RNA–Protein interactions for RNA: ENST00000460483.5

SMNDC1-203, Transcript of survival motor neuron domain containing 1, humanhuman

TSL 3

Gene SMNDC1, Length 753 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-203ENST00000460483 TM4SF4P48230 202 aa12.82□□□□□ -0.36
SMNDC1-203ENST00000460483 GCLCP48506 637 aaPredicted RBP12.82□□□□□ -0.36
SMNDC1-203ENST00000460483 AKAP17AQ02040 695 aaKnown RBP12.82□□□□□ -0.36
SMNDC1-203ENST00000460483 TROAPQ12815 778 aa12.82□□□□□ -0.36
SMNDC1-203ENST00000460483 RTN1Q16799 776 aa12.82□□□□□ -0.36
SMNDC1-203ENST00000460483 CYP4F22Q6NT55 531 aa12.82□□□□□ -0.36
SMNDC1-203ENST00000460483 APOA5Q6Q788 366 aa12.82□□□□□ -0.36
SMNDC1-203ENST00000460483 SIAH1Q8IUQ4 282 aa12.82□□□□□ -0.36
SMNDC1-203ENST00000460483 MS4A4AQ96JQ5 239 aa12.82□□□□□ -0.36
SMNDC1-203ENST00000460483 LRRC2Q9BYS8 371 aa12.82□□□□□ -0.36
SMNDC1-203ENST00000460483 RPAP3Q9H6T3 665 aaPredicted RBP12.82□□□□□ -0.36
SMNDC1-203ENST00000460483 EMILIN3Q9NT22 766 aa12.82□□□□□ -0.36
SMNDC1-203ENST00000460483 GOLGA8AA7E2F4 631 aa12.81□□□□□ -0.36
SMNDC1-203ENST00000460483 ZBED4O75132 1171 aa12.81□□□□□ -0.36
SMNDC1-203ENST00000460483 FLOT1O75955 427 aa12.81□□□□□ -0.36
SMNDC1-203ENST00000460483 SNHG28P0DPA3 235 aa12.81□□□□□ -0.36
SMNDC1-203ENST00000460483 AK2P54819 239 aa12.81□□□□□ -0.36
SMNDC1-203ENST00000460483 KIF23Q02241 960 aaPredicted RBP12.81□□□□□ -0.36
SMNDC1-203ENST00000460483 ZNF543Q08ER8 600 aa12.81□□□□□ -0.36
SMNDC1-203ENST00000460483 MKRN3Q13064 507 aaKnown RBP12.81□□□□□ -0.36
SMNDC1-203ENST00000460483 MICU3Q86XE3 530 aa12.81□□□□□ -0.36
SMNDC1-203ENST00000460483 HSCBQ8IWL3 235 aa12.81□□□□□ -0.36
SMNDC1-203ENST00000460483 TRIM22Q8IYM9 498 aa12.81□□□□□ -0.36
SMNDC1-203ENST00000460483 SPICE1Q8N0Z3 855 aa12.81□□□□□ -0.36
SMNDC1-203ENST00000460483 TCEANC2Q96MN5 208 aa12.81□□□□□ -0.36
SMNDC1-203ENST00000460483 SLF1Q9BQI6 1058 aa12.81□□□□□ -0.36
SMNDC1-203ENST00000460483 ZFYVE28Q9HCC9 887 aa12.81□□□□□ -0.36
SMNDC1-203ENST00000460483 DAXXQ9UER7 740 aaPredicted RBP12.81□□□□□ -0.36
SMNDC1-203ENST00000460483 SEC63Q9UGP8 760 aaKnown RBP12.81□□□□□ -0.36
SMNDC1-203ENST00000460483 MTMR7Q9Y216 660 aa12.81□□□□□ -0.36
SMNDC1-203ENST00000460483 BAZ2AQ9UIF9 1905 aaKnown RBP12.8□□□□□ -0.36
SMNDC1-203ENST00000460483 FAM155AB1AL88 458 aaPredicted RBP12.8□□□□□ -0.36
SMNDC1-203ENST00000460483 TMEM232C9JQI7 657 aa12.8□□□□□ -0.36
SMNDC1-203ENST00000460483 PDHXO00330 501 aa12.8□□□□□ -0.36
SMNDC1-203ENST00000460483 CPA1P15085 419 aa12.8□□□□□ -0.36
SMNDC1-203ENST00000460483 COPB2P35606 906 aa12.8□□□□□ -0.36
SMNDC1-203ENST00000460483 ANP32AP39687 249 aaKnown RBP12.8□□□□□ -0.36
SMNDC1-203ENST00000460483 CCNA1P78396 465 aa12.8□□□□□ -0.36
SMNDC1-203ENST00000460483 APOBRQ0VD83 1088 aa12.8□□□□□ -0.36
SMNDC1-203ENST00000460483 GRM4Q14833 912 aa12.8□□□□□ -0.36
SMNDC1-203ENST00000460483 ARHGEF6Q15052 776 aa12.8□□□□□ -0.36
SMNDC1-203ENST00000460483 FAM83BQ5T0W9 1011 aa12.8□□□□□ -0.36
SMNDC1-203ENST00000460483 CATSPERGQ6ZRH7 1159 aa12.8□□□□□ -0.36
SMNDC1-203ENST00000460483 CCDC84Q86UT8 332 aaPredicted RBP12.8□□□□□ -0.36
SMNDC1-203ENST00000460483 CLEC10AQ8IUN9 316 aa12.8□□□□□ -0.36
SMNDC1-203ENST00000460483 CCAR1Q8IX12 1150 aaKnown RBP12.8□□□□□ -0.36
SMNDC1-203ENST00000460483 KIF2CQ99661 725 aa12.8□□□□□ -0.36
SMNDC1-203ENST00000460483 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.8□□□□□ -0.36
SMNDC1-203ENST00000460483 LAMA4Q16363 1823 aa12.8□□□□□ -0.36
SMNDC1-203ENST00000460483 CDK5RAP2Q96SN8 1893 aa12.8□□□□□ -0.36
SMNDC1-203ENST00000460483 PALM3A6NDB9 673 aaPredicted RBP12.79□□□□□ -0.36
SMNDC1-203ENST00000460483 KLRF2D3W0D1 207 aa12.79□□□□□ -0.36
SMNDC1-203ENST00000460483 XBP1P17861 261 aa12.79□□□□□ -0.36
SMNDC1-203ENST00000460483 PDIA3P30101 505 aaKnown RBP12.79□□□□□ -0.36
SMNDC1-203ENST00000460483 GJA5P36382 358 aa12.79□□□□□ -0.36
SMNDC1-203ENST00000460483 VEGFBP49765 207 aa12.79□□□□□ -0.36
SMNDC1-203ENST00000460483 TOB2Q14106 344 aaPredicted RBP12.79□□□□□ -0.36
SMNDC1-203ENST00000460483 SHROOM1Q2M3G4 852 aaPredicted RBP12.79□□□□□ -0.36
SMNDC1-203ENST00000460483 BTNL9Q6UXG8 535 aa12.79□□□□□ -0.36
SMNDC1-203ENST00000460483 BRI3BPQ8WY22 251 aa12.79□□□□□ -0.36
SMNDC1-203ENST00000460483 WASF1Q92558 559 aa12.79□□□□□ -0.36
SMNDC1-203ENST00000460483 SNX21Q969T3 373 aa12.79□□□□□ -0.36
SMNDC1-203ENST00000460483 RRP36Q96EU6 259 aaKnown RBP12.79□□□□□ -0.36
SMNDC1-203ENST00000460483 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.79□□□□□ -0.36
SMNDC1-203ENST00000460483 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.79□□□□□ -0.36
SMNDC1-203ENST00000460483 BTBD19C9JJ37 291 aa12.78□□□□□ -0.36
SMNDC1-203ENST00000460483 hCG_1984214I3L0E3 225 aa12.78□□□□□ -0.36
SMNDC1-203ENST00000460483 PFKFB2O60825 505 aa12.78□□□□□ -0.36
SMNDC1-203ENST00000460483 HSP90AA1P07900 732 aaKnown RBP12.78□□□□□ -0.36
SMNDC1-203ENST00000460483 PDIA4P13667 645 aaKnown RBP12.78□□□□□ -0.36
SMNDC1-203ENST00000460483 OAZ1P54368 228 aa12.78□□□□□ -0.36
SMNDC1-203ENST00000460483 TAF1CQ15572 869 aaPredicted RBP12.78□□□□□ -0.36
SMNDC1-203ENST00000460483 SYDE2Q5VT97 1194 aa12.78□□□□□ -0.36
SMNDC1-203ENST00000460483 LBX2Q6XYB7 198 aa12.78□□□□□ -0.36
SMNDC1-203ENST00000460483 KCTD1Q719H9 257 aa12.78□□□□□ -0.36
SMNDC1-203ENST00000460483 TEX2Q8IWB9 1127 aa12.78□□□□□ -0.36
SMNDC1-203ENST00000460483 ZNF713Q8N859 430 aaPredicted RBP12.78□□□□□ -0.36
SMNDC1-203ENST00000460483 LLPHQ9BRT6 129 aaKnown RBP12.78□□□□□ -0.36
SMNDC1-203ENST00000460483 SPZ1Q9BXG8 430 aa12.78□□□□□ -0.36
SMNDC1-203ENST00000460483 GPCPD1Q9NPB8 672 aa12.78□□□□□ -0.36
SMNDC1-203ENST00000460483 SAGE1Q9NXZ1 904 aa12.78□□□□□ -0.36
SMNDC1-203ENST00000460483 PPP1R9AQ9ULJ8 1098 aa12.78□□□□□ -0.36
SMNDC1-203ENST00000460483 TRPM7Q96QT4 1865 aa12.78□□□□□ -0.36
SMNDC1-203ENST00000460483 HMGN5P82970 282 aaKnown RBP12.77□□□□□ -0.37
SMNDC1-203ENST00000460483 FAM177A1Q8N128 213 aaPredicted RBP12.77□□□□□ -0.37
SMNDC1-203ENST00000460483 CCDC12Q8WUD4 166 aaPredicted RBP12.77□□□□□ -0.37
SMNDC1-203ENST00000460483 KIFC2Q96AC6 838 aa12.77□□□□□ -0.37
SMNDC1-203ENST00000460483 MAF1Q9H063 256 aa12.77□□□□□ -0.37
SMNDC1-203ENST00000460483 ASCC2Q9H1I8 757 aaPredicted RBP12.77□□□□□ -0.37
SMNDC1-203ENST00000460483 MAD2L2Q9UI95 211 aa12.77□□□□□ -0.37
SMNDC1-203ENST00000460483 BRPF3Q9ULD4 1205 aa12.77□□□□□ -0.37
SMNDC1-203ENST00000460483 TPCN1Q9ULQ1 816 aa12.77□□□□□ -0.37
SMNDC1-203ENST00000460483 RABGAP1Q9Y3P9 1069 aa12.77□□□□□ -0.37
SMNDC1-203ENST00000460483 SIPA1L1O43166 1804 aa12.76□□□□□ -0.37
SMNDC1-203ENST00000460483 DOCK1Q14185 1865 aa12.76□□□□□ -0.37
SMNDC1-203ENST00000460483 POLR2AP24928 1970 aaKnown RBP12.76□□□□□ -0.37
SMNDC1-203ENST00000460483 K7ELQ4 463 aaPredicted RBP12.76□□□□□ -0.37
SMNDC1-203ENST00000460483 SLC25A27O95847 323 aa12.76□□□□□ -0.37
SMNDC1-203ENST00000460483 CHRM1P11229 460 aaPredicted RBP12.76□□□□□ -0.37
SMNDC1-203ENST00000460483 HERVK_113P62684 666 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 114.9 ms