa10.49□□□□□ -0.73
DDX39B-216ENST00000462421 DIS3Q9Y2L1 958 aaKnown RBP10.49□□□□□ -0.73
DDX39B-216ENST00000462421 PFASO15067 1338 aa10.49□□□□□ -0.73
DDX39B-216ENST00000462421 POTEB2H3BUK9 544 aa10.48□□□□□ -0.73
DDX39B-216ENST00000462421 SMIM22K7EJ46 135 aa10.48□□□□□ -0.73
DDX39B-216ENST00000462421 KDM4AO75164 1064 aa10.48□□□□□ -0.73
DDX39B-216ENST00000462421 HOXC6P09630 235 aa10.48□□□□□ -0.73
DDX39B-216ENST00000462421 RARBP10826 455 aa10.48□□□□□ -0.73
DDX39B-216ENST00000462421 ALAS1P13196 640 aa10.48□□□□□ -0.73
DDX39B-216ENST00000462421 CACNB2Q08289 660 aaPredicted RBP10.48□□□□□ -0.73
DDX39B-216ENST00000462421 KIAA1755Q5JYT7 1200 aa10.48□□□□□ -0.73
DDX39B-216ENST00000462421 SYDE2Q5VT97 1194 aa10.48□□□□□ -0.73
DDX39B-216ENST00000462421 NOL8Q76FK4 1167 aaKnown RBP10.48□□□□□ -0.73
DDX39B-216ENST00000462421 DGKHQ86XP1 1220 aa10.48□□□□□ -0.73
DDX39B-216ENST00000462421 SIAH1Q8IUQ4 282 aa10.48□□□□□ -0.73
DDX39B-216ENST00000462421 MSL3Q8N5Y2 521 aaKnown RBP10.48□□□□□ -0.73
DDX39B-216ENST00000462421 NCOA7Q8NI08 942 aa10.48□□□□□ -0.73
DDX39B-216ENST00000462421 ZSCAN10Q96SZ4 725 aaPredicted RBP10.48□□□□□ -0.73
DDX39B-216ENST00000462421 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.48□□□□□ -0.73
DDX39B-216ENST00000462421 C11orf49Q9H6J7 331 aa10.48□□□□□ -0.73
DDX39B-216ENST00000462421 SLC38A10Q9HBR0 1119 aa10.48□□□□□ -0.73
DDX39B-216ENST00000462421 GPCPD1Q9NPB8 672 aa10.48□□□□□ -0.73
DDX39B-216ENST00000462421 ANO2Q9NQ90 1003 aa10.48□□□□□ -0.73
DDX39B-216ENST00000462421 DDX20Q9UHI6 824 aaKnown RBP10.48□□□□□ -0.73
DDX39B-216ENST00000462421 B4E1Z4 1266 aa10.47□□□□□ -0.73
DDX39B-216ENST00000462421 ATP2A1O14983 1001 aa10.47□□□□□ -0.73
DDX39B-216ENST00000462421 NMT2O60551 498 aa10.47□□□□□ -0.73
DDX39B-216ENST00000462421 PLA2G6O60733 806 aa10.47□□□□□ -0.73
DDX39B-216ENST00000462421 PARP1P09874 1014 aaKnown RBP10.47□□□□□ -0.73
DDX39B-216ENST00000462421 GSPT1P15170 499 aaKnown RBP10.47□□□□□ -0.73
DDX39B-216ENST00000462421 CHMLP26374 656 aa10.47□□□□□ -0.73
DDX39B-216ENST00000462421 CYP2C19P33261 490 aa10.47□□□□□ -0.73
DDX39B-216ENST00000462421 FGD1P98174 961 aa10.47□□□□□ -0.73
DDX39B-216ENST00000462421 CCL14Q16627 93 aa10.47□□□□□ -0.73
DDX39B-216ENST00000462421 SYNE3Q6ZMZ3 975 aa10.47□□□□□ -0.73
DDX39B-216ENST00000462421 NFXL1Q6ZNB6 911 aa10.47□□□□□ -0.73
DDX39B-216ENST00000462421 PNMA1Q8ND90 353 aa10.47□□□□□ -0.73
DDX39B-216ENST00000462421 TRERF1Q96PN7 1200 aa10.47□□□□□ -0.73
DDX39B-216ENST00000462421 TMEM47Q9BQJ4 181 aa10.47□□□□□ -0.73
DDX39B-216ENST00000462421 ZKSCAN3Q9BRR0 538 aa10.47□□□□□ -0.73
DDX39B-216ENST00000462421 RNF146Q9NTX7 359 aa10.47□□□□□ -0.73
DDX39B-216ENST00000462421 ADD3Q9UEY8 706 aaKnown RBP10.47□□□□□ -0.73
DDX39B-216ENST00000462421 ZHX1Q9UKY1 873 aaPredicted RBP10.47□□□□□ -0.73
DDX39B-216ENST00000462421 FRMPD2Q68DX3 1309 aaPredicted RBP10.47□□□□□ -0.73
DDX39B-216ENST00000462421 PTPDC1A2A3K4 754 aa10.46□□□□□ -0.73
DDX39B-216ENST00000462421 ASB14A6NK59 587 aa10.46□□□□□ -0.73
DDX39B-216ENST00000462421 HAX1O00165 279 aa10.46□□□□□ -0.73
DDX39B-216ENST00000462421 IFIT3O14879 490 aaKnown RBP10.46□□□□□ -0.73
DDX39B-216ENST00000462421 EIF5BO60841 1220 aaKnown RBP10.46□□□□□ -0.73
DDX39B-216ENST00000462421 PGK2P07205 417 aa10.46□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 181 ms