RNA–Protein interactions for RNA: ENST00000460176.6

GARNL3-211, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 5

Gene GARNL3, Length 569 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-211ENST00000460176 GPATCH4Q5T3I0 446 aaKnown RBP11.95□□□□□ -0.5
GARNL3-211ENST00000460176 TTBK2Q6IQ55 1244 aa11.95□□□□□ -0.5
GARNL3-211ENST00000460176 SYNE3Q6ZMZ3 975 aa11.95□□□□□ -0.5
GARNL3-211ENST00000460176 NOL8Q76FK4 1167 aaKnown RBP11.95□□□□□ -0.5
GARNL3-211ENST00000460176 CCDC144CPQ8IYA2 1237 aa11.95□□□□□ -0.5
GARNL3-211ENST00000460176 STAG2Q8N3U4 1231 aa11.95□□□□□ -0.5
GARNL3-211ENST00000460176 NUP133Q8WUM0 1156 aa11.95□□□□□ -0.5
GARNL3-211ENST00000460176 ZNF274Q96GC6 653 aaPredicted RBP11.95□□□□□ -0.5
GARNL3-211ENST00000460176 TANGO6Q9C0B7 1094 aa11.95□□□□□ -0.5
GARNL3-211ENST00000460176 GPCPD1Q9NPB8 672 aa11.95□□□□□ -0.5
GARNL3-211ENST00000460176 FBXO28Q9NVF7 368 aa11.95□□□□□ -0.5
GARNL3-211ENST00000460176 MYPNQ86TC9 1320 aa11.94□□□□□ -0.5
GARNL3-211ENST00000460176 GOLGA8AA7E2F4 631 aa11.94□□□□□ -0.5
GARNL3-211ENST00000460176 TMEM232C9JQI7 657 aa11.94□□□□□ -0.5
GARNL3-211ENST00000460176 ST18O60284 1047 aa11.94□□□□□ -0.5
GARNL3-211ENST00000460176 PLA2G6O60733 806 aa11.94□□□□□ -0.5
GARNL3-211ENST00000460176 POTEEQ6S8J3 1075 aa11.94□□□□□ -0.5
GARNL3-211ENST00000460176 BTNL9Q6UXG8 535 aa11.94□□□□□ -0.5
GARNL3-211ENST00000460176 FANCBQ8NB91 859 aa11.94□□□□□ -0.5
GARNL3-211ENST00000460176 CTCFLQ8NI51 663 aaPredicted RBP11.94□□□□□ -0.5
GARNL3-211ENST00000460176 ASCC2Q9H1I8 757 aaPredicted RBP11.94□□□□□ -0.5
GARNL3-211ENST00000460176 FAM217BQ9NTX9 383 aaPredicted RBP11.94□□□□□ -0.5
GARNL3-211ENST00000460176 FEM1BQ9UK73 627 aa11.94□□□□□ -0.5
GARNL3-211ENST00000460176 PPP1R9AQ9ULJ8 1098 aa11.94□□□□□ -0.5
GARNL3-211ENST00000460176 NAP1L2Q9ULW6 460 aaPredicted RBP11.94□□□□□ -0.5
GARNL3-211ENST00000460176 LIMCH1Q9UPQ0 1083 aa11.94□□□□□ -0.5
GARNL3-211ENST00000460176 STK24Q9Y6E0 443 aa11.94□□□□□ -0.5
GARNL3-211ENST00000460176 MYH6P13533 1939 aa11.94□□□□□ -0.5
GARNL3-211ENST00000460176 ADGRA2Q96PE1 1338 aa11.93□□□□□ -0.5
GARNL3-211ENST00000460176 SPDYE16A6NNV3 312 aaPredicted RBP11.93□□□□□ -0.5
GARNL3-211ENST00000460176 KLRF2D3W0D1 207 aa11.93□□□□□ -0.5
GARNL3-211ENST00000460176 PFKFB2O60825 505 aa11.93□□□□□ -0.5
GARNL3-211ENST00000460176 FLOT1O75955 427 aa11.93□□□□□ -0.5
GARNL3-211ENST00000460176 PLEKHA8P1O95397 391 aa11.93□□□□□ -0.5
GARNL3-211ENST00000460176 CYP2C8P10632 490 aa11.93□□□□□ -0.5
GARNL3-211ENST00000460176 OSBPP22059 807 aa11.93□□□□□ -0.5
GARNL3-211ENST00000460176 CDC27P30260 824 aa11.93□□□□□ -0.5
GARNL3-211ENST00000460176 SLC16A2P36021 539 aa11.93□□□□□ -0.5
GARNL3-211ENST00000460176 METAP2P50579 478 aaKnown RBP eCLIP11.93□□□□□ -0.5
GARNL3-211ENST00000460176 FXR2P51116 673 aaKnown RBP eCLIP11.93□□□□□ -0.5
GARNL3-211ENST00000460176 STAT2P52630 851 aa11.93□□□□□ -0.5
GARNL3-211ENST00000460176 IRX3P78415 501 aaPredicted RBP11.93□□□□□ -0.5
GARNL3-211ENST00000460176 COG2Q14746 738 aa11.93□□□□□ -0.5
GARNL3-211ENST00000460176 ME3Q16798 604 aa11.93□□□□□ -0.5
GARNL3-211ENST00000460176 RTN1Q16799 776 aa11.93□□□□□ -0.5
GARNL3-211ENST00000460176 SLC35G1Q2M3R5 365 aa11.93□□□□□ -0.5
GARNL3-211ENST00000460176 TPRNQ4KMQ1 711 aa11.93□□□□□ -0.5
GARNL3-211ENST00000460176 OTUD7BQ6GQQ9 843 aa11.93□□□□□ -0.5
GARNL3-211ENST00000460176 NBPF11Q86T75 865 aa11.93□□□□□ -0.5
GARNL3-211ENST00000460176 FAM160B2Q86V87 743 aa11.93□□□□□ -0.5
GARNL3-211ENST00000460176 P2RX7Q99572 595 aaKnown RBP11.93□□□□□ -0.5
GARNL3-211ENST00000460176 SLF1Q9BQI6 1058 aa11.93□□□□□ -0.5
GARNL3-211ENST00000460176 CPVLQ9H3G5 476 aa11.93□□□□□ -0.5
GARNL3-211ENST00000460176 PNMA3Q9UL41 463 aa11.93□□□□□ -0.5
GARNL3-211ENST00000460176 PRR12Q9ULL5 1215 aa11.93□□□□□ -0.5
GARNL3-211ENST00000460176 ISY1Q9ULR0 285 aaKnown RBP11.93□□□□□ -0.5
GARNL3-211ENST00000460176 ADAMTS5Q9UNA0 930 aa11.93□□□□□ -0.5
GARNL3-211ENST00000460176 KIF5BP33176 963 aa11.92□□□□□ -0.5
GARNL3-211ENST00000460176 MCM2P49736 904 aa11.92□□□□□ -0.5
GARNL3-211ENST00000460176 HERVK_113P62684 666 aa11.92□□□□□ -0.5
GARNL3-211ENST00000460176 CCT2P78371 535 aaKnown RBP11.92□□□□□ -0.5
GARNL3-211ENST00000460176 ST3GAL1Q11201 340 aa11.92□□□□□ -0.5
GARNL3-211ENST00000460176 IKQ13123 557 aaPredicted RBP11.92□□□□□ -0.5
GARNL3-211ENST00000460176 STK3Q13188 491 aa11.92□□□□□ -0.5
GARNL3-211ENST00000460176 SYDE2Q5VT97 1194 aa11.92□□□□□ -0.5
GARNL3-211ENST00000460176 LBX2Q6XYB7 198 aa11.92□□□□□ -0.5
GARNL3-211ENST00000460176 TMTC3Q6ZXV5 915 aa11.92□□□□□ -0.5
GARNL3-211ENST00000460176 ZNF467Q7Z7K2 595 aaPredicted RBP11.92□□□□□ -0.5
GARNL3-211ENST00000460176 SRBD1Q8N5C6 995 aaKnown RBP11.92□□□□□ -0.5
GARNL3-211ENST00000460176 CHURC1Q8WUH1 139 aa11.92□□□□□ -0.5
GARNL3-211ENST00000460176 KIFC2Q96AC6 838 aa11.92□□□□□ -0.5
GARNL3-211ENST00000460176 ATG4CQ96DT6 458 aa11.92□□□□□ -0.5
GARNL3-211ENST00000460176 UBA5Q9GZZ9 404 aa11.92□□□□□ -0.5
GARNL3-211ENST00000460176 SLKQ9H2G2 1235 aaPredicted RBP11.92□□□□□ -0.5
GARNL3-211ENST00000460176 NCOA5Q9HCD5 579 aaKnown RBP11.92□□□□□ -0.5
GARNL3-211ENST00000460176 RBM28Q9NW13 759 aaKnown RBP11.92□□□□□ -0.5
GARNL3-211ENST00000460176 CNTNAP5Q8WYK1 1306 aa11.91□□□□□ -0.5
GARNL3-211ENST00000460176 CA12O43570 354 aa11.91□□□□□ -0.5
GARNL3-211ENST00000460176 CYTH3O43739 400 aa11.91□□□□□ -0.5
GARNL3-211ENST00000460176 ALDH1A1P00352 501 aa11.91□□□□□ -0.5
GARNL3-211ENST00000460176 SMARCA1P28370 1054 aa11.91□□□□□ -0.5
GARNL3-211ENST00000460176 ADD1P35611 737 aaKnown RBP11.91□□□□□ -0.5
GARNL3-211ENST00000460176 GNAQP50148 359 aa11.91□□□□□ -0.5
GARNL3-211ENST00000460176 FUT2Q10981 343 aa11.91□□□□□ -0.5
GARNL3-211ENST00000460176 SCRN1Q12765 414 aa11.91□□□□□ -0.5
GARNL3-211ENST00000460176 CRHR2Q13324 411 aa11.91□□□□□ -0.5
GARNL3-211ENST00000460176 PPP2R5BQ15173 497 aa11.91□□□□□ -0.5
GARNL3-211ENST00000460176 TAF1CQ15572 869 aaPredicted RBP11.91□□□□□ -0.5
GARNL3-211ENST00000460176 NTRK3Q16288 839 aa11.91□□□□□ -0.5
GARNL3-211ENST00000460176 ADGRF4Q8IZF3 695 aa11.91□□□□□ -0.5
GARNL3-211ENST00000460176 CMTR1Q8N1G2 835 aaKnown RBP11.91□□□□□ -0.5
GARNL3-211ENST00000460176 NECAB1Q8N987 351 aa11.91□□□□□ -0.5
GARNL3-211ENST00000460176 PRPF38AQ8NAV1 312 aaKnown RBP11.91□□□□□ -0.5
GARNL3-211ENST00000460176 REPS2Q8NFH8 660 aa11.91□□□□□ -0.5
GARNL3-211ENST00000460176 GTF3C6Q969F1 213 aa11.91□□□□□ -0.5
GARNL3-211ENST00000460176 SNX21Q969T3 373 aa11.91□□□□□ -0.5
GARNL3-211ENST00000460176 ZSCAN31Q96LW9 406 aaPredicted RBP11.91□□□□□ -0.5
GARNL3-211ENST00000460176 PARK7Q99497 189 aaKnown RBP11.91□□□□□ -0.5
GARNL3-211ENST00000460176 LZTS2Q9BRK4 669 aa11.91□□□□□ -0.5
GARNL3-211ENST00000460176 RIOX1Q9H6W3 641 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms