RNA–Protein interactions for RNA: ENST00000461433.1

SSBP1-202, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 1 (best)

Gene SSBP1, Length 1,694 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-202ENST00000461433 CPVLQ9H3G5 476 aa13.17□□□□□ -0.3
SSBP1-202ENST00000461433 TXNRD2Q9NNW7 524 aa13.17□□□□□ -0.3
SSBP1-202ENST00000461433 HPS5Q9UPZ3 1129 aa13.17□□□□□ -0.3
SSBP1-202ENST00000461433 CNMDO75829 334 aa13.16□□□□□ -0.3
SSBP1-202ENST00000461433 FGD1P98174 961 aa13.16□□□□□ -0.3
SSBP1-202ENST00000461433 FAM160B2Q86V87 743 aa13.16□□□□□ -0.3
SSBP1-202ENST00000461433 FANCBQ8NB91 859 aa13.16□□□□□ -0.3
SSBP1-202ENST00000461433 REPS2Q8NFH8 660 aa13.16□□□□□ -0.3
SSBP1-202ENST00000461433 SMCR8Q8TEV9 937 aaPredicted RBP13.16□□□□□ -0.3
SSBP1-202ENST00000461433 CHURC1Q8WUH1 139 aa13.16□□□□□ -0.3
SSBP1-202ENST00000461433 NUP133Q8WUM0 1156 aa13.16□□□□□ -0.3
SSBP1-202ENST00000461433 UBA5Q9GZZ9 404 aa13.16□□□□□ -0.3
SSBP1-202ENST00000461433 FAM217BQ9NTX9 383 aaPredicted RBP13.16□□□□□ -0.3
SSBP1-202ENST00000461433 BTBD7Q9P203 1132 aa13.16□□□□□ -0.3
SSBP1-202ENST00000461433 CPA4Q9UI42 421 aa13.16□□□□□ -0.3
SSBP1-202ENST00000461433 TSKSQ9UJT2 592 aa13.16□□□□□ -0.3
SSBP1-202ENST00000461433 PRR12Q9ULL5 1215 aa13.16□□□□□ -0.3
SSBP1-202ENST00000461433 KLRF2D3W0D1 207 aa13.15□□□□□ -0.3
SSBP1-202ENST00000461433 VWA5AO00534 786 aa13.15□□□□□ -0.3
SSBP1-202ENST00000461433 CALM1P0DP23 149 aa13.15□□□□□ -0.3
SSBP1-202ENST00000461433 CALM2P0DP24 149 aa13.15□□□□□ -0.3
SSBP1-202ENST00000461433 CALM3P0DP25 149 aa13.15□□□□□ -0.3
SSBP1-202ENST00000461433 PDIA3P30101 505 aaKnown RBP13.15□□□□□ -0.3
SSBP1-202ENST00000461433 GCLCP48506 637 aaPredicted RBP13.15□□□□□ -0.3
SSBP1-202ENST00000461433 NBPF11Q86T75 865 aa13.15□□□□□ -0.3
SSBP1-202ENST00000461433 MICU3Q86XE3 530 aa13.15□□□□□ -0.3
SSBP1-202ENST00000461433 CCDC144CPQ8IYA2 1237 aa13.15□□□□□ -0.3
SSBP1-202ENST00000461433 KIFC2Q96AC6 838 aa13.15□□□□□ -0.3
SSBP1-202ENST00000461433 BEGAINQ9BUH8 593 aa13.15□□□□□ -0.3
SSBP1-202ENST00000461433 FOXN1O15353 648 aa13.15□□□□□ -0.31
SSBP1-202ENST00000461433 ZBTB43O43298 467 aa13.15□□□□□ -0.31
SSBP1-202ENST00000461433 CYTH3O43739 400 aa13.15□□□□□ -0.31
SSBP1-202ENST00000461433 HSPA1AP0DMV8 641 aaKnown RBP13.15□□□□□ -0.31
SSBP1-202ENST00000461433 HSPA1BP0DMV9 641 aaKnown RBP13.15□□□□□ -0.31
SSBP1-202ENST00000461433 RCAN1P53805 252 aa13.15□□□□□ -0.31
SSBP1-202ENST00000461433 RABEP1Q15276 862 aa13.15□□□□□ -0.31
SSBP1-202ENST00000461433 Q3C1V9 767 aa13.15□□□□□ -0.31
SSBP1-202ENST00000461433 SYDE2Q5VT97 1194 aa13.15□□□□□ -0.31
SSBP1-202ENST00000461433 SAMD1Q6SPF0 538 aaPredicted RBP13.15□□□□□ -0.31
SSBP1-202ENST00000461433 ANKRD13CQ8N6S4 541 aa13.15□□□□□ -0.31
SSBP1-202ENST00000461433 SLC38A10Q9HBR0 1119 aa13.15□□□□□ -0.31
SSBP1-202ENST00000461433 MORF4L1Q9UBU8 362 aa13.15□□□□□ -0.31
SSBP1-202ENST00000461433 TPCN1Q9ULQ1 816 aa13.15□□□□□ -0.31
SSBP1-202ENST00000461433 ISY1Q9ULR0 285 aaKnown RBP13.15□□□□□ -0.31
SSBP1-202ENST00000461433 RABGAP1Q9Y3P9 1069 aa13.15□□□□□ -0.31
SSBP1-202ENST00000461433 NID2Q14112 1375 aa13.14□□□□□ -0.31
SSBP1-202ENST00000461433 SMCHD1A6NHR9 2005 aa13.14□□□□□ -0.31
SSBP1-202ENST00000461433 GPR25O00155 361 aa13.14□□□□□ -0.31
SSBP1-202ENST00000461433 PLEKHA8P1O95397 391 aa13.14□□□□□ -0.31
SSBP1-202ENST00000461433 CDC27P30260 824 aa13.14□□□□□ -0.31
SSBP1-202ENST00000461433 SNAP25P60880 206 aa13.14□□□□□ -0.31
SSBP1-202ENST00000461433 TMEM132BQ14DG7 1078 aa13.14□□□□□ -0.31
SSBP1-202ENST00000461433 FAM110CQ1W6H9 321 aa13.14□□□□□ -0.31
SSBP1-202ENST00000461433 NOM1Q5C9Z4 860 aaKnown RBP13.14□□□□□ -0.31
SSBP1-202ENST00000461433 SYNE3Q6ZMZ3 975 aa13.14□□□□□ -0.31
SSBP1-202ENST00000461433 ADGRF4Q8IZF3 695 aa13.14□□□□□ -0.31
SSBP1-202ENST00000461433 GTF3C2Q8WUA4 911 aaPredicted RBP13.14□□□□□ -0.31
SSBP1-202ENST00000461433 ZNF274Q96GC6 653 aaPredicted RBP13.14□□□□□ -0.31
SSBP1-202ENST00000461433 ZNF214Q9UL59 606 aaPredicted RBP13.14□□□□□ -0.31
SSBP1-202ENST00000461433 BAZ2BQ9UIF8 2168 aaKnown RBP13.14□□□□□ -0.31
SSBP1-202ENST00000461433 ZSWIM8A7E2V4 1837 aa13.14□□□□□ -0.31
SSBP1-202ENST00000461433 ZNF536O15090 1300 aa13.13□□□□□ -0.31
SSBP1-202ENST00000461433 MGAMO43451 1857 aa13.13□□□□□ -0.31
SSBP1-202ENST00000461433 GOLGA8BA8MQT2 603 aa13.13□□□□□ -0.31
SSBP1-202ENST00000461433 ERVK-9P63128 1117 aa13.13□□□□□ -0.31
SSBP1-202ENST00000461433 ERVK-24P63145 666 aa13.13□□□□□ -0.31
SSBP1-202ENST00000461433 CAP1Q01518 475 aa13.13□□□□□ -0.31
SSBP1-202ENST00000461433 FUT2Q10981 343 aa13.13□□□□□ -0.31
SSBP1-202ENST00000461433 IKQ13123 557 aaPredicted RBP13.13□□□□□ -0.31
SSBP1-202ENST00000461433 ANKRD1Q15327 319 aa13.13□□□□□ -0.31
SSBP1-202ENST00000461433 CMTR1Q8N1G2 835 aaKnown RBP13.13□□□□□ -0.31
SSBP1-202ENST00000461433 SRBD1Q8N5C6 995 aaKnown RBP13.13□□□□□ -0.31
SSBP1-202ENST00000461433 MB21D1Q8N884 522 aa13.13□□□□□ -0.31
SSBP1-202ENST00000461433 CTCFLQ8NI51 663 aaPredicted RBP13.13□□□□□ -0.31
SSBP1-202ENST00000461433 MTMR8Q96EF0 704 aa13.13□□□□□ -0.31
SSBP1-202ENST00000461433 PAGR1Q9BTK6 254 aa13.13□□□□□ -0.31
SSBP1-202ENST00000461433 RANBP17Q9H2T7 1088 aaKnown RBP13.13□□□□□ -0.31
SSBP1-202ENST00000461433 RIOX1Q9H6W3 641 aa13.13□□□□□ -0.31
SSBP1-202ENST00000461433 JMJD4Q9H9V9 463 aa13.13□□□□□ -0.31
SSBP1-202ENST00000461433 MYH6P13533 1939 aa13.12□□□□□ -0.31
SSBP1-202ENST00000461433 GOLGA8AA7E2F4 631 aa13.12□□□□□ -0.31
SSBP1-202ENST00000461433 CD2BP2O95400 341 aaKnown RBP13.12□□□□□ -0.31
SSBP1-202ENST00000461433 FDX1P10109 184 aa13.12□□□□□ -0.31
SSBP1-202ENST00000461433 HSPA8P11142 646 aaKnown RBP13.12□□□□□ -0.31
SSBP1-202ENST00000461433 SMARCA1P28370 1054 aa13.12□□□□□ -0.31
SSBP1-202ENST00000461433 CTGFP29279 349 aa13.12□□□□□ -0.31
SSBP1-202ENST00000461433 KIF5BP33176 963 aa13.12□□□□□ -0.31
SSBP1-202ENST00000461433 ADD1P35611 737 aaKnown RBP13.12□□□□□ -0.31
SSBP1-202ENST00000461433 TMTC3Q6ZXV5 915 aa13.12□□□□□ -0.31
SSBP1-202ENST00000461433 GPRC5AQ8NFJ5 357 aa13.12□□□□□ -0.31
SSBP1-202ENST00000461433 NAP1L2Q9ULW6 460 aaPredicted RBP13.12□□□□□ -0.31
SSBP1-202ENST00000461433 ATP2A1O14983 1001 aa13.12□□□□□ -0.31
SSBP1-202ENST00000461433 LARGE1O95461 756 aa13.12□□□□□ -0.31
SSBP1-202ENST00000461433 METAP2P50579 478 aaKnown RBP eCLIP13.12□□□□□ -0.31
SSBP1-202ENST00000461433 SP3Q02447 781 aa13.12□□□□□ -0.31
SSBP1-202ENST00000461433 PPP2R5BQ15173 497 aa13.12□□□□□ -0.31
SSBP1-202ENST00000461433 NTRK3Q16288 839 aa13.12□□□□□ -0.31
SSBP1-202ENST00000461433 ME3Q16798 604 aa13.12□□□□□ -0.31
SSBP1-202ENST00000461433 RTN1Q16799 776 aa13.12□□□□□ -0.31
SSBP1-202ENST00000461433 ZNF296Q8WUU4 475 aaPredicted RBP13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms