RNA–Protein interactions for RNA: ENST00000462352.5

CPNE1-221, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 625 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-221ENST00000462352 PAGR1Q9BTK6 254 aa13.77□□□□□ -0.21
CPNE1-221ENST00000462352 TXNRD2Q9NNW7 524 aa13.77□□□□□ -0.21
CPNE1-221ENST00000462352 MAD2L2Q9UI95 211 aa13.77□□□□□ -0.21
CPNE1-221ENST00000462352 ADAMTS5Q9UNA0 930 aa13.77□□□□□ -0.21
CPNE1-221ENST00000462352 RABGAP1Q9Y3P9 1069 aa13.77□□□□□ -0.21
CPNE1-221ENST00000462352 KLF18A0A0U1RQI7 1052 aa13.76□□□□□ -0.21
CPNE1-221ENST00000462352 PALM3A6NDB9 673 aaPredicted RBP13.76□□□□□ -0.21
CPNE1-221ENST00000462352 VWA5AO00534 786 aa13.76□□□□□ -0.21
CPNE1-221ENST00000462352 CNMDO75829 334 aa13.76□□□□□ -0.21
CPNE1-221ENST00000462352 CALM1P0DP23 149 aa13.76□□□□□ -0.21
CPNE1-221ENST00000462352 CALM2P0DP24 149 aa13.76□□□□□ -0.21
CPNE1-221ENST00000462352 CALM3P0DP25 149 aa13.76□□□□□ -0.21
CPNE1-221ENST00000462352 RXRAP19793 462 aa13.76□□□□□ -0.21
CPNE1-221ENST00000462352 CTCFP49711 727 aaPredicted RBP13.76□□□□□ -0.21
CPNE1-221ENST00000462352 FAM110CQ1W6H9 321 aa13.76□□□□□ -0.21
CPNE1-221ENST00000462352 NOM1Q5C9Z4 860 aaKnown RBP13.76□□□□□ -0.21
CPNE1-221ENST00000462352 SYNE3Q6ZMZ3 975 aa13.76□□□□□ -0.21
CPNE1-221ENST00000462352 RAB11FIP4Q86YS3 637 aa13.76□□□□□ -0.21
CPNE1-221ENST00000462352 MB21D1Q8N884 522 aa13.76□□□□□ -0.21
CPNE1-221ENST00000462352 MAP3K14Q99558 947 aa13.76□□□□□ -0.21
CPNE1-221ENST00000462352 UBA5Q9GZZ9 404 aa13.76□□□□□ -0.21
CPNE1-221ENST00000462352 BTBD7Q9P203 1132 aa13.76□□□□□ -0.21
CPNE1-221ENST00000462352 MORF4L1Q9UBU8 362 aa13.76□□□□□ -0.21
CPNE1-221ENST00000462352 PRR12Q9ULL5 1215 aa13.76□□□□□ -0.21
CPNE1-221ENST00000462352 A0A0G2JMZ2 1700 aa13.76□□□□□ -0.21
CPNE1-221ENST00000462352 ZBTB43O43298 467 aa13.75□□□□□ -0.21
CPNE1-221ENST00000462352 FKTNO75072 461 aa13.75□□□□□ -0.21
CPNE1-221ENST00000462352 NEK4P51957 841 aa13.75□□□□□ -0.21
CPNE1-221ENST00000462352 ERVK-9P63128 1117 aa13.75□□□□□ -0.21
CPNE1-221ENST00000462352 ERVK-24P63145 666 aa13.75□□□□□ -0.21
CPNE1-221ENST00000462352 SP3Q02447 781 aa13.75□□□□□ -0.21
CPNE1-221ENST00000462352 Q3C1V9 767 aa13.75□□□□□ -0.21
CPNE1-221ENST00000462352 SYDE2Q5VT97 1194 aa13.75□□□□□ -0.21
CPNE1-221ENST00000462352 MICU3Q86XE3 530 aa13.75□□□□□ -0.21
CPNE1-221ENST00000462352 CCDC144CPQ8IYA2 1237 aa13.75□□□□□ -0.21
CPNE1-221ENST00000462352 REPS2Q8NFH8 660 aa13.75□□□□□ -0.21
CPNE1-221ENST00000462352 GPRC5AQ8NFJ5 357 aa13.75□□□□□ -0.21
CPNE1-221ENST00000462352 CTCFLQ8NI51 663 aaPredicted RBP13.75□□□□□ -0.21
CPNE1-221ENST00000462352 ZNF296Q8WUU4 475 aaPredicted RBP13.75□□□□□ -0.21
CPNE1-221ENST00000462352 ALDH8A1Q9H2A2 487 aaPredicted RBP13.75□□□□□ -0.21
CPNE1-221ENST00000462352 CPVLQ9H3G5 476 aa13.75□□□□□ -0.21
CPNE1-221ENST00000462352 KLRF2D3W0D1 207 aa13.74□□□□□ -0.21
CPNE1-221ENST00000462352 ZBED4O75132 1171 aa13.74□□□□□ -0.21
CPNE1-221ENST00000462352 FDX1P10109 184 aa13.74□□□□□ -0.21
CPNE1-221ENST00000462352 KIF5BP33176 963 aa13.74□□□□□ -0.21
CPNE1-221ENST00000462352 LBX1P52954 281 aa13.74□□□□□ -0.21
CPNE1-221ENST00000462352 RCAN1P53805 252 aa13.74□□□□□ -0.21
CPNE1-221ENST00000462352 AK2P54819 239 aa13.74□□□□□ -0.21
CPNE1-221ENST00000462352 EVCP57679 992 aa13.74□□□□□ -0.21
CPNE1-221ENST00000462352 TMEM132BQ14DG7 1078 aa13.74□□□□□ -0.21
CPNE1-221ENST00000462352 FANCBQ8NB91 859 aa13.74□□□□□ -0.21
CPNE1-221ENST00000462352 SLC38A10Q9HBR0 1119 aa13.74□□□□□ -0.21
CPNE1-221ENST00000462352 NAP1L2Q9ULW6 460 aaPredicted RBP13.74□□□□□ -0.21
CPNE1-221ENST00000462352 GOLGA8AA7E2F4 631 aa13.73□□□□□ -0.21
CPNE1-221ENST00000462352 GOLGA8BA8MQT2 603 aa13.73□□□□□ -0.21
CPNE1-221ENST00000462352 SNAP25P60880 206 aa13.73□□□□□ -0.21
CPNE1-221ENST00000462352 LACTBP83111 547 aaPredicted RBP13.73□□□□□ -0.21
CPNE1-221ENST00000462352 RABEP1Q15276 862 aa13.73□□□□□ -0.21
CPNE1-221ENST00000462352 ANKRD1Q15327 319 aa13.73□□□□□ -0.21
CPNE1-221ENST00000462352 NBPF11Q86T75 865 aa13.73□□□□□ -0.21
CPNE1-221ENST00000462352 ADGRF4Q8IZF3 695 aa13.73□□□□□ -0.21
CPNE1-221ENST00000462352 LARP6Q9BRS8 491 aaKnown RBP13.73□□□□□ -0.21
CPNE1-221ENST00000462352 SPATC1LQ9H0A9 340 aa13.73□□□□□ -0.21
CPNE1-221ENST00000462352 RANBP17Q9H2T7 1088 aaKnown RBP13.73□□□□□ -0.21
CPNE1-221ENST00000462352 ZNF214Q9UL59 606 aaPredicted RBP13.73□□□□□ -0.21
CPNE1-221ENST00000462352 HPS5Q9UPZ3 1129 aa13.73□□□□□ -0.21
CPNE1-221ENST00000462352 CTDP1Q9Y5B0 961 aaPredicted RBP13.73□□□□□ -0.21
CPNE1-221ENST00000462352 DHX16O60231 1041 aaKnown RBP13.72□□□□□ -0.21
CPNE1-221ENST00000462352 ECM2O94769 699 aaPredicted RBP13.72□□□□□ -0.21
CPNE1-221ENST00000462352 PLEKHA8P1O95397 391 aa13.72□□□□□ -0.21
CPNE1-221ENST00000462352 PDIA3P30101 505 aaKnown RBP13.72□□□□□ -0.21
CPNE1-221ENST00000462352 STAT3P40763 770 aa13.72□□□□□ -0.21
CPNE1-221ENST00000462352 METAP2P50579 478 aaKnown RBP eCLIP13.72□□□□□ -0.21
CPNE1-221ENST00000462352 PLS1Q14651 629 aa13.72□□□□□ -0.21
CPNE1-221ENST00000462352 RTN1Q16799 776 aa13.72□□□□□ -0.21
CPNE1-221ENST00000462352 SLC35G1Q2M3R5 365 aa13.72□□□□□ -0.21
CPNE1-221ENST00000462352 CCDC174Q6PII3 467 aa13.72□□□□□ -0.21
CPNE1-221ENST00000462352 CPXCR1Q8N123 301 aa13.72□□□□□ -0.21
CPNE1-221ENST00000462352 CD99L2Q8TCZ2 262 aa13.72□□□□□ -0.21
CPNE1-221ENST00000462352 ERO1AQ96HE7 468 aa13.72□□□□□ -0.21
CPNE1-221ENST00000462352 MOV10L1Q9BXT6 1211 aaKnown RBP13.72□□□□□ -0.21
CPNE1-221ENST00000462352 ARHGAP39Q9C0H5 1083 aa13.72□□□□□ -0.21
CPNE1-221ENST00000462352 JMJD4Q9H9V9 463 aa13.72□□□□□ -0.21
CPNE1-221ENST00000462352 RAVER2Q9HCJ3 691 aaKnown RBP13.72□□□□□ -0.21
CPNE1-221ENST00000462352 VAT1LQ9HCJ6 419 aa13.72□□□□□ -0.21
CPNE1-221ENST00000462352 RBM28Q9NW13 759 aaKnown RBP13.72□□□□□ -0.21
CPNE1-221ENST00000462352 NID2Q14112 1375 aa13.71□□□□□ -0.21
CPNE1-221ENST00000462352 COL11A1P12107 1806 aaPredicted RBP13.71□□□□□ -0.21
CPNE1-221ENST00000462352 ZNF536O15090 1300 aa13.71□□□□□ -0.21
CPNE1-221ENST00000462352 ATP2A1O14983 1001 aa13.71□□□□□ -0.21
CPNE1-221ENST00000462352 CYTH3O43739 400 aa13.71□□□□□ -0.21
CPNE1-221ENST00000462352 CTGFP29279 349 aa13.71□□□□□ -0.21
CPNE1-221ENST00000462352 CDC27P30260 824 aa13.71□□□□□ -0.21
CPNE1-221ENST00000462352 GNAQP50148 359 aa13.71□□□□□ -0.21
CPNE1-221ENST00000462352 OAZ1P54368 228 aa13.71□□□□□ -0.21
CPNE1-221ENST00000462352 CCNA1P78396 465 aa13.71□□□□□ -0.21
CPNE1-221ENST00000462352 CAP1Q01518 475 aa13.71□□□□□ -0.21
CPNE1-221ENST00000462352 KIF22Q14807 665 aa13.71□□□□□ -0.21
CPNE1-221ENST00000462352 SNRNP48Q6IEG0 339 aaKnown RBP13.71□□□□□ -0.21
CPNE1-221ENST00000462352 TMTC3Q6ZXV5 915 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms