RNA–Protein interactions for RNA: ENST00000461869.5

SF3A3-203, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 3

Gene SF3A3, Length 776 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-203ENST00000461869 XPNPEP3Q9NQH7 507 aa18.37■□□□□ 0.53
SF3A3-203ENST00000461869 ATP8A2Q9NTI2 1148 aa18.37■□□□□ 0.53
SF3A3-203ENST00000461869 NRBP1Q9UHY1 535 aa18.37■□□□□ 0.53
SF3A3-203ENST00000461869 PHF24Q9UPV7 400 aa18.37■□□□□ 0.53
SF3A3-203ENST00000461869 RNF113AO15541 343 aaKnown RBP18.36■□□□□ 0.53
SF3A3-203ENST00000461869 MBD4O95243 580 aa18.36■□□□□ 0.53
SF3A3-203ENST00000461869 CDK8P49336 464 aa18.36■□□□□ 0.53
SF3A3-203ENST00000461869 TLE2Q04725 743 aa18.36■□□□□ 0.53
SF3A3-203ENST00000461869 SLFNL1Q499Z3 407 aa18.36■□□□□ 0.53
SF3A3-203ENST00000461869 RNF180Q86T96 592 aa18.36■□□□□ 0.53
SF3A3-203ENST00000461869 HELLSQ9NRZ9 838 aa18.36■□□□□ 0.53
SF3A3-203ENST00000461869 ADAMTS5Q9UNA0 930 aa18.36■□□□□ 0.53
SF3A3-203ENST00000461869 TACC3Q9Y6A5 838 aa18.36■□□□□ 0.53
SF3A3-203ENST00000461869 A0A0C4DFX4 3053 aa18.35■□□□□ 0.53
SF3A3-203ENST00000461869 CYP2D7A0A087X1C5 515 aa18.35■□□□□ 0.53
SF3A3-203ENST00000461869 PGK1P00558 417 aa18.35■□□□□ 0.53
SF3A3-203ENST00000461869 PGK2P07205 417 aa18.35■□□□□ 0.53
SF3A3-203ENST00000461869 EEF2P13639 858 aaKnown RBP18.35■□□□□ 0.53
SF3A3-203ENST00000461869 ADD2P35612 726 aa18.35■□□□□ 0.53
SF3A3-203ENST00000461869 KCTD2Q14681 263 aa18.35■□□□□ 0.53
SF3A3-203ENST00000461869 C12orf60Q5U649 245 aa18.35■□□□□ 0.53
SF3A3-203ENST00000461869 RIOX2Q8IUF8 465 aa18.35■□□□□ 0.53
SF3A3-203ENST00000461869 AMOTL1Q8IY63 956 aa18.35■□□□□ 0.53
SF3A3-203ENST00000461869 MAFAQ8NHW3 353 aaPredicted RBP18.35■□□□□ 0.53
SF3A3-203ENST00000461869 TINF2Q9BSI4 451 aa18.35■□□□□ 0.53
SF3A3-203ENST00000461869 FBXO28Q9NVF7 368 aa18.35■□□□□ 0.53
SF3A3-203ENST00000461869 A0A0D9SFI3 127 aa18.34■□□□□ 0.53
SF3A3-203ENST00000461869 USP17L12C9JPN9 530 aa18.34■□□□□ 0.53
SF3A3-203ENST00000461869 USP17L21D6R901 530 aa18.34■□□□□ 0.53
SF3A3-203ENST00000461869 SMIM22K7EJ46 135 aa18.34■□□□□ 0.53
SF3A3-203ENST00000461869 CLTBP09497 229 aa18.34■□□□□ 0.53
SF3A3-203ENST00000461869 ITGB8P26012 769 aa18.34■□□□□ 0.53
SF3A3-203ENST00000461869 STAT3P40763 770 aa18.34■□□□□ 0.53
SF3A3-203ENST00000461869 ZNF792Q3KQV3 632 aa18.34■□□□□ 0.53
SF3A3-203ENST00000461869 MCMDC2Q4G0Z9 681 aa18.34■□□□□ 0.53
SF3A3-203ENST00000461869 ZMYM1Q5SVZ6 1142 aa18.34■□□□□ 0.53
SF3A3-203ENST00000461869 MYLIPQ8WY64 445 aa18.34■□□□□ 0.53
SF3A3-203ENST00000461869 DDRGK1Q96HY6 314 aa18.34■□□□□ 0.53
SF3A3-203ENST00000461869 FAM227BQ96M60 508 aa18.34■□□□□ 0.53
SF3A3-203ENST00000461869 USP26Q9BXU7 913 aa18.34■□□□□ 0.53
SF3A3-203ENST00000461869 TTYH1Q9H313 450 aaPredicted RBP18.34■□□□□ 0.53
SF3A3-203ENST00000461869 KANSL2Q9H9L4 492 aa18.34■□□□□ 0.53
SF3A3-203ENST00000461869 DIS3Q9Y2L1 958 aaKnown RBP18.34■□□□□ 0.53
SF3A3-203ENST00000461869 VWA5AO00534 786 aa18.33■□□□□ 0.52
SF3A3-203ENST00000461869 RAD21O60216 631 aa18.33■□□□□ 0.52
SF3A3-203ENST00000461869 TAL1P17542 331 aaPredicted RBP18.33■□□□□ 0.52
SF3A3-203ENST00000461869 UBE3CQ15386 1083 aa18.33■□□□□ 0.52
SF3A3-203ENST00000461869 C16orf86Q6ZW13 317 aa18.33■□□□□ 0.52
SF3A3-203ENST00000461869 APPBP2Q92624 585 aa18.33■□□□□ 0.52
SF3A3-203ENST00000461869 RNPC3Q96LT9 517 aaKnown RBP18.33■□□□□ 0.52
SF3A3-203ENST00000461869 GOPCQ9HD26 462 aa18.33■□□□□ 0.52
SF3A3-203ENST00000461869 PPP1R9AQ9ULJ8 1098 aa18.33■□□□□ 0.52
SF3A3-203ENST00000461869 DNAH12Q6ZR08 3092 aa18.33■□□□□ 0.52
SF3A3-203ENST00000461869 CCDC171Q6TFL3 1326 aa18.32■□□□□ 0.52
SF3A3-203ENST00000461869 A0A1W2PQ45 241 aaPredicted RBP18.32■□□□□ 0.52
SF3A3-203ENST00000461869 A0A1W2PQY0 241 aa18.32■□□□□ 0.52
SF3A3-203ENST00000461869 PQBP1O60828 265 aaKnown RBP18.32■□□□□ 0.52
SF3A3-203ENST00000461869 AKR1A1P14550 325 aa18.32■□□□□ 0.52
SF3A3-203ENST00000461869 RAG1P15918 1043 aa18.32■□□□□ 0.52
SF3A3-203ENST00000461869 KIAA0355O15063 1070 aa18.31■□□□□ 0.52
SF3A3-203ENST00000461869 ZNF865P0CJ78 1059 aaPredicted RBP18.31■□□□□ 0.52
SF3A3-203ENST00000461869 FOSL2P15408 326 aa18.31■□□□□ 0.52
SF3A3-203ENST00000461869 COPB2P35606 906 aa18.31■□□□□ 0.52
SF3A3-203ENST00000461869 EPHB4P54760 987 aa18.31■□□□□ 0.52
SF3A3-203ENST00000461869 FAM83BQ5T0W9 1011 aa18.31■□□□□ 0.52
SF3A3-203ENST00000461869 LSG1Q9H089 658 aaKnown RBP18.31■□□□□ 0.52
SF3A3-203ENST00000461869 TMEM39AQ9NV64 488 aa18.31■□□□□ 0.52
SF3A3-203ENST00000461869 ZNF214Q9UL59 606 aaPredicted RBP18.31■□□□□ 0.52
SF3A3-203ENST00000461869 CNPY2Q9Y2B0 182 aa18.31■□□□□ 0.52
SF3A3-203ENST00000461869 SLC4A4Q9Y6R1 1079 aa18.31■□□□□ 0.52
SF3A3-203ENST00000461869 UNC80Q8N2C7 3258 aa18.31■□□□□ 0.52
SF3A3-203ENST00000461869 CHGBP05060 677 aa18.3■□□□□ 0.52
SF3A3-203ENST00000461869 ANAPC15P60006 121 aa18.3■□□□□ 0.52
SF3A3-203ENST00000461869 FPGSQ05932 587 aa18.3■□□□□ 0.52
SF3A3-203ENST00000461869 CTR9Q6PD62 1173 aa18.3■□□□□ 0.52
SF3A3-203ENST00000461869 REPS2Q8NFH8 660 aa18.3■□□□□ 0.52
SF3A3-203ENST00000461869 LENG1Q96BZ8 264 aaPredicted RBP18.3■□□□□ 0.52
SF3A3-203ENST00000461869 TSEN34Q9BSV6 310 aaKnown RBP18.3■□□□□ 0.52
SF3A3-203ENST00000461869 IL25Q9H293 177 aa18.3■□□□□ 0.52
SF3A3-203ENST00000461869 ROBO3Q96MS0 1386 aa18.3■□□□□ 0.52
SF3A3-203ENST00000461869 MYH8P13535 1937 aa18.29■□□□□ 0.52
SF3A3-203ENST00000461869 PARP14Q460N5 1801 aa18.29■□□□□ 0.52
SF3A3-203ENST00000461869 NUP133Q8WUM0 1156 aa18.29■□□□□ 0.52
SF3A3-203ENST00000461869 STARD7Q9NQZ5 370 aa18.29■□□□□ 0.52
SF3A3-203ENST00000461869 ZNFX1Q9P2E3 1918 aaKnown RBP18.29■□□□□ 0.52
SF3A3-203ENST00000461869 BAZ2AQ9UIF9 1905 aaKnown RBP18.28■□□□□ 0.52
SF3A3-203ENST00000461869 TMEM265A0A087WTH1 108 aa18.28■□□□□ 0.52
SF3A3-203ENST00000461869 DCDC2CA8MYV0 355 aa18.28■□□□□ 0.52
SF3A3-203ENST00000461869 ADAMTS4O75173 837 aa18.28■□□□□ 0.52
SF3A3-203ENST00000461869 ACLYP53396 1101 aa18.28■□□□□ 0.52
SF3A3-203ENST00000461869 FAAP100Q0VG06 881 aa18.28■□□□□ 0.52
SF3A3-203ENST00000461869 ANKRD33Q7Z3H0 272 aa18.28■□□□□ 0.52
SF3A3-203ENST00000461869 MSL3Q8N5Y2 521 aaKnown RBP18.28■□□□□ 0.52
SF3A3-203ENST00000461869 IL27Q8NEV9 243 aa18.28■□□□□ 0.52
SF3A3-203ENST00000461869 DDX11Q96FC9 970 aa18.28■□□□□ 0.52
SF3A3-203ENST00000461869 SLF1Q9BQI6 1058 aa18.28■□□□□ 0.52
SF3A3-203ENST00000461869 GNL3Q9BVP2 549 aaKnown RBP eCLIP18.28■□□□□ 0.52
SF3A3-203ENST00000461869 FAM184BQ9ULE4 1060 aa18.28■□□□□ 0.52
SF3A3-203ENST00000461869 COL11A1P12107 1806 aaPredicted RBP18.28■□□□□ 0.52
SF3A3-203ENST00000461869 SYNRGQ9UMZ2 1314 aa18.27■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms