RNA–Protein interactions for RNA: ENST00000460485.1

ERCC3-205, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 3

Gene ERCC3, Length 815 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-205ENST00000460485 GRIK5Q16478 980 aa16.1■□□□□ 0.17
ERCC3-205ENST00000460485 ASPRV1Q53RT3 343 aa16.1■□□□□ 0.17
ERCC3-205ENST00000460485 TTC38Q5R3I4 469 aa16.1■□□□□ 0.17
ERCC3-205ENST00000460485 CNNM3Q8NE01 707 aa16.1■□□□□ 0.17
ERCC3-205ENST00000460485 CCDC17Q96LX7 622 aa16.1■□□□□ 0.17
ERCC3-205ENST00000460485 TMEM47Q9BQJ4 181 aa16.1■□□□□ 0.17
ERCC3-205ENST00000460485 TRIM5Q9C035 493 aa16.1■□□□□ 0.17
ERCC3-205ENST00000460485 CABP5Q9NP86 173 aa16.1■□□□□ 0.17
ERCC3-205ENST00000460485 ADARB2Q9NS39 739 aaKnown RBP16.1■□□□□ 0.17
ERCC3-205ENST00000460485 PGAP2Q9UHJ9 254 aa16.1■□□□□ 0.17
ERCC3-205ENST00000460485 MAD2L2Q9UI95 211 aa16.1■□□□□ 0.17
ERCC3-205ENST00000460485 PCDHA4Q9UN74 947 aa16.1■□□□□ 0.17
ERCC3-205ENST00000460485 TTF2Q9UNY4 1162 aaKnown RBP16.1■□□□□ 0.17
ERCC3-205ENST00000460485 ESYT2A0FGR8 921 aa16.09■□□□□ 0.17
ERCC3-205ENST00000460485 CELF2O95319 508 aaKnown RBP16.09■□□□□ 0.17
ERCC3-205ENST00000460485 PARP1P09874 1014 aaKnown RBP16.09■□□□□ 0.17
ERCC3-205ENST00000460485 PLCD1P51178 756 aa16.09■□□□□ 0.17
ERCC3-205ENST00000460485 TERF1P54274 439 aa16.09■□□□□ 0.17
ERCC3-205ENST00000460485 ATP2C1P98194 919 aaPredicted RBP16.09■□□□□ 0.17
ERCC3-205ENST00000460485 GABPAQ06546 454 aa16.09■□□□□ 0.17
ERCC3-205ENST00000460485 NOGQ13253 232 aa16.09■□□□□ 0.17
ERCC3-205ENST00000460485 NR5A1Q13285 461 aa16.09■□□□□ 0.17
ERCC3-205ENST00000460485 PPP1R18Q6NYC8 613 aa16.09■□□□□ 0.17
ERCC3-205ENST00000460485 BLIDQ8IZY5 108 aa16.09■□□□□ 0.17
ERCC3-205ENST00000460485 CCDC82Q8N4S0 544 aa16.09■□□□□ 0.17
ERCC3-205ENST00000460485 DYNLL2Q96FJ2 89 aa16.09■□□□□ 0.17
ERCC3-205ENST00000460485 ZDHHC15Q96MV8 337 aa16.09■□□□□ 0.17
ERCC3-205ENST00000460485 VPS33BQ9H267 617 aa16.09■□□□□ 0.17
ERCC3-205ENST00000460485 STX8Q9UNK0 236 aa16.09■□□□□ 0.17
ERCC3-205ENST00000460485 SCN9AQ15858 1988 aa16.08■□□□□ 0.16
ERCC3-205ENST00000460485 SMIM22K7EJ46 135 aa16.08■□□□□ 0.16
ERCC3-205ENST00000460485 NMT2O60551 498 aa16.08■□□□□ 0.16
ERCC3-205ENST00000460485 SMC2O95347 1197 aa16.08■□□□□ 0.16
ERCC3-205ENST00000460485 GNA11P29992 359 aa16.08■□□□□ 0.16
ERCC3-205ENST00000460485 NT5DC1Q5TFE4 455 aa16.08■□□□□ 0.16
ERCC3-205ENST00000460485 CIAPIN1Q6FI81 312 aa16.08■□□□□ 0.16
ERCC3-205ENST00000460485 C11orf57Q6ZUT1 292 aaPredicted RBP16.08■□□□□ 0.16
ERCC3-205ENST00000460485 CMTR1Q8N1G2 835 aaKnown RBP16.08■□□□□ 0.16
ERCC3-205ENST00000460485 ZC3H15Q8WU90 426 aaKnown RBP16.08■□□□□ 0.16
ERCC3-205ENST00000460485 RTN4Q9NQC3 1192 aaKnown RBP16.08■□□□□ 0.16
ERCC3-205ENST00000460485 BARHL2Q9NY43 387 aa16.08■□□□□ 0.16
ERCC3-205ENST00000460485 SEC63Q9UGP8 760 aaKnown RBP16.08■□□□□ 0.16
ERCC3-205ENST00000460485 SERPINB13Q9UIV8 391 aa16.08■□□□□ 0.16
ERCC3-205ENST00000460485 PCDHB6Q9Y5E3 794 aa16.08■□□□□ 0.16
ERCC3-205ENST00000460485 SIPA1L1O43166 1804 aa16.08■□□□□ 0.16
ERCC3-205ENST00000460485 BAZ2BQ9UIF8 2168 aaKnown RBP16.07■□□□□ 0.16
ERCC3-205ENST00000460485 PLCB2Q00722 1185 aa16.07■□□□□ 0.16
ERCC3-205ENST00000460485 NPY5RQ15761 445 aa16.07■□□□□ 0.16
ERCC3-205ENST00000460485 LARGE2Q8N3Y3 721 aa16.07■□□□□ 0.16
ERCC3-205ENST00000460485 OXER1Q8TDS5 423 aa16.07■□□□□ 0.16
ERCC3-205ENST00000460485 PIBF1Q8WXW3 757 aa16.07■□□□□ 0.16
ERCC3-205ENST00000460485 RRP36Q96EU6 259 aaKnown RBP16.07■□□□□ 0.16
ERCC3-205ENST00000460485 OSBPL5Q9H0X9 879 aaPredicted RBP16.07■□□□□ 0.16
ERCC3-205ENST00000460485 GPRC5DQ9NZD1 345 aa16.07■□□□□ 0.16
ERCC3-205ENST00000460485 SAP30BPQ9UHR5 308 aaKnown RBP16.07■□□□□ 0.16
ERCC3-205ENST00000460485 SERPINA10Q9UK55 444 aa16.07■□□□□ 0.16
ERCC3-205ENST00000460485 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP16.07■□□□□ 0.16
ERCC3-205ENST00000460485 IGKV6D-41A0A0C4DH26 115 aa16.06■□□□□ 0.16
ERCC3-205ENST00000460485 CCDC194A0A1B0GVG4 234 aa16.06■□□□□ 0.16
ERCC3-205ENST00000460485 UBE2Q2LH0YL09 131 aa16.06■□□□□ 0.16
ERCC3-205ENST00000460485 RIMBP2O15034 1052 aa16.06■□□□□ 0.16
ERCC3-205ENST00000460485 CBFA2T2O43439 604 aa16.06■□□□□ 0.16
ERCC3-205ENST00000460485 OFD1O75665 1012 aa16.06■□□□□ 0.16
ERCC3-205ENST00000460485 LONP1P36776 959 aaKnown RBP16.06■□□□□ 0.16
ERCC3-205ENST00000460485 TXLNAP40222 546 aa16.06■□□□□ 0.16
ERCC3-205ENST00000460485 GSDMDP57764 484 aa16.06■□□□□ 0.16
ERCC3-205ENST00000460485 POSTNQ15063 836 aa16.06■□□□□ 0.16
ERCC3-205ENST00000460485 KRT25Q7Z3Z0 450 aa16.06■□□□□ 0.16
ERCC3-205ENST00000460485 TEX2Q8IWB9 1127 aa16.06■□□□□ 0.16
ERCC3-205ENST00000460485 DHX40Q8IX18 779 aaKnown RBP16.06■□□□□ 0.16
ERCC3-205ENST00000460485 MLKLQ8NB16 471 aa16.06■□□□□ 0.16
ERCC3-205ENST00000460485 IDI2Q9BXS1 227 aa16.06■□□□□ 0.16
ERCC3-205ENST00000460485 SAGE1Q9NXZ1 904 aa16.06■□□□□ 0.16
ERCC3-205ENST00000460485 IMPACTQ9P2X3 320 aa16.06■□□□□ 0.16
ERCC3-205ENST00000460485 SYNPO2Q9UMS6 1093 aa16.06■□□□□ 0.16
ERCC3-205ENST00000460485 COL4A5P29400 1685 aa16.05■□□□□ 0.16
ERCC3-205ENST00000460485 USP17L3A6NCW0 530 aa16.05■□□□□ 0.16
ERCC3-205ENST00000460485 USP17L4A6NCW7 530 aa16.05■□□□□ 0.16
ERCC3-205ENST00000460485 KLRF2D3W0D1 207 aa16.05■□□□□ 0.16
ERCC3-205ENST00000460485 TTLL1O95922 423 aa16.05■□□□□ 0.16
ERCC3-205ENST00000460485 SNHG28P0DPA3 235 aa16.05■□□□□ 0.16
ERCC3-205ENST00000460485 PRPHP41219 470 aa16.05■□□□□ 0.16
ERCC3-205ENST00000460485 CRKP46108 304 aa16.05■□□□□ 0.16
ERCC3-205ENST00000460485 GPATCH4Q5T3I0 446 aaKnown RBP16.05■□□□□ 0.16
ERCC3-205ENST00000460485 USP17L1Q7RTZ2 530 aa16.05■□□□□ 0.16
ERCC3-205ENST00000460485 CERS5Q8N5B7 392 aa16.05■□□□□ 0.16
ERCC3-205ENST00000460485 FBXW7Q969H0 707 aa16.05■□□□□ 0.16
ERCC3-205ENST00000460485 GTPBP4Q9BZE4 634 aaKnown RBP16.05■□□□□ 0.16
ERCC3-205ENST00000460485 ZMYND12Q9H0C1 365 aa16.05■□□□□ 0.16
ERCC3-205ENST00000460485 GLT8D2Q9H1C3 349 aa16.05■□□□□ 0.16
ERCC3-205ENST00000460485 C6orf50Q9HD87 102 aa16.05■□□□□ 0.16
ERCC3-205ENST00000460485 USP40Q9NVE5 1235 aa16.05■□□□□ 0.16
ERCC3-205ENST00000460485 MTMR4Q9NYA4 1195 aa16.05■□□□□ 0.16
ERCC3-205ENST00000460485 EIF2AK3Q9NZJ5 1116 aaKnown RBP16.05■□□□□ 0.16
ERCC3-205ENST00000460485 NRDCO43847 1150 aa16.04■□□□□ 0.16
ERCC3-205ENST00000460485 MYL1P05976 194 aa16.04■□□□□ 0.16
ERCC3-205ENST00000460485 MYL5Q02045 173 aa16.04■□□□□ 0.16
ERCC3-205ENST00000460485 DRC7Q8IY82 874 aa16.04■□□□□ 0.16
ERCC3-205ENST00000460485 NIM1KQ8IY84 436 aa16.04■□□□□ 0.16
ERCC3-205ENST00000460485 AOPEPQ8N6M6 819 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms