RNA–Protein interactions for RNA: ENST00000462030.5

HPS3-204, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 2

Gene HPS3, Length 2,486 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-204ENST00000462030 CCDC122Q5T0U0 273 aa20.74■□□□□ 0.91
HPS3-204ENST00000462030 PLEKHA4Q9H4M7 779 aa20.74■□□□□ 0.91
HPS3-204ENST00000462030 DYNLL1P63167 89 aaKnown RBP20.73■□□□□ 0.91
HPS3-204ENST00000462030 EVX2Q03828 476 aa20.73■□□□□ 0.91
HPS3-204ENST00000462030 SUSD4Q5VX71 490 aa20.73■□□□□ 0.91
HPS3-204ENST00000462030 GDAP1L1Q96MZ0 367 aa20.73■□□□□ 0.91
HPS3-204ENST00000462030 DNAJC7Q99615 494 aa20.73■□□□□ 0.91
HPS3-204ENST00000462030 LUC7L2Q9Y383 392 aaKnown RBP20.73■□□□□ 0.91
HPS3-204ENST00000462030 SAR1BQ9Y6B6 198 aa20.73■□□□□ 0.91
HPS3-204ENST00000462030 ZMYND10O75800 440 aa20.73■□□□□ 0.91
HPS3-204ENST00000462030 RIN2Q8WYP3 895 aaPredicted RBP20.73■□□□□ 0.91
HPS3-204ENST00000462030 RMND1Q9NWS8 449 aa20.73■□□□□ 0.91
HPS3-204ENST00000462030 HPCAL4Q9UM19 191 aa20.73■□□□□ 0.91
HPS3-204ENST00000462030 DLEC1Q9Y238 1755 aa20.73■□□□□ 0.91
HPS3-204ENST00000462030 ZC3H4Q9UPT8 1303 aaKnown RBP20.73■□□□□ 0.91
HPS3-204ENST00000462030 LGALS16A8MUM7 142 aa20.72■□□□□ 0.91
HPS3-204ENST00000462030 PRPF6O94906 941 aaKnown RBP20.72■□□□□ 0.91
HPS3-204ENST00000462030 AARSP49588 968 aaKnown RBP eCLIP20.72■□□□□ 0.91
HPS3-204ENST00000462030 EVA1CP58658 441 aa20.72■□□□□ 0.91
HPS3-204ENST00000462030 NLRP5P59047 1200 aa20.72■□□□□ 0.91
HPS3-204ENST00000462030 GSPT2Q8IYD1 628 aaKnown RBP20.72■□□□□ 0.91
HPS3-204ENST00000462030 RIOK1Q9BRS2 568 aaKnown RBP20.72■□□□□ 0.91
HPS3-204ENST00000462030 VIPAS39Q9H9C1 493 aa20.72■□□□□ 0.91
HPS3-204ENST00000462030 H7C1D1 291 aa20.72■□□□□ 0.91
HPS3-204ENST00000462030 NMT2O60551 498 aa20.72■□□□□ 0.91
HPS3-204ENST00000462030 IQCA1Q86XH1 822 aa20.72■□□□□ 0.91
HPS3-204ENST00000462030 ADSSL1Q8N142 457 aa20.72■□□□□ 0.91
HPS3-204ENST00000462030 ZNF507Q8TCN5 953 aa20.72■□□□□ 0.91
HPS3-204ENST00000462030 ERVV-1B6SEH8 477 aa20.71■□□□□ 0.91
HPS3-204ENST00000462030 PAPD7Q5XG87 772 aaKnown RBP20.71■□□□□ 0.91
HPS3-204ENST00000462030 BRINP3Q76B58 766 aa20.71■□□□□ 0.91
HPS3-204ENST00000462030 RCCD1A6NED2 376 aa20.71■□□□□ 0.91
HPS3-204ENST00000462030 CALM1P0DP23 149 aa20.71■□□□□ 0.91
HPS3-204ENST00000462030 CALM2P0DP24 149 aa20.71■□□□□ 0.91
HPS3-204ENST00000462030 CALM3P0DP25 149 aa20.71■□□□□ 0.91
HPS3-204ENST00000462030 STAT6P42226 847 aa20.71■□□□□ 0.91
HPS3-204ENST00000462030 AFAP1L1Q8TED9 768 aa20.71■□□□□ 0.91
HPS3-204ENST00000462030 PYM1Q9BRP8 204 aaKnown RBP20.71■□□□□ 0.91
HPS3-204ENST00000462030 CAPN11Q9UMQ6 739 aa20.71■□□□□ 0.91
HPS3-204ENST00000462030 ANKRD65E5RJM6 399 aa20.7■□□□□ 0.9
HPS3-204ENST00000462030 DDAH1O94760 285 aa20.7■□□□□ 0.9
HPS3-204ENST00000462030 MYBL2P10244 700 aa20.7■□□□□ 0.9
HPS3-204ENST00000462030 SCG2P13521 617 aa20.7■□□□□ 0.9
HPS3-204ENST00000462030 CHRNDQ07001 517 aa20.7■□□□□ 0.9
HPS3-204ENST00000462030 LACRTQ9GZZ8 138 aa20.7■□□□□ 0.9
HPS3-204ENST00000462030 GNL3LQ9NVN8 582 aaKnown RBP20.7■□□□□ 0.9
HPS3-204ENST00000462030 MKRN1Q9UHC7 482 aaKnown RBP20.7■□□□□ 0.9
HPS3-204ENST00000462030 PDS5AQ29RF7 1337 aaKnown RBP20.7■□□□□ 0.9
HPS3-204ENST00000462030 CACNA1SQ13698 1873 aa20.7■□□□□ 0.9
HPS3-204ENST00000462030 A0A1W2PQC6 194 aa20.7■□□□□ 0.9
HPS3-204ENST00000462030 TRAPPC10P48553 1259 aa20.7■□□□□ 0.9
HPS3-204ENST00000462030 KIAA1328Q86T90 577 aa20.7■□□□□ 0.9
HPS3-204ENST00000462030 JAKMIP2Q96AA8 810 aa20.7■□□□□ 0.9
HPS3-204ENST00000462030 COL1A1P02452 1464 aaPredicted RBP20.7■□□□□ 0.9
HPS3-204ENST00000462030 COL4A1P02462 1669 aa20.7■□□□□ 0.9
HPS3-204ENST00000462030 COL22A1Q8NFW1 1626 aaPredicted RBP20.69■□□□□ 0.9
HPS3-204ENST00000462030 WTIPA6NIX2 430 aaPredicted RBP20.69■□□□□ 0.9
HPS3-204ENST00000462030 ZNF185O15231 689 aa20.69■□□□□ 0.9
HPS3-204ENST00000462030 NAALADL2Q58DX5 795 aa20.69■□□□□ 0.9
HPS3-204ENST00000462030 C4orf32Q8N8J7 132 aa20.69■□□□□ 0.9
HPS3-204ENST00000462030 CTCFLQ8NI51 663 aaPredicted RBP20.69■□□□□ 0.9
HPS3-204ENST00000462030 COG1Q8WTW3 980 aa20.69■□□□□ 0.9
HPS3-204ENST00000462030 AGPAT5Q9NUQ2 364 aa20.69■□□□□ 0.9
HPS3-204ENST00000462030 PP2D1A8MPX8 630 aa20.69■□□□□ 0.9
HPS3-204ENST00000462030 EIF3CLB5ME19 914 aaKnown RBP20.69■□□□□ 0.9
HPS3-204ENST00000462030 PDE2AO00408 941 aaPredicted RBP20.69■□□□□ 0.9
HPS3-204ENST00000462030 IGHMBP2P38935 993 aaKnown RBP20.69■□□□□ 0.9
HPS3-204ENST00000462030 KLK7P49862 253 aa20.69■□□□□ 0.9
HPS3-204ENST00000462030 MAP9Q49MG5 647 aa20.69■□□□□ 0.9
HPS3-204ENST00000462030 GOLGA6L1Q8N7Z2 621 aa20.69■□□□□ 0.9
HPS3-204ENST00000462030 EEF2KMTQ96G04 330 aa20.69■□□□□ 0.9
HPS3-204ENST00000462030 EIF3CQ99613 913 aaKnown RBP20.69■□□□□ 0.9
HPS3-204ENST00000462030 FAM205AQ6ZU69 1335 aa20.69■□□□□ 0.9
HPS3-204ENST00000462030 B4DLN1 442 aa20.68■□□□□ 0.9
HPS3-204ENST00000462030 LONP1P36776 959 aaKnown RBP20.68■□□□□ 0.9
HPS3-204ENST00000462030 GYG1P46976 350 aa20.68■□□□□ 0.9
HPS3-204ENST00000462030 TSR1Q2NL82 804 aaKnown RBP20.68■□□□□ 0.9
HPS3-204ENST00000462030 TRIM47Q96LD4 638 aa20.68■□□□□ 0.9
HPS3-204ENST00000462030 DISC1Q9NRI5 854 aa20.68■□□□□ 0.9
HPS3-204ENST00000462030 EEF1GP26641 437 aaKnown RBP20.68■□□□□ 0.9
HPS3-204ENST00000462030 STIM1Q13586 685 aa20.68■□□□□ 0.9
HPS3-204ENST00000462030 MEA1Q16626 185 aa20.68■□□□□ 0.9
HPS3-204ENST00000462030 CTR9Q6PD62 1173 aa20.68■□□□□ 0.9
HPS3-204ENST00000462030 PPP1R3FQ6ZSY5 799 aaPredicted RBP20.68■□□□□ 0.9
HPS3-204ENST00000462030 DUSP10Q9Y6W6 482 aa20.68■□□□□ 0.9
HPS3-204ENST00000462030 TARSL2A2RTX5 802 aaKnown RBP20.67■□□□□ 0.9
HPS3-204ENST00000462030 MCM3P25205 808 aa20.67■□□□□ 0.9
HPS3-204ENST00000462030 GGCXP38435 758 aa20.67■□□□□ 0.9
HPS3-204ENST00000462030 IL6STP40189 918 aaPredicted RBP20.67■□□□□ 0.9
HPS3-204ENST00000462030 PFKFB3Q16875 520 aaPredicted RBP20.67■□□□□ 0.9
HPS3-204ENST00000462030 FAM47AQ5JRC9 791 aa20.67■□□□□ 0.9
HPS3-204ENST00000462030 RASGRP4Q8TDF6 673 aa20.67■□□□□ 0.9
HPS3-204ENST00000462030 PLIN2Q99541 437 aa20.67■□□□□ 0.9
HPS3-204ENST00000462030 TTYH3Q9C0H2 523 aa20.67■□□□□ 0.9
HPS3-204ENST00000462030 RASSF10A6NK89 507 aa20.67■□□□□ 0.9
HPS3-204ENST00000462030 BCL9O00512 1426 aa20.67■□□□□ 0.9
HPS3-204ENST00000462030 KRT86O43790 486 aa20.67■□□□□ 0.9
HPS3-204ENST00000462030 KLRC4O43908 158 aa20.67■□□□□ 0.9
HPS3-204ENST00000462030 KRT83P78385 493 aa20.67■□□□□ 0.9
HPS3-204ENST00000462030 CKAP4Q07065 602 aaKnown RBP20.67■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms