RNA–Protein interactions for RNA: ENST00000458640.5

DDX39B-214, Transcript of DExD-box helicase 39B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX39B, Length 2,003 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-214ENST00000458640 ZNF396Q96N95 335 aaPredicted RBP12.71□□□□□ -0.38
DDX39B-214ENST00000458640 DSCC1Q9BVC3 393 aa12.71□□□□□ -0.38
DDX39B-214ENST00000458640 KIAA1468Q9P260 1216 aa12.71□□□□□ -0.38
DDX39B-214ENST00000458640 COL4A1P02462 1669 aa12.71□□□□□ -0.38
DDX39B-214ENST00000458640 CTAGE9A4FU28 777 aa12.7□□□□□ -0.38
DDX39B-214ENST00000458640 SLC27A2O14975 620 aa12.7□□□□□ -0.38
DDX39B-214ENST00000458640 ABCD1P33897 745 aa12.7□□□□□ -0.38
DDX39B-214ENST00000458640 GCLCP48506 637 aaPredicted RBP12.7□□□□□ -0.38
DDX39B-214ENST00000458640 GNGT1P63211 74 aa12.7□□□□□ -0.38
DDX39B-214ENST00000458640 TBX2Q13207 712 aaPredicted RBP12.7□□□□□ -0.38
DDX39B-214ENST00000458640 WASHC4Q2M389 1173 aa12.7□□□□□ -0.38
DDX39B-214ENST00000458640 PRR5LQ6MZQ0 368 aa12.7□□□□□ -0.38
DDX39B-214ENST00000458640 SLC30A9Q6PML9 568 aa12.7□□□□□ -0.38
DDX39B-214ENST00000458640 NCAPG2Q86XI2 1143 aa12.7□□□□□ -0.38
DDX39B-214ENST00000458640 CCDC13Q8IYE1 715 aa12.7□□□□□ -0.38
DDX39B-214ENST00000458640 RASEFQ8IZ41 740 aa12.7□□□□□ -0.38
DDX39B-214ENST00000458640 TRIM58Q8NG06 486 aa12.7□□□□□ -0.38
DDX39B-214ENST00000458640 PARD3BQ8TEW8 1205 aa12.7□□□□□ -0.38
DDX39B-214ENST00000458640 EBF2Q9HAK2 575 aa12.7□□□□□ -0.38
DDX39B-214ENST00000458640 RGL1Q9NZL6 768 aa12.7□□□□□ -0.38
DDX39B-214ENST00000458640 MINPP1Q9UNW1 487 aa12.7□□□□□ -0.38
DDX39B-214ENST00000458640 MAST3O60307 1309 aa12.7□□□□□ -0.38
DDX39B-214ENST00000458640 MYH15Q9Y2K3 1946 aa12.69□□□□□ -0.38
DDX39B-214ENST00000458640 A0A1W2PQ27 194 aa12.69□□□□□ -0.38
DDX39B-214ENST00000458640 A0A1W2PQ64 194 aa12.69□□□□□ -0.38
DDX39B-214ENST00000458640 A0A1W2PQD8 194 aa12.69□□□□□ -0.38
DDX39B-214ENST00000458640 SERPINB2P05120 415 aa12.69□□□□□ -0.38
DDX39B-214ENST00000458640 UBASH3AP57075 661 aa12.69□□□□□ -0.38
DDX39B-214ENST00000458640 ROR2Q01974 943 aaKnown RBP12.69□□□□□ -0.38
DDX39B-214ENST00000458640 CYB5D1Q6P9G0 228 aa12.69□□□□□ -0.38
DDX39B-214ENST00000458640 SPDYE1Q8NFV5 336 aaPredicted RBP12.69□□□□□ -0.38
DDX39B-214ENST00000458640 RPGRQ92834 1020 aaKnown RBP12.69□□□□□ -0.38
DDX39B-214ENST00000458640 ANKRD27Q96NW4 1050 aa12.69□□□□□ -0.38
DDX39B-214ENST00000458640 MOV10L1Q9BXT6 1211 aaKnown RBP12.69□□□□□ -0.38
DDX39B-214ENST00000458640 TM4SF1P30408 202 aa12.69□□□□□ -0.38
DDX39B-214ENST00000458640 NAP1L1P55209 391 aaKnown RBP12.69□□□□□ -0.38
DDX39B-214ENST00000458640 ST3GAL1Q11201 340 aa12.69□□□□□ -0.38
DDX39B-214ENST00000458640 MAP3K12Q12852 859 aa12.69□□□□□ -0.38
DDX39B-214ENST00000458640 GRAPQ13588 217 aa12.69□□□□□ -0.38
DDX39B-214ENST00000458640 NCAPHQ15003 741 aa12.69□□□□□ -0.38
DDX39B-214ENST00000458640 CWF19L1Q69YN2 538 aaKnown RBP12.69□□□□□ -0.38
DDX39B-214ENST00000458640 MIS18BP1Q6P0N0 1132 aa12.69□□□□□ -0.38
DDX39B-214ENST00000458640 PI16Q6UXB8 463 aa12.69□□□□□ -0.38
DDX39B-214ENST00000458640 FERMT3Q86UX7 667 aa12.69□□□□□ -0.38
DDX39B-214ENST00000458640 VPS37DQ86XT2 251 aa12.69□□□□□ -0.38
DDX39B-214ENST00000458640 FUKQ8N0W3 1084 aa12.69□□□□□ -0.38
DDX39B-214ENST00000458640 NLGN1Q8N2Q7 840 aa12.69□□□□□ -0.38
DDX39B-214ENST00000458640 GRAPLQ8TC17 118 aaPredicted RBP12.69□□□□□ -0.38
DDX39B-214ENST00000458640 AKT1S1Q96B36 256 aa12.69□□□□□ -0.38
DDX39B-214ENST00000458640 ALS2CR12Q96Q35 445 aa12.69□□□□□ -0.38
DDX39B-214ENST00000458640 SPAG5Q96R06 1193 aa12.69□□□□□ -0.38
DDX39B-214ENST00000458640 SEC62Q99442 399 aaKnown RBP12.69□□□□□ -0.38
DDX39B-214ENST00000458640 SUGCTQ9HAC7 445 aa12.69□□□□□ -0.38
DDX39B-214ENST00000458640 MYH13Q9UKX3 1938 aa12.69□□□□□ -0.38
DDX39B-214ENST00000458640 ZNF804BA4D1E1 1349 aa12.68□□□□□ -0.38
DDX39B-214ENST00000458640 IDH1O75874 414 aaKnown RBP12.68□□□□□ -0.38
DDX39B-214ENST00000458640 USP14P54578 494 aa12.68□□□□□ -0.38
DDX39B-214ENST00000458640 RASGRF1Q13972 1273 aa12.68□□□□□ -0.38
DDX39B-214ENST00000458640 KCNB1Q14721 858 aa12.68□□□□□ -0.38
DDX39B-214ENST00000458640 UBE3CQ15386 1083 aa12.68□□□□□ -0.38
DDX39B-214ENST00000458640 CCDC129Q6ZRS4 1044 aa12.68□□□□□ -0.38
DDX39B-214ENST00000458640 PCDHGA4Q9Y5G9 962 aa12.68□□□□□ -0.38
DDX39B-214ENST00000458640 SEMA3EO15041 775 aa12.67□□□□□ -0.38
DDX39B-214ENST00000458640 MGRN1O60291 552 aa12.67□□□□□ -0.38
DDX39B-214ENST00000458640 ADD2P35612 726 aa12.67□□□□□ -0.38
DDX39B-214ENST00000458640 GGCXP38435 758 aa12.67□□□□□ -0.38
DDX39B-214ENST00000458640 CCT2P78371 535 aaKnown RBP12.67□□□□□ -0.38
DDX39B-214ENST00000458640 ZNF827Q17R98 1081 aa12.67□□□□□ -0.38
DDX39B-214ENST00000458640 SLC9C2Q5TAH2 1124 aa12.67□□□□□ -0.38
DDX39B-214ENST00000458640 BLOC1S2Q6QNY1 142 aa12.67□□□□□ -0.38
DDX39B-214ENST00000458640 FAM177A1Q8N128 213 aaPredicted RBP12.67□□□□□ -0.38
DDX39B-214ENST00000458640 CCDC24Q8N4L8 307 aa12.67□□□□□ -0.38
DDX39B-214ENST00000458640 ZBTB10Q96DT7 871 aa12.67□□□□□ -0.38
DDX39B-214ENST00000458640 EPN3Q9H201 632 aa12.67□□□□□ -0.38
DDX39B-214ENST00000458640 RGS17Q9UGC6 210 aaPredicted RBP12.67□□□□□ -0.38
DDX39B-214ENST00000458640 PUF60Q9UHX1 559 aaKnown RBP12.67□□□□□ -0.38
DDX39B-214ENST00000458640 HOOK1Q9UJC3 728 aaKnown RBP12.67□□□□□ -0.38
DDX39B-214ENST00000458640 GOLGA6L10A6NI86 522 aa12.67□□□□□ -0.38
DDX39B-214ENST00000458640 SMNDC1O75940 238 aaKnown RBP eCLIP12.67□□□□□ -0.388e-9■■■■□ 24.6
DDX39B-214ENST00000458640 ZNF202O95125 648 aa12.67□□□□□ -0.38
DDX39B-214ENST00000458640 XRCC4Q13426 336 aa12.67□□□□□ -0.38
DDX39B-214ENST00000458640 RIPK1Q13546 671 aa12.67□□□□□ -0.38
DDX39B-214ENST00000458640 CRY2Q49AN0 593 aa12.67□□□□□ -0.38
DDX39B-214ENST00000458640 ALS2CLQ60I27 953 aa12.67□□□□□ -0.38
DDX39B-214ENST00000458640 NAA16Q6N069 864 aaPredicted RBP12.67□□□□□ -0.38
DDX39B-214ENST00000458640 NFXL1Q6ZNB6 911 aa12.67□□□□□ -0.38
DDX39B-214ENST00000458640 SPATA21Q7Z572 469 aa12.67□□□□□ -0.38
DDX39B-214ENST00000458640 C1orf131Q8NDD1 294 aaKnown RBP12.67□□□□□ -0.38
DDX39B-214ENST00000458640 MIPOL1Q8TD10 442 aa12.67□□□□□ -0.38
DDX39B-214ENST00000458640 EZH1Q92800 747 aaPredicted RBP12.67□□□□□ -0.38
DDX39B-214ENST00000458640 TRPC6Q9Y210 931 aa12.67□□□□□ -0.38
DDX39B-214ENST00000458640 EPB41L3Q9Y2J2 1087 aaPredicted RBP12.67□□□□□ -0.38
DDX39B-214ENST00000458640 NRXN2Q9P2S2 1712 aa12.67□□□□□ -0.38
DDX39B-214ENST00000458640 GOLGA6BA6NDN3 693 aa12.66□□□□□ -0.38
DDX39B-214ENST00000458640 M0R2C6 588 aa12.66□□□□□ -0.38
DDX39B-214ENST00000458640 POLRMTO00411 1230 aaKnown RBP12.66□□□□□ -0.38
DDX39B-214ENST00000458640 ABLIM1O14639 778 aa12.66□□□□□ -0.38
DDX39B-214ENST00000458640 LUC7L3O95232 432 aaKnown RBP12.66□□□□□ -0.38
DDX39B-214ENST00000458640 RHOXF2BP0C7M4 288 aa12.66□□□□□ -0.38
DDX39B-214ENST00000458640 HSPD1P10809 573 aaKnown RBP12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms