RNA–Protein interactions for RNA: ENST00000461194.5

NUP50-212, Transcript of nucleoporin 50, humanhuman

TSL 4

Gene NUP50, Length 550 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-212ENST00000461194 TRPM4Q8TD43 1214 aa8.6□□□□□ -1.03
NUP50-212ENST00000461194 GMLQ99445 158 aa8.6□□□□□ -1.03
NUP50-212ENST00000461194 MEIS3Q99687 375 aa8.6□□□□□ -1.03
NUP50-212ENST00000461194 GSX2Q9BZM3 304 aa8.6□□□□□ -1.03
NUP50-212ENST00000461194 KCNMB2Q9Y691 235 aa8.6□□□□□ -1.03
NUP50-212ENST00000461194 ADAMTSL1Q8N6G6 1762 aa8.6□□□□□ -1.03
NUP50-212ENST00000461194 PDGFAP04085 211 aa8.59□□□□□ -1.03
NUP50-212ENST00000461194 GNAI3P08754 354 aa8.59□□□□□ -1.03
NUP50-212ENST00000461194 IL1R1P14778 569 aa8.59□□□□□ -1.03
NUP50-212ENST00000461194 ZNF280AP59817 542 aaPredicted RBP8.59□□□□□ -1.03
NUP50-212ENST00000461194 PTPN12Q05209 780 aaKnown RBP8.59□□□□□ -1.03
NUP50-212ENST00000461194 LRRC24Q50LG9 513 aa8.59□□□□□ -1.03
NUP50-212ENST00000461194 TTLL5Q6EMB2 1281 aa8.59□□□□□ -1.03
NUP50-212ENST00000461194 SND1Q7KZF4 910 aaKnown RBP eCLIP8.59□□□□□ -1.03
NUP50-212ENST00000461194 KLHDC4Q8TBB5 520 aa8.59□□□□□ -1.03
NUP50-212ENST00000461194 PNMA5Q96PV4 448 aa8.59□□□□□ -1.03
NUP50-212ENST00000461194 TNNQ9UQP3 1299 aa8.59□□□□□ -1.03
NUP50-212ENST00000461194 FNDC3AQ9Y2H6 1198 aaKnown RBP8.59□□□□□ -1.03
NUP50-212ENST00000461194 LRRFIP2Q9Y608 721 aaKnown RBP8.59□□□□□ -1.03
NUP50-212ENST00000461194 MYO3BQ8WXR4 1341 aa8.58□□□□□ -1.04
NUP50-212ENST00000461194 EYA2O00167 538 aa8.58□□□□□ -1.04
NUP50-212ENST00000461194 PDE8BO95263 885 aa8.58□□□□□ -1.04
NUP50-212ENST00000461194 EGFRP00533 1210 aa8.58□□□□□ -1.04
NUP50-212ENST00000461194 TARSP26639 723 aaKnown RBP8.58□□□□□ -1.04
NUP50-212ENST00000461194 MMP14P50281 582 aa8.58□□□□□ -1.04
NUP50-212ENST00000461194 KIF4BQ2VIQ3 1234 aa8.58□□□□□ -1.04
NUP50-212ENST00000461194 TBC1D10BQ4KMP7 808 aaPredicted RBP8.58□□□□□ -1.04
NUP50-212ENST00000461194 METTL24Q5JXM2 366 aa8.58□□□□□ -1.04
NUP50-212ENST00000461194 CDC37L1Q7L3B6 337 aa8.58□□□□□ -1.04
NUP50-212ENST00000461194 ZNF804AQ7Z570 1209 aa8.58□□□□□ -1.04
NUP50-212ENST00000461194 TMEM57Q8N5G2 664 aa8.58□□□□□ -1.04
NUP50-212ENST00000461194 VGLL2Q8N8G2 317 aa8.58□□□□□ -1.04
NUP50-212ENST00000461194 BHMTQ93088 406 aa8.58□□□□□ -1.04
NUP50-212ENST00000461194 NDUFB5O43674 189 aa8.57□□□□□ -1.04
NUP50-212ENST00000461194 CIAO1O76071 339 aa8.57□□□□□ -1.04
NUP50-212ENST00000461194 SASH1O94885 1247 aa8.57□□□□□ -1.04
NUP50-212ENST00000461194 HIBADHP31937 336 aaKnown RBP8.57□□□□□ -1.04
NUP50-212ENST00000461194 PCBP4P57723 403 aaKnown RBP8.57□□□□□ -1.04
NUP50-212ENST00000461194 FKBP1AP62942 108 aaKnown RBP8.57□□□□□ -1.04
NUP50-212ENST00000461194 MTX1Q13505 466 aa8.57□□□□□ -1.04
NUP50-212ENST00000461194 TRIP4Q15650 581 aaPredicted RBP8.57□□□□□ -1.04
NUP50-212ENST00000461194 LCE2AQ5TA79 106 aaPredicted RBP8.57□□□□□ -1.04
NUP50-212ENST00000461194 DZIP1LQ8IYY4 767 aaKnown RBP8.57□□□□□ -1.04
NUP50-212ENST00000461194 TDRD7Q8NHU6 1098 aaKnown RBP8.57□□□□□ -1.04
NUP50-212ENST00000461194 FAM84BQ96KN1 310 aaPredicted RBP8.57□□□□□ -1.04
NUP50-212ENST00000461194 MXD3Q9BW11 206 aa8.57□□□□□ -1.04
NUP50-212ENST00000461194 GLIS2Q9BZE0 524 aaPredicted RBP8.57□□□□□ -1.04
NUP50-212ENST00000461194 MYOZ2Q9NPC6 264 aa8.57□□□□□ -1.04
NUP50-212ENST00000461194 COPRSQ9NQ92 184 aa8.57□□□□□ -1.04
NUP50-212ENST00000461194 SCN9AQ15858 1988 aa8.57□□□□□ -1.04
NUP50-212ENST00000461194 A6NHS1 94 aa8.56□□□□□ -1.04
NUP50-212ENST00000461194 TRAF5O00463 557 aa8.56□□□□□ -1.04
NUP50-212ENST00000461194 GNAI2P04899 355 aa8.56□□□□□ -1.04
NUP50-212ENST00000461194 RPLP1P05386 114 aaKnown RBP8.56□□□□□ -1.04
NUP50-212ENST00000461194 NFKB1P19838 968 aa8.56□□□□□ -1.04
NUP50-212ENST00000461194 FGFR2P21802 821 aa8.56□□□□□ -1.04
NUP50-212ENST00000461194 IL15P40933 162 aaPredicted RBP8.56□□□□□ -1.04
NUP50-212ENST00000461194 USP5P45974 858 aa8.56□□□□□ -1.04
NUP50-212ENST00000461194 MAP2K3P46734 347 aa8.56□□□□□ -1.04
NUP50-212ENST00000461194 GYG1P46976 350 aa8.56□□□□□ -1.04
NUP50-212ENST00000461194 MARSP56192 900 aaKnown RBP8.56□□□□□ -1.04
NUP50-212ENST00000461194 SRSF11Q05519 484 aaKnown RBP8.56□□□□□ -1.04
NUP50-212ENST00000461194 FMR1Q06787 632 aaKnown RBP eCLIP8.56□□□□□ -1.04
NUP50-212ENST00000461194 PUM3Q15397 648 aaKnown RBP8.56□□□□□ -1.04
NUP50-212ENST00000461194 ATG9AQ7Z3C6 839 aa8.56□□□□□ -1.04
NUP50-212ENST00000461194 FBXO33Q7Z6M2 555 aa8.56□□□□□ -1.04
NUP50-212ENST00000461194 SYT9Q86SS6 491 aa8.56□□□□□ -1.04
NUP50-212ENST00000461194 FTSJ3Q8IY81 847 aaKnown RBP8.56□□□□□ -1.04
NUP50-212ENST00000461194 JMYQ8N9B5 988 aa8.56□□□□□ -1.04
NUP50-212ENST00000461194 DCPSQ96C86 337 aaKnown RBP8.56□□□□□ -1.04
NUP50-212ENST00000461194 IGFLR1Q9H665 355 aa8.56□□□□□ -1.04
NUP50-212ENST00000461194 C11orf16Q9NQ32 467 aa8.56□□□□□ -1.04
NUP50-212ENST00000461194 GTF3C5Q9Y5Q8 519 aaPredicted RBP8.56□□□□□ -1.04
NUP50-212ENST00000461194 FAM205AQ6ZU69 1335 aa8.55□□□□□ -1.04
NUP50-212ENST00000461194 SPEF2Q9C093 1822 aa8.55□□□□□ -1.04
NUP50-212ENST00000461194 SRGAP3O43295 1099 aa8.55□□□□□ -1.04
NUP50-212ENST00000461194 IFIT1P09914 478 aaKnown RBP8.55□□□□□ -1.04
NUP50-212ENST00000461194 RLBP1P12271 317 aa8.55□□□□□ -1.04
NUP50-212ENST00000461194 MAPK1P28482 360 aa8.55□□□□□ -1.04
NUP50-212ENST00000461194 CAVIN4Q5BKX8 364 aa8.55□□□□□ -1.04
NUP50-212ENST00000461194 CST9Q5W186 159 aa8.55□□□□□ -1.04
NUP50-212ENST00000461194 KRT26Q7Z3Y9 468 aa8.55□□□□□ -1.04
NUP50-212ENST00000461194 USP48Q86UV5 1035 aa8.55□□□□□ -1.04
NUP50-212ENST00000461194 VPS37DQ86XT2 251 aa8.55□□□□□ -1.04
NUP50-212ENST00000461194 KIAA0825Q8IV33 1275 aa8.55□□□□□ -1.04
NUP50-212ENST00000461194 CERS5Q8N5B7 392 aa8.55□□□□□ -1.04
NUP50-212ENST00000461194 LPIN2Q92539 896 aa8.55□□□□□ -1.04
NUP50-212ENST00000461194 SIL1Q9H173 461 aa8.55□□□□□ -1.04
NUP50-212ENST00000461194 GGA3Q9NZ52 723 aa8.55□□□□□ -1.04
NUP50-212ENST00000461194 ZFATQ9P243 1243 aa8.55□□□□□ -1.04
NUP50-212ENST00000461194 HDAC9Q9UKV0 1011 aa8.55□□□□□ -1.04
NUP50-212ENST00000461194 PA2G4Q9UQ80 394 aaKnown RBP8.55□□□□□ -1.04
NUP50-212ENST00000461194 ASTN2O75129 1339 aaPredicted RBP8.54□□□□□ -1.04
NUP50-212ENST00000461194 CNTNAP1P78357 1384 aa8.54□□□□□ -1.04
NUP50-212ENST00000461194 RASSF10A6NK89 507 aa8.54□□□□□ -1.04
NUP50-212ENST00000461194 WNT10BO00744 389 aa8.54□□□□□ -1.04
NUP50-212ENST00000461194 CELF2O95319 508 aaKnown RBP8.54□□□□□ -1.04
NUP50-212ENST00000461194 SLC5A1P13866 664 aa8.54□□□□□ -1.04
NUP50-212ENST00000461194 TBC1D8BQ0IIM8 1120 aa8.54□□□□□ -1.04
NUP50-212ENST00000461194 DEFB115Q30KQ5 88 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms