RNA–Protein interactions for RNA: ENST00000461173.5

DHFR2-203, Transcript of dihydrofolate reductase 2, humanhuman

TSL 1 (best)

Gene DHFR2, Length 1,831 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DHFR2-203ENST00000461173 AFMP43652 599 aa11.16□□□□□ -0.62
DHFR2-203ENST00000461173 GPSM2P81274 684 aa11.16□□□□□ -0.62
DHFR2-203ENST00000461173 TRIM14Q14142 442 aa11.16□□□□□ -0.62
DHFR2-203ENST00000461173 IL17AQ16552 155 aa11.16□□□□□ -0.62
DHFR2-203ENST00000461173 SYT10Q6XYQ8 523 aa11.16□□□□□ -0.62
DHFR2-203ENST00000461173 DTHD1Q6ZMT9 781 aa11.16□□□□□ -0.62
DHFR2-203ENST00000461173 SMIM5Q71RC9 77 aa11.16□□□□□ -0.62
DHFR2-203ENST00000461173 KRT25Q7Z3Z0 450 aa11.16□□□□□ -0.62
DHFR2-203ENST00000461173 SMAP1Q8IYB5 467 aaPredicted RBP11.16□□□□□ -0.62
DHFR2-203ENST00000461173 ZNF397Q8NF99 534 aaPredicted RBP11.16□□□□□ -0.62
DHFR2-203ENST00000461173 SNED1Q8TER0 1413 aa11.16□□□□□ -0.62
DHFR2-203ENST00000461173 TGFBRAP1Q8WUH2 860 aa11.16□□□□□ -0.62
DHFR2-203ENST00000461173 DISC1Q9NRI5 854 aa11.16□□□□□ -0.62
DHFR2-203ENST00000461173 PCDHA6Q9UN73 950 aa11.16□□□□□ -0.62
DHFR2-203ENST00000461173 PPP2R2CQ9Y2T4 447 aa11.16□□□□□ -0.62
DHFR2-203ENST00000461173 PCDHA8Q9Y5H6 950 aa11.16□□□□□ -0.62
DHFR2-203ENST00000461173 LRRC37AA6NMS7 1700 aa11.16□□□□□ -0.62
DHFR2-203ENST00000461173 H7C1D1 291 aa11.16□□□□□ -0.62
DHFR2-203ENST00000461173 CYTH3O43739 400 aa11.16□□□□□ -0.62
DHFR2-203ENST00000461173 GYS1P13807 737 aa11.16□□□□□ -0.62
DHFR2-203ENST00000461173 PPP1R2P41236 205 aa11.16□□□□□ -0.62
DHFR2-203ENST00000461173 BTDP43251 543 aa11.16□□□□□ -0.62
DHFR2-203ENST00000461173 CDK8P49336 464 aa11.16□□□□□ -0.62
DHFR2-203ENST00000461173 RHBDL3P58872 404 aa11.16□□□□□ -0.62
DHFR2-203ENST00000461173 NOM1Q5C9Z4 860 aaKnown RBP11.16□□□□□ -0.62
DHFR2-203ENST00000461173 PPP4R3BQ5MIZ7 849 aa11.16□□□□□ -0.62
DHFR2-203ENST00000461173 WWC2Q6AWC2 1192 aa11.16□□□□□ -0.62
DHFR2-203ENST00000461173 HOMER1Q86YM7 354 aa11.16□□□□□ -0.62
DHFR2-203ENST00000461173 CNGA4Q8IV77 575 aa11.16□□□□□ -0.62
DHFR2-203ENST00000461173 TRMT44Q8IYL2 757 aaKnown RBP11.16□□□□□ -0.62
DHFR2-203ENST00000461173 STAG2Q8N3U4 1231 aa11.16□□□□□ -0.62
DHFR2-203ENST00000461173 ANKRD20A12PQ8NF67 263 aa11.16□□□□□ -0.62
DHFR2-203ENST00000461173 DYNLL2Q96FJ2 89 aa11.16□□□□□ -0.62
DHFR2-203ENST00000461173 MTRQ99707 1265 aa11.16□□□□□ -0.62
DHFR2-203ENST00000461173 DNAI1Q9UI46 699 aa11.16□□□□□ -0.62
DHFR2-203ENST00000461173 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP11.16□□□□□ -0.62
DHFR2-203ENST00000461173 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.15□□□□□ -0.62
DHFR2-203ENST00000461173 USP17L3A6NCW0 530 aa11.15□□□□□ -0.62
DHFR2-203ENST00000461173 USP17L4A6NCW7 530 aa11.15□□□□□ -0.62
DHFR2-203ENST00000461173 UFL1O94874 794 aa11.15□□□□□ -0.62
DHFR2-203ENST00000461173 TPM1P09493 284 aa11.15□□□□□ -0.62
DHFR2-203ENST00000461173 PARP1P09874 1014 aaKnown RBP11.15□□□□□ -0.62
DHFR2-203ENST00000461173 VEGFAP15692 232 aaPredicted RBP11.15□□□□□ -0.62
DHFR2-203ENST00000461173 PAK1Q13153 545 aa11.15□□□□□ -0.62
DHFR2-203ENST00000461173 DIXDC1Q155Q3 683 aa11.15□□□□□ -0.62
DHFR2-203ENST00000461173 SLC35G1Q2M3R5 365 aa11.15□□□□□ -0.62
DHFR2-203ENST00000461173 USP17L1Q7RTZ2 530 aa11.15□□□□□ -0.62
DHFR2-203ENST00000461173 TEX11Q8IYF3 940 aa11.15□□□□□ -0.62
DHFR2-203ENST00000461173 EYA3Q99504 573 aa11.15□□□□□ -0.62
DHFR2-203ENST00000461173 KBTBD4Q9NVX7 518 aa11.15□□□□□ -0.62
DHFR2-203ENST00000461173 OGFRQ9NZT2 677 aa11.15□□□□□ -0.62
DHFR2-203ENST00000461173 CDK5RAP2Q96SN8 1893 aa11.15□□□□□ -0.62
DHFR2-203ENST00000461173 LTBP1Q14766 1721 aa11.15□□□□□ -0.62
DHFR2-203ENST00000461173 FLT1P17948 1338 aa11.15□□□□□ -0.63
DHFR2-203ENST00000461173 RPN1P04843 607 aaKnown RBP11.14□□□□□ -0.63
DHFR2-203ENST00000461173 SERPINB2P05120 415 aa11.14□□□□□ -0.63
DHFR2-203ENST00000461173 STAT6P42226 847 aa11.14□□□□□ -0.63
DHFR2-203ENST00000461173 TUBB2AQ13885 445 aa11.14□□□□□ -0.63
DHFR2-203ENST00000461173 GRIK5Q16478 980 aa11.14□□□□□ -0.63
DHFR2-203ENST00000461173 COBLL1Q53SF7 1204 aa11.14□□□□□ -0.63
DHFR2-203ENST00000461173 TYW1BQ6NUM6 668 aa11.14□□□□□ -0.63
DHFR2-203ENST00000461173 PPFIBP1Q86W92 1011 aa11.14□□□□□ -0.63
DHFR2-203ENST00000461173 CCDC24Q8N4L8 307 aa11.14□□□□□ -0.63
DHFR2-203ENST00000461173 IGSF22Q8N9C0 903 aa11.14□□□□□ -0.63
DHFR2-203ENST00000461173 NOC3LQ8WTT2 800 aaKnown RBP11.14□□□□□ -0.63
DHFR2-203ENST00000461173 TUBB2BQ9BVA1 445 aa11.14□□□□□ -0.63
DHFR2-203ENST00000461173 C6orf50Q9HD87 102 aa11.14□□□□□ -0.63
DHFR2-203ENST00000461173 FOCADQ5VW36 1801 aa11.14□□□□□ -0.63
DHFR2-203ENST00000461173 A0A0U1RQG5 324 aaPredicted RBP11.14□□□□□ -0.63
DHFR2-203ENST00000461173 KLRF2D3W0D1 207 aa11.14□□□□□ -0.63
DHFR2-203ENST00000461173 RHOBTB3O94955 611 aa11.14□□□□□ -0.63
DHFR2-203ENST00000461173 NAALADL2Q58DX5 795 aa11.14□□□□□ -0.63
DHFR2-203ENST00000461173 RRAGBQ5VZM2 374 aa11.14□□□□□ -0.63
DHFR2-203ENST00000461173 MAPKAPK5Q8IW41 473 aa11.14□□□□□ -0.63
DHFR2-203ENST00000461173 SP8Q8IXZ3 490 aa11.14□□□□□ -0.63
DHFR2-203ENST00000461173 TBC1D16Q8TBP0 767 aa11.14□□□□□ -0.63
DHFR2-203ENST00000461173 RRP36Q96EU6 259 aaKnown RBP11.14□□□□□ -0.63
DHFR2-203ENST00000461173 RIOX1Q9H6W3 641 aa11.14□□□□□ -0.63
DHFR2-203ENST00000461173 LRRC4BQ9NT99 713 aa11.14□□□□□ -0.63
DHFR2-203ENST00000461173 DDX41Q9UJV9 622 aaKnown RBP11.14□□□□□ -0.63
DHFR2-203ENST00000461173 A0A1W2PQC6 194 aa11.13□□□□□ -0.63
DHFR2-203ENST00000461173 MFAP3LO75121 409 aa11.13□□□□□ -0.63
DHFR2-203ENST00000461173 CCDC175P0C221 793 aa11.13□□□□□ -0.63
DHFR2-203ENST00000461173 UBA7P41226 1012 aa11.13□□□□□ -0.63
DHFR2-203ENST00000461173 GABPAQ06546 454 aa11.13□□□□□ -0.63
DHFR2-203ENST00000461173 STIM1Q13586 685 aa11.13□□□□□ -0.63
DHFR2-203ENST00000461173 NONOQ15233 471 aaKnown RBP eCLIP11.13□□□□□ -0.63
DHFR2-203ENST00000461173 ASPRV1Q53RT3 343 aa11.13□□□□□ -0.63
DHFR2-203ENST00000461173 MFSD14BQ5SR56 506 aa11.13□□□□□ -0.63
DHFR2-203ENST00000461173 PPP1R18Q6NYC8 613 aa11.13□□□□□ -0.63
DHFR2-203ENST00000461173 RASGRP2Q7LDG7 609 aa11.13□□□□□ -0.63
DHFR2-203ENST00000461173 ADSSL1Q8N142 457 aa11.13□□□□□ -0.63
DHFR2-203ENST00000461173 GPKOWQ92917 476 aaPredicted RBP eCLIP11.13□□□□□ -0.63
DHFR2-203ENST00000461173 COA1Q9GZY4 146 aa11.13□□□□□ -0.63
DHFR2-203ENST00000461173 THAP9Q9H5L6 903 aa11.13□□□□□ -0.63
DHFR2-203ENST00000461173 TRPC5Q9UL62 973 aaPredicted RBP11.13□□□□□ -0.63
DHFR2-203ENST00000461173 STX8Q9UNK0 236 aa11.13□□□□□ -0.63
DHFR2-203ENST00000461173 JAG2Q9Y219 1238 aa11.13□□□□□ -0.63
DHFR2-203ENST00000461173 QSER1Q2KHR3 1735 aa11.12□□□□□ -0.63
DHFR2-203ENST00000461173 EFCAB8A8MWE9 144 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms