RNA–Protein interactions for RNA: ENST00000460125.1

NUCB1-208, Transcript of nucleobindin 1, humanhuman

TSL 2

Gene NUCB1, Length 528 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUCB1-208ENST00000460125 SNX27Q96L92 541 aa13.24□□□□□ -0.29
NUCB1-208ENST00000460125 API5Q9BZZ5 524 aaKnown RBP13.24□□□□□ -0.29
NUCB1-208ENST00000460125 TMX2Q9Y320 296 aa13.24□□□□□ -0.29
NUCB1-208ENST00000460125 E9PSI1 815 aa13.23□□□□□ -0.29
NUCB1-208ENST00000460125 SMIM22K7EJ46 135 aa13.23□□□□□ -0.29
NUCB1-208ENST00000460125 RFXAPO00287 272 aa13.23□□□□□ -0.29
NUCB1-208ENST00000460125 WDR46O15213 610 aaKnown RBP13.23□□□□□ -0.29
NUCB1-208ENST00000460125 GTPBP6O43824 516 aaPredicted RBP13.23□□□□□ -0.29
NUCB1-208ENST00000460125 POLR3DP05423 398 aaPredicted RBP13.23□□□□□ -0.29
NUCB1-208ENST00000460125 C6orf222P0C671 652 aaPredicted RBP13.23□□□□□ -0.29
NUCB1-208ENST00000460125 GJA9P57773 515 aa13.23□□□□□ -0.29
NUCB1-208ENST00000460125 TNNI3KQ59H18 835 aa13.23□□□□□ -0.29
NUCB1-208ENST00000460125 SAMD1Q6SPF0 538 aaPredicted RBP13.23□□□□□ -0.29
NUCB1-208ENST00000460125 TMEM179Q6ZVK1 233 aa13.23□□□□□ -0.29
NUCB1-208ENST00000460125 SPICE1Q8N0Z3 855 aa13.23□□□□□ -0.29
NUCB1-208ENST00000460125 UPF3AQ9H1J1 476 aaKnown RBP13.23□□□□□ -0.29
NUCB1-208ENST00000460125 VCPKMTQ9H867 229 aa13.23□□□□□ -0.29
NUCB1-208ENST00000460125 SPC25Q9HBM1 224 aa13.23□□□□□ -0.29
NUCB1-208ENST00000460125 ZHX1Q9UKY1 873 aaPredicted RBP13.23□□□□□ -0.29
NUCB1-208ENST00000460125 SLC4A7Q9Y6M7 1214 aa13.23□□□□□ -0.29
NUCB1-208ENST00000460125 FPGT-TNNI3KV9GXZ4 949 aa13.23□□□□□ -0.29
NUCB1-208ENST00000460125 GBF1Q92538 1859 aa13.23□□□□□ -0.29
NUCB1-208ENST00000460125 UMODL1Q5DID0 1318 aa13.22□□□□□ -0.29
NUCB1-208ENST00000460125 ADCY6O43306 1168 aa13.22□□□□□ -0.29
NUCB1-208ENST00000460125 IDH1O75874 414 aaKnown RBP13.22□□□□□ -0.29
NUCB1-208ENST00000460125 COPB2P35606 906 aa13.22□□□□□ -0.29
NUCB1-208ENST00000460125 MRE11P49959 708 aa13.22□□□□□ -0.29
NUCB1-208ENST00000460125 EVX2Q03828 476 aa13.22□□□□□ -0.29
NUCB1-208ENST00000460125 MAGEB6Q8N7X4 407 aa13.22□□□□□ -0.29
NUCB1-208ENST00000460125 SLC43A3Q8NBI5 491 aa13.22□□□□□ -0.29
NUCB1-208ENST00000460125 HLA-CQ95604 372 aa13.22□□□□□ -0.29
NUCB1-208ENST00000460125 HIPK3Q9H422 1215 aa13.22□□□□□ -0.29
NUCB1-208ENST00000460125 ZNF214Q9UL59 606 aaPredicted RBP13.22□□□□□ -0.29
NUCB1-208ENST00000460125 MYO5AQ9Y4I1 1855 aaKnown RBP13.21□□□□□ -0.29
NUCB1-208ENST00000460125 PNMA6EA0A0J9YXQ4 647 aa13.21□□□□□ -0.29
NUCB1-208ENST00000460125 VWA5AO00534 786 aa13.21□□□□□ -0.29
NUCB1-208ENST00000460125 CTAGE5O15320 804 aa13.21□□□□□ -0.29
NUCB1-208ENST00000460125 CCL23P55773 120 aa13.21□□□□□ -0.29
NUCB1-208ENST00000460125 NKX3-2P78367 333 aa13.21□□□□□ -0.29
NUCB1-208ENST00000460125 SLFN5Q08AF3 891 aa13.21□□□□□ -0.29
NUCB1-208ENST00000460125 ACVR2BQ13705 512 aa13.21□□□□□ -0.29
NUCB1-208ENST00000460125 GNASQ5JWF2 1037 aa13.21□□□□□ -0.29
NUCB1-208ENST00000460125 RPUSD2Q8IZ73 545 aaKnown RBP13.21□□□□□ -0.29
NUCB1-208ENST00000460125 REPS2Q8NFH8 660 aa13.21□□□□□ -0.29
NUCB1-208ENST00000460125 VWCEQ96DN2 955 aa13.21□□□□□ -0.29
NUCB1-208ENST00000460125 RIOK1Q9BRS2 568 aaKnown RBP13.21□□□□□ -0.29
NUCB1-208ENST00000460125 SH2D4AQ9H788 454 aa13.21□□□□□ -0.29
NUCB1-208ENST00000460125 ARHGEF10LQ9HCE6 1279 aa13.21□□□□□ -0.29
NUCB1-208ENST00000460125 CD320Q9NPF0 282 aa13.21□□□□□ -0.29
NUCB1-208ENST00000460125 FBXO28Q9NVF7 368 aa13.21□□□□□ -0.29
NUCB1-208ENST00000460125 PRRC2BQ5JSZ5 2229 aaKnown RBP13.21□□□□□ -0.29
NUCB1-208ENST00000460125 TRANK1O15050 2925 aa13.2□□□□□ -0.3
NUCB1-208ENST00000460125 LRRC37A2A6NM11 1700 aa13.2□□□□□ -0.3
NUCB1-208ENST00000460125 DNAJC25-GNG10A0A024R161 153 aa13.2□□□□□ -0.3
NUCB1-208ENST00000460125 PRR33A8MZF0 331 aa13.2□□□□□ -0.3
NUCB1-208ENST00000460125 ATP2A2P16615 1042 aaKnown RBP13.2□□□□□ -0.3
NUCB1-208ENST00000460125 TMEM67Q5HYA8 995 aa13.2□□□□□ -0.3
NUCB1-208ENST00000460125 KRT40Q6A162 431 aa13.2□□□□□ -0.3
NUCB1-208ENST00000460125 TMED8Q6PL24 325 aaPredicted RBP13.2□□□□□ -0.3
NUCB1-208ENST00000460125 ZNF467Q7Z7K2 595 aaPredicted RBP13.2□□□□□ -0.3
NUCB1-208ENST00000460125 CLEC10AQ8IUN9 316 aa13.2□□□□□ -0.3
NUCB1-208ENST00000460125 NOC4LQ9BVI4 516 aaKnown RBP13.2□□□□□ -0.3
NUCB1-208ENST00000460125 WNT8AQ9H1J5 351 aa13.2□□□□□ -0.3
NUCB1-208ENST00000460125 EPOPA6NHQ4 379 aa13.19□□□□□ -0.3
NUCB1-208ENST00000460125 ZBBXA8MT70 800 aa13.19□□□□□ -0.3
NUCB1-208ENST00000460125 CA3P07451 260 aa13.19□□□□□ -0.3
NUCB1-208ENST00000460125 ICA1Q05084 483 aa13.19□□□□□ -0.3
NUCB1-208ENST00000460125 CCDC144BQ3MJ40 725 aa13.19□□□□□ -0.3
NUCB1-208ENST00000460125 DDX11Q96FC9 970 aa13.19□□□□□ -0.3
NUCB1-208ENST00000460125 ABHD16BQ9H3Z7 469 aa13.19□□□□□ -0.3
NUCB1-208ENST00000460125 CERS4Q9HA82 394 aa13.19□□□□□ -0.3
NUCB1-208ENST00000460125 MCM9Q9NXL9 1143 aa13.19□□□□□ -0.3
NUCB1-208ENST00000460125 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.19□□□□□ -0.3
NUCB1-208ENST00000460125 PPP1R9AQ9ULJ8 1098 aa13.19□□□□□ -0.3
NUCB1-208ENST00000460125 PARP14Q460N5 1801 aa13.18□□□□□ -0.3
NUCB1-208ENST00000460125 GNAI2P04899 355 aa13.18□□□□□ -0.3
NUCB1-208ENST00000460125 AKR1B1P15121 316 aa13.18□□□□□ -0.3
NUCB1-208ENST00000460125 YTHDC1Q96MU7 727 aaKnown RBP13.18□□□□□ -0.3
NUCB1-208ENST00000460125 SWAP70Q9UH65 585 aa13.18□□□□□ -0.3
NUCB1-208ENST00000460125 DBNLQ9UJU6 430 aaKnown RBP13.18□□□□□ -0.3
NUCB1-208ENST00000460125 GRIN2DO15399 1336 aa13.17□□□□□ -0.3
NUCB1-208ENST00000460125 ZBED9Q6R2W3 1325 aa13.17□□□□□ -0.3
NUCB1-208ENST00000460125 CABYRO75952 493 aa13.17□□□□□ -0.3
NUCB1-208ENST00000460125 CENPBP07199 599 aaPredicted RBP13.17□□□□□ -0.3
NUCB1-208ENST00000460125 CYP2D6P10635 497 aa13.17□□□□□ -0.3
NUCB1-208ENST00000460125 HNRNPUQ00839 825 aaKnown RBP eCLIP13.17□□□□□ -0.3
NUCB1-208ENST00000460125 BEX3Q00994 111 aa13.17□□□□□ -0.3
NUCB1-208ENST00000460125 ITGA7Q13683 1181 aa13.17□□□□□ -0.3
NUCB1-208ENST00000460125 TTLL4Q14679 1199 aa13.17□□□□□ -0.3
NUCB1-208ENST00000460125 CXCL17Q6UXB2 119 aa13.17□□□□□ -0.3
NUCB1-208ENST00000460125 AGBL1Q96MI9 1066 aa13.17□□□□□ -0.3
NUCB1-208ENST00000460125 SEZ6LQ9BYH1 1024 aa13.17□□□□□ -0.3
NUCB1-208ENST00000460125 TRPV6Q9H1D0 765 aa13.17□□□□□ -0.3
NUCB1-208ENST00000460125 ANTXR1Q9H6X2 564 aa13.17□□□□□ -0.3
NUCB1-208ENST00000460125 RIPK3Q9Y572 518 aa13.17□□□□□ -0.3
NUCB1-208ENST00000460125 COL11A1P12107 1806 aaPredicted RBP13.17□□□□□ -0.3
NUCB1-208ENST00000460125 MAGEB6P1A0A0J9YX57 407 aa13.16□□□□□ -0.3
NUCB1-208ENST00000460125 B4GALT4O60513 344 aa13.16□□□□□ -0.3
NUCB1-208ENST00000460125 PFKMP08237 780 aa13.16□□□□□ -0.3
NUCB1-208ENST00000460125 EEF2P13639 858 aaKnown RBP13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms