RNA–Protein interactions for RNA: ENST00000462276.1

RTF1-202, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 4

Gene RTF1, Length 485 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-202ENST00000462276 NUCB2P80303 420 aa12.35□□□□□ -0.43
RTF1-202ENST00000462276 IKQ13123 557 aaPredicted RBP12.35□□□□□ -0.43
RTF1-202ENST00000462276 COG2Q14746 738 aa12.35□□□□□ -0.43
RTF1-202ENST00000462276 PFKFB3Q16875 520 aaPredicted RBP12.35□□□□□ -0.43
RTF1-202ENST00000462276 FAM83BQ5T0W9 1011 aa12.35□□□□□ -0.43
RTF1-202ENST00000462276 SYDE2Q5VT97 1194 aa12.35□□□□□ -0.43
RTF1-202ENST00000462276 LARP1BQ659C4 914 aaKnown RBP12.35□□□□□ -0.43
RTF1-202ENST00000462276 RGMBQ6NW40 437 aa12.35□□□□□ -0.43
RTF1-202ENST00000462276 KCTD1Q719H9 257 aa12.35□□□□□ -0.43
RTF1-202ENST00000462276 CCDC84Q86UT8 332 aaPredicted RBP12.35□□□□□ -0.43
RTF1-202ENST00000462276 CCDC12Q8WUD4 166 aaPredicted RBP12.35□□□□□ -0.43
RTF1-202ENST00000462276 MTMR8Q96EF0 704 aa12.35□□□□□ -0.43
RTF1-202ENST00000462276 WNK4Q96J92 1243 aa12.35□□□□□ -0.43
RTF1-202ENST00000462276 SH3GLB2Q9NR46 395 aa12.35□□□□□ -0.43
RTF1-202ENST00000462276 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.35□□□□□ -0.43
RTF1-202ENST00000462276 ISY1Q9ULR0 285 aaKnown RBP12.35□□□□□ -0.43
RTF1-202ENST00000462276 POLR2AP24928 1970 aaKnown RBP12.35□□□□□ -0.43
RTF1-202ENST00000462276 GREB1LQ9C091 1923 aaPredicted RBP12.35□□□□□ -0.43
RTF1-202ENST00000462276 FRMPD2Q68DX3 1309 aaPredicted RBP12.35□□□□□ -0.43
RTF1-202ENST00000462276 PCNTO95613 3336 aa12.34□□□□□ -0.43
RTF1-202ENST00000462276 ZBTB5O15062 677 aa12.34□□□□□ -0.43
RTF1-202ENST00000462276 CYTH3O43739 400 aa12.34□□□□□ -0.43
RTF1-202ENST00000462276 JAK2O60674 1132 aa12.34□□□□□ -0.43
RTF1-202ENST00000462276 SCG2P13521 617 aa12.34□□□□□ -0.43
RTF1-202ENST00000462276 FDPSP14324 419 aaKnown RBP12.34□□□□□ -0.43
RTF1-202ENST00000462276 ZNF157P51786 506 aaPredicted RBP12.34□□□□□ -0.43
RTF1-202ENST00000462276 TRIM29Q14134 588 aa12.34□□□□□ -0.43
RTF1-202ENST00000462276 ZYXQ15942 572 aaKnown RBP12.34□□□□□ -0.43
RTF1-202ENST00000462276 KIAA1755Q5JYT7 1200 aa12.34□□□□□ -0.43
RTF1-202ENST00000462276 GALNT17Q6IS24 598 aa12.34□□□□□ -0.43
RTF1-202ENST00000462276 CATSPERGQ6ZRH7 1159 aa12.34□□□□□ -0.43
RTF1-202ENST00000462276 REM2Q8IYK8 340 aaPredicted RBP12.34□□□□□ -0.43
RTF1-202ENST00000462276 ADGRF4Q8IZF3 695 aa12.34□□□□□ -0.43
RTF1-202ENST00000462276 CCDC82Q8N4S0 544 aa12.34□□□□□ -0.43
RTF1-202ENST00000462276 GTF3C2Q8WUA4 911 aaPredicted RBP12.34□□□□□ -0.43
RTF1-202ENST00000462276 PHKBQ93100 1093 aa12.34□□□□□ -0.43
RTF1-202ENST00000462276 DDX11Q96FC9 970 aa12.34□□□□□ -0.43
RTF1-202ENST00000462276 SLF1Q9BQI6 1058 aa12.34□□□□□ -0.43
RTF1-202ENST00000462276 UBA5Q9GZZ9 404 aa12.34□□□□□ -0.43
RTF1-202ENST00000462276 GLT8D2Q9H1C3 349 aa12.34□□□□□ -0.43
RTF1-202ENST00000462276 RPAP3Q9H6T3 665 aaPredicted RBP12.34□□□□□ -0.43
RTF1-202ENST00000462276 JMJD4Q9H9V9 463 aa12.34□□□□□ -0.43
RTF1-202ENST00000462276 ZCCHC17Q9NP64 241 aaKnown RBP12.34□□□□□ -0.43
RTF1-202ENST00000462276 AGTPBP1Q9UPW5 1226 aa12.34□□□□□ -0.43
RTF1-202ENST00000462276 CNTNAP5Q8WYK1 1306 aa12.34□□□□□ -0.43
RTF1-202ENST00000462276 MANSC4A6NHS7 340 aaPredicted RBP12.33□□□□□ -0.44
RTF1-202ENST00000462276 FLOT1O75955 427 aa12.33□□□□□ -0.44
RTF1-202ENST00000462276 OSBPP22059 807 aa12.33□□□□□ -0.44
RTF1-202ENST00000462276 DDIT3P35638 169 aa12.33□□□□□ -0.44
RTF1-202ENST00000462276 TTBK2Q6IQ55 1244 aa12.33□□□□□ -0.44
RTF1-202ENST00000462276 MB21D1Q8N884 522 aa12.33□□□□□ -0.44
RTF1-202ENST00000462276 CNKSR2Q8WXI2 1034 aa12.33□□□□□ -0.44
RTF1-202ENST00000462276 MS4A4AQ96JQ5 239 aa12.33□□□□□ -0.44
RTF1-202ENST00000462276 C8orf76Q96K31 380 aa12.33□□□□□ -0.44
RTF1-202ENST00000462276 NUP88Q99567 741 aaPredicted RBP12.33□□□□□ -0.44
RTF1-202ENST00000462276 ALG1Q9BT22 464 aa12.33□□□□□ -0.44
RTF1-202ENST00000462276 TANGO6Q9C0B7 1094 aa12.33□□□□□ -0.44
RTF1-202ENST00000462276 MAF1Q9H063 256 aa12.33□□□□□ -0.44
RTF1-202ENST00000462276 CREBZFQ9NS37 354 aa12.33□□□□□ -0.44
RTF1-202ENST00000462276 CHMP5Q9NZZ3 219 aa12.33□□□□□ -0.44
RTF1-202ENST00000462276 PNMA3Q9UL41 463 aa12.33□□□□□ -0.44
RTF1-202ENST00000462276 PPP1R9AQ9ULJ8 1098 aa12.33□□□□□ -0.44
RTF1-202ENST00000462276 PRR12Q9ULL5 1215 aa12.33□□□□□ -0.44
RTF1-202ENST00000462276 ABT1Q9ULW3 272 aaKnown RBP12.33□□□□□ -0.44
RTF1-202ENST00000462276 WDR33Q9C0J8 1336 aaKnown RBP12.33□□□□□ -0.44
RTF1-202ENST00000462276 TESPA1A2RU30 521 aaPredicted RBP12.32□□□□□ -0.44
RTF1-202ENST00000462276 H3BQV1 296 aa12.32□□□□□ -0.44
RTF1-202ENST00000462276 ZBED4O75132 1171 aa12.32□□□□□ -0.44
RTF1-202ENST00000462276 SYT1P21579 422 aa12.32□□□□□ -0.44
RTF1-202ENST00000462276 CALML3P27482 149 aa12.32□□□□□ -0.44
RTF1-202ENST00000462276 DSG3P32926 999 aa12.32□□□□□ -0.44
RTF1-202ENST00000462276 SLC16A2P36021 539 aa12.32□□□□□ -0.44
RTF1-202ENST00000462276 APLP1P51693 650 aa12.32□□□□□ -0.44
RTF1-202ENST00000462276 OAZ1P54368 228 aa12.32□□□□□ -0.44
RTF1-202ENST00000462276 SAFBQ15424 915 aaKnown RBP eCLIP12.32□□□□□ -0.44
RTF1-202ENST00000462276 PKN1Q16512 942 aa12.32□□□□□ -0.44
RTF1-202ENST00000462276 PPP1R18Q6NYC8 613 aa12.32□□□□□ -0.44
RTF1-202ENST00000462276 LBX2Q6XYB7 198 aa12.32□□□□□ -0.44
RTF1-202ENST00000462276 ANKRD23Q86SG2 305 aa12.32□□□□□ -0.44
RTF1-202ENST00000462276 CMTR1Q8N1G2 835 aaKnown RBP12.32□□□□□ -0.44
RTF1-202ENST00000462276 SPRYD3Q8NCJ5 442 aa12.32□□□□□ -0.44
RTF1-202ENST00000462276 CCDC148Q8NFR7 591 aa12.32□□□□□ -0.44
RTF1-202ENST00000462276 FBXO18Q8NFZ0 1043 aa12.32□□□□□ -0.44
RTF1-202ENST00000462276 AMNQ9BXJ7 453 aa12.32□□□□□ -0.44
RTF1-202ENST00000462276 RANBP17Q9H2T7 1088 aaKnown RBP12.32□□□□□ -0.44
RTF1-202ENST00000462276 VAT1LQ9HCJ6 419 aa12.32□□□□□ -0.44
RTF1-202ENST00000462276 FOXD4L1Q9NU39 408 aa12.32□□□□□ -0.44
RTF1-202ENST00000462276 BARHL2Q9NY43 387 aa12.32□□□□□ -0.44
RTF1-202ENST00000462276 ADAMTS5Q9UNA0 930 aa12.32□□□□□ -0.44
RTF1-202ENST00000462276 CTDP1Q9Y5B0 961 aaPredicted RBP12.32□□□□□ -0.44
RTF1-202ENST00000462276 ATP2A1O14983 1001 aa12.31□□□□□ -0.44
RTF1-202ENST00000462276 STX6O43752 255 aa12.31□□□□□ -0.44
RTF1-202ENST00000462276 SLC10A3P09131 477 aa12.31□□□□□ -0.44
RTF1-202ENST00000462276 GNA11P29992 359 aa12.31□□□□□ -0.44
RTF1-202ENST00000462276 GJA5P36382 358 aa12.31□□□□□ -0.44
RTF1-202ENST00000462276 IRX3P78415 501 aaPredicted RBP12.31□□□□□ -0.44
RTF1-202ENST00000462276 SLC35G1Q2M3R5 365 aa12.31□□□□□ -0.44
RTF1-202ENST00000462276 MCTP2Q6DN12 878 aa12.31□□□□□ -0.44
RTF1-202ENST00000462276 OTUD7BQ6GQQ9 843 aa12.31□□□□□ -0.44
RTF1-202ENST00000462276 GADL1Q6ZQY3 521 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms