RNA–Protein interactions for RNA: ENST00000461249.1

GPN1-206, Transcript of GPN-loop GTPase 1, humanhuman

TSL 1 (best)

Gene GPN1, Length 969 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN1-206ENST00000461249 ATMINO43313 823 aaPredicted RBP9.46□□□□□ -0.9
GPN1-206ENST00000461249 TRPA1O75762 1119 aa9.46□□□□□ -0.9
GPN1-206ENST00000461249 NDUFB10O96000 172 aa9.46□□□□□ -0.9
GPN1-206ENST00000461249 ALDH1A1P00352 501 aa9.46□□□□□ -0.9
GPN1-206ENST00000461249 VCAM1P19320 739 aa9.46□□□□□ -0.9
GPN1-206ENST00000461249 CASTP20810 708 aaKnown RBP9.46□□□□□ -0.9
GPN1-206ENST00000461249 HOXA7P31268 230 aaPredicted RBP9.46□□□□□ -0.9
GPN1-206ENST00000461249 SSTR3P32745 418 aaPredicted RBP9.46□□□□□ -0.9
GPN1-206ENST00000461249 USP17L24Q0WX57 530 aa9.46□□□□□ -0.9
GPN1-206ENST00000461249 PABPC4Q13310 644 aaKnown RBP eCLIP9.46□□□□□ -0.9
GPN1-206ENST00000461249 IFIT1BQ5T764 474 aaKnown RBP9.46□□□□□ -0.9
GPN1-206ENST00000461249 BLOC1S2Q6QNY1 142 aa9.46□□□□□ -0.9
GPN1-206ENST00000461249 CATSPERGQ6ZRH7 1159 aa9.46□□□□□ -0.9
GPN1-206ENST00000461249 JMYQ8N9B5 988 aa9.46□□□□□ -0.9
GPN1-206ENST00000461249 SP7Q8TDD2 431 aaPredicted RBP9.46□□□□□ -0.9
GPN1-206ENST00000461249 POM121Q96HA1 1249 aa9.46□□□□□ -0.9
GPN1-206ENST00000461249 TMEM87BQ96K49 555 aa9.46□□□□□ -0.9
GPN1-206ENST00000461249 TCEANC2Q96MN5 208 aa9.46□□□□□ -0.9
GPN1-206ENST00000461249 C22orf23Q9BZE7 217 aa9.46□□□□□ -0.9
GPN1-206ENST00000461249 TM6SF1Q9BZW5 370 aa9.46□□□□□ -0.9
GPN1-206ENST00000461249 RPAP3Q9H6T3 665 aaPredicted RBP9.46□□□□□ -0.9
GPN1-206ENST00000461249 UPF2Q9HAU5 1272 aaKnown RBP9.46□□□□□ -0.9
GPN1-206ENST00000461249 SENP2Q9HC62 589 aa9.46□□□□□ -0.9
GPN1-206ENST00000461249 ZSWIM6Q9HCJ5 1215 aa9.46□□□□□ -0.9
GPN1-206ENST00000461249 NPDC1Q9NQX5 325 aaPredicted RBP9.46□□□□□ -0.9
GPN1-206ENST00000461249 WBP1LQ9NX94 342 aa9.46□□□□□ -0.9
GPN1-206ENST00000461249 RNF186Q9NXI6 227 aa9.46□□□□□ -0.9
GPN1-206ENST00000461249 MTMR7Q9Y216 660 aa9.46□□□□□ -0.9
GPN1-206ENST00000461249 SLC45A1Q9Y2W3 748 aa9.46□□□□□ -0.9
GPN1-206ENST00000461249 SH2B2O14492 632 aaPredicted RBP9.45□□□□□ -0.9
GPN1-206ENST00000461249 WDR46O15213 610 aaKnown RBP9.45□□□□□ -0.9
GPN1-206ENST00000461249 BMP3P12645 472 aa9.45□□□□□ -0.9
GPN1-206ENST00000461249 RPS6KB1P23443 525 aa9.45□□□□□ -0.9
GPN1-206ENST00000461249 SKIV2LQ15477 1246 aaKnown RBP9.45□□□□□ -0.9
GPN1-206ENST00000461249 TAF1CQ15572 869 aaPredicted RBP9.45□□□□□ -0.9
GPN1-206ENST00000461249 FAM83BQ5T0W9 1011 aa9.45□□□□□ -0.9
GPN1-206ENST00000461249 IER5LQ5T953 404 aa9.45□□□□□ -0.9
GPN1-206ENST00000461249 RUFY3Q7L099 469 aa9.45□□□□□ -0.9
GPN1-206ENST00000461249 TMTC2Q8N394 836 aa9.45□□□□□ -0.9
GPN1-206ENST00000461249 PNMA1Q8ND90 353 aa9.45□□□□□ -0.9
GPN1-206ENST00000461249 IL17RAQ96F46 866 aa9.45□□□□□ -0.9
GPN1-206ENST00000461249 NUP88Q99567 741 aaPredicted RBP9.45□□□□□ -0.9
GPN1-206ENST00000461249 P2RX7Q99572 595 aaKnown RBP9.45□□□□□ -0.9
GPN1-206ENST00000461249 BEGAINQ9BUH8 593 aa9.45□□□□□ -0.9
GPN1-206ENST00000461249 TANGO6Q9C0B7 1094 aa9.45□□□□□ -0.9
GPN1-206ENST00000461249 ASCC2Q9H1I8 757 aaPredicted RBP9.45□□□□□ -0.9
GPN1-206ENST00000461249 LY9Q9HBG7 655 aa9.45□□□□□ -0.9
GPN1-206ENST00000461249 ZFYVE28Q9HCC9 887 aa9.45□□□□□ -0.9
GPN1-206ENST00000461249 ZCCHC17Q9NP64 241 aaKnown RBP9.45□□□□□ -0.9
GPN1-206ENST00000461249 PNMA3Q9UL41 463 aa9.45□□□□□ -0.9
GPN1-206ENST00000461249 CYP46A1Q9Y6A2 500 aa9.45□□□□□ -0.9
GPN1-206ENST00000461249 WDR19Q8NEZ3 1342 aa9.45□□□□□ -0.9
GPN1-206ENST00000461249 THSD7BQ9C0I4 1608 aa9.45□□□□□ -0.9
GPN1-206ENST00000461249 LOC285556D6RIA3 1793 aa9.45□□□□□ -0.9
GPN1-206ENST00000461249 CCDC69A6NI79 296 aa9.44□□□□□ -0.9
GPN1-206ENST00000461249 MAP3K7O43318 606 aa9.44□□□□□ -0.9
GPN1-206ENST00000461249 CA12O43570 354 aa9.44□□□□□ -0.9
GPN1-206ENST00000461249 TBC1D8O95759 1140 aa9.44□□□□□ -0.9
GPN1-206ENST00000461249 CYP2C8P10632 490 aa9.44□□□□□ -0.9
GPN1-206ENST00000461249 LIFRP42702 1097 aa9.44□□□□□ -0.9
GPN1-206ENST00000461249 SLC1A4P43007 532 aa9.44□□□□□ -0.9
GPN1-206ENST00000461249 RBM25P49756 843 aaKnown RBP9.44□□□□□ -0.9
GPN1-206ENST00000461249 IRX3P78415 501 aaPredicted RBP9.44□□□□□ -0.9
GPN1-206ENST00000461249 FGD1P98174 961 aa9.44□□□□□ -0.9
GPN1-206ENST00000461249 COG2Q14746 738 aa9.44□□□□□ -0.9
GPN1-206ENST00000461249 NFXL1Q6ZNB6 911 aa9.44□□□□□ -0.9
GPN1-206ENST00000461249 Q6ZUG5 572 aa9.44□□□□□ -0.9
GPN1-206ENST00000461249 KCTD1Q719H9 257 aa9.44□□□□□ -0.9
GPN1-206ENST00000461249 RASGRP2Q7LDG7 609 aa9.44□□□□□ -0.9
GPN1-206ENST00000461249 CATIPQ7Z7H3 387 aa9.44□□□□□ -0.9
GPN1-206ENST00000461249 DCAF4Q8WV16 495 aa9.44□□□□□ -0.9
GPN1-206ENST00000461249 GMCL1Q96IK5 515 aa9.44□□□□□ -0.9
GPN1-206ENST00000461249 PARK7Q99497 189 aaKnown RBP9.44□□□□□ -0.9
GPN1-206ENST00000461249 UPF3BQ9BZI7 483 aaKnown RBP9.44□□□□□ -0.9
GPN1-206ENST00000461249 R3HDMLQ9H3Y0 253 aa9.44□□□□□ -0.9
GPN1-206ENST00000461249 PDRG1Q9NUG6 133 aa9.44□□□□□ -0.9
GPN1-206ENST00000461249 HOXC10Q9NYD6 342 aa9.44□□□□□ -0.9
GPN1-206ENST00000461249 ISY1Q9ULR0 285 aaKnown RBP9.44□□□□□ -0.9
GPN1-206ENST00000461249 FRMPD2Q68DX3 1309 aaPredicted RBP9.43□□□□□ -0.9
GPN1-206ENST00000461249 TMEM232C9JQI7 657 aa9.43□□□□□ -0.9
GPN1-206ENST00000461249 FLOT1O75955 427 aa9.43□□□□□ -0.9
GPN1-206ENST00000461249 PDHBP11177 359 aa9.43□□□□□ -0.9
GPN1-206ENST00000461249 CRHR2Q13324 411 aa9.43□□□□□ -0.9
GPN1-206ENST00000461249 CCDC96Q2M329 555 aa9.43□□□□□ -0.9
GPN1-206ENST00000461249 NUP133Q8WUM0 1156 aa9.43□□□□□ -0.9
GPN1-206ENST00000461249 FBXO28Q9NVF7 368 aa9.43□□□□□ -0.9
GPN1-206ENST00000461249 POLR3EQ9NVU0 708 aa9.43□□□□□ -0.9
GPN1-206ENST00000461249 SAGE1Q9NXZ1 904 aa9.43□□□□□ -0.9
GPN1-206ENST00000461249 FEM1BQ9UK73 627 aa9.43□□□□□ -0.9
GPN1-206ENST00000461249 SLC12A7Q9Y666 1083 aa9.43□□□□□ -0.9
GPN1-206ENST00000461249 TLR2O60603 784 aa9.42□□□□□ -0.9
GPN1-206ENST00000461249 PARP1P09874 1014 aaKnown RBP9.42□□□□□ -0.9
GPN1-206ENST00000461249 GOLGA8HP0CJ92 632 aa9.42□□□□□ -0.9
GPN1-206ENST00000461249 SNHG28P0DPA3 235 aa9.42□□□□□ -0.9
GPN1-206ENST00000461249 HERVK_113P62684 666 aa9.42□□□□□ -0.9
GPN1-206ENST00000461249 ZNF543Q08ER8 600 aa9.42□□□□□ -0.9
GPN1-206ENST00000461249 APOBRQ0VD83 1088 aa9.42□□□□□ -0.9
GPN1-206ENST00000461249 TROAPQ12815 778 aa9.42□□□□□ -0.9
GPN1-206ENST00000461249 GRM4Q14833 912 aa9.42□□□□□ -0.9
GPN1-206ENST00000461249 TTBK2Q6IQ55 1244 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms