RNA–Protein interactions for RNA: ENST00000456816.5

LINC00887-204, long intergenic non-protein coding RNA 887, humanhuman

TSL 3 BASIC

Gene LINC00887, Length 796 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00887-204ENST00000456816 TMTC3Q6ZXV5 915 aa16.42■□□□□ 0.22
LINC00887-204ENST00000456816 IFNL1Q8IU54 200 aa16.42■□□□□ 0.22
LINC00887-204ENST00000456816 CCDC83Q8IWF9 413 aa16.42■□□□□ 0.22
LINC00887-204ENST00000456816 REM2Q8IYK8 340 aaPredicted RBP16.42■□□□□ 0.22
LINC00887-204ENST00000456816 FAM43AQ8N2R8 423 aa16.42■□□□□ 0.22
LINC00887-204ENST00000456816 SMCR8Q8TEV9 937 aaPredicted RBP16.42■□□□□ 0.22
LINC00887-204ENST00000456816 PIBF1Q8WXW3 757 aa16.42■□□□□ 0.22
LINC00887-204ENST00000456816 SNX21Q969T3 373 aa16.42■□□□□ 0.22
LINC00887-204ENST00000456816 TMX3Q96JJ7 454 aa16.42■□□□□ 0.22
LINC00887-204ENST00000456816 ZIC5Q96T25 663 aa16.42■□□□□ 0.22
LINC00887-204ENST00000456816 PARK7Q99497 189 aaKnown RBP16.42■□□□□ 0.22
LINC00887-204ENST00000456816 ASCC2Q9H1I8 757 aaPredicted RBP16.42■□□□□ 0.22
LINC00887-204ENST00000456816 CPVLQ9H3G5 476 aa16.42■□□□□ 0.22
LINC00887-204ENST00000456816 VAT1LQ9HCJ6 419 aa16.42■□□□□ 0.22
LINC00887-204ENST00000456816 TSHZ2Q9NRE2 1034 aa16.42■□□□□ 0.22
LINC00887-204ENST00000456816 FBXO28Q9NVF7 368 aa16.42■□□□□ 0.22
LINC00887-204ENST00000456816 LOC285556D6RIA3 1793 aa16.41■□□□□ 0.22
LINC00887-204ENST00000456816 TESPA1A2RU30 521 aaPredicted RBP16.41■□□□□ 0.22
LINC00887-204ENST00000456816 K7ELQ4 463 aaPredicted RBP16.41■□□□□ 0.22
LINC00887-204ENST00000456816 CDKL5O76039 1030 aa16.41■□□□□ 0.22
LINC00887-204ENST00000456816 HOXA7P31268 230 aaPredicted RBP16.41■□□□□ 0.22
LINC00887-204ENST00000456816 ADD1P35611 737 aaKnown RBP16.41■□□□□ 0.22
LINC00887-204ENST00000456816 MAP2K2P36507 400 aa16.41■□□□□ 0.22
LINC00887-204ENST00000456816 AKAP17AQ02040 695 aaKnown RBP16.41■□□□□ 0.22
LINC00887-204ENST00000456816 SCRN1Q12765 414 aa16.41■□□□□ 0.22
LINC00887-204ENST00000456816 BECN1Q14457 450 aa16.41■□□□□ 0.22
LINC00887-204ENST00000456816 COG2Q14746 738 aa16.41■□□□□ 0.22
LINC00887-204ENST00000456816 CMTR1Q8N1G2 835 aaKnown RBP16.41■□□□□ 0.22
LINC00887-204ENST00000456816 PRPF38AQ8NAV1 312 aaKnown RBP16.41■□□□□ 0.22
LINC00887-204ENST00000456816 GTF3C6Q969F1 213 aa16.41■□□□□ 0.22
LINC00887-204ENST00000456816 PTPN18Q99952 460 aa16.41■□□□□ 0.22
LINC00887-204ENST00000456816 HOXC10Q9NYD6 342 aa16.41■□□□□ 0.22
LINC00887-204ENST00000456816 PPP1R9AQ9ULJ8 1098 aa16.41■□□□□ 0.22
LINC00887-204ENST00000456816 SLC45A1Q9Y2W3 748 aa16.41■□□□□ 0.22
LINC00887-204ENST00000456816 NID2Q14112 1375 aa16.4■□□□□ 0.22
LINC00887-204ENST00000456816 IGF2BP3O00425 579 aaKnown RBP eCLIP16.4■□□□□ 0.22
LINC00887-204ENST00000456816 ZBED4O75132 1171 aa16.4■□□□□ 0.22
LINC00887-204ENST00000456816 HSP90AA1P07900 732 aaKnown RBP16.4■□□□□ 0.22
LINC00887-204ENST00000456816 TAF1CQ15572 869 aaPredicted RBP16.4■□□□□ 0.22
LINC00887-204ENST00000456816 HOMER1Q86YM7 354 aa16.4■□□□□ 0.22
LINC00887-204ENST00000456816 TRIM22Q8IYM9 498 aa16.4■□□□□ 0.22
LINC00887-204ENST00000456816 ATG4CQ96DT6 458 aa16.4■□□□□ 0.22
LINC00887-204ENST00000456816 SEC63Q9UGP8 760 aaKnown RBP16.4■□□□□ 0.22
LINC00887-204ENST00000456816 PRR12Q9ULL5 1215 aa16.4■□□□□ 0.22
LINC00887-204ENST00000456816 PTPRFP10586 1907 aa16.39■□□□□ 0.21
LINC00887-204ENST00000456816 PLA2G6O60733 806 aa16.39■□□□□ 0.21
LINC00887-204ENST00000456816 PPFIA3O75145 1194 aa16.39■□□□□ 0.21
LINC00887-204ENST00000456816 CYP2C8P10632 490 aa16.39■□□□□ 0.21
LINC00887-204ENST00000456816 DSG3P32926 999 aa16.39■□□□□ 0.21
LINC00887-204ENST00000456816 TM4SF4P48230 202 aa16.39■□□□□ 0.21
LINC00887-204ENST00000456816 SNAP25P60880 206 aa16.39■□□□□ 0.21
LINC00887-204ENST00000456816 BTNL9Q6UXG8 535 aa16.39■□□□□ 0.21
LINC00887-204ENST00000456816 ADGRF4Q8IZF3 695 aa16.39■□□□□ 0.21
LINC00887-204ENST00000456816 SRBD1Q8N5C6 995 aaKnown RBP16.39■□□□□ 0.21
LINC00887-204ENST00000456816 RRP36Q96EU6 259 aaKnown RBP16.39■□□□□ 0.21
LINC00887-204ENST00000456816 P2RX7Q99572 595 aaKnown RBP16.39■□□□□ 0.21
LINC00887-204ENST00000456816 PAGR1Q9BTK6 254 aa16.39■□□□□ 0.21
LINC00887-204ENST00000456816 SPZ1Q9BXG8 430 aa16.39■□□□□ 0.21
LINC00887-204ENST00000456816 ZCCHC17Q9NP64 241 aaKnown RBP16.39■□□□□ 0.21
LINC00887-204ENST00000456816 FAM217BQ9NTX9 383 aaPredicted RBP16.39■□□□□ 0.21
LINC00887-204ENST00000456816 MYPNQ86TC9 1320 aa16.39■□□□□ 0.21
LINC00887-204ENST00000456816 SPDYE16A6NNV3 312 aaPredicted RBP16.38■□□□□ 0.21
LINC00887-204ENST00000456816 ALDH1A1P00352 501 aa16.38■□□□□ 0.21
LINC00887-204ENST00000456816 SLC4A3P48751 1232 aa16.38■□□□□ 0.21
LINC00887-204ENST00000456816 HERVK_113P62684 666 aa16.38■□□□□ 0.21
LINC00887-204ENST00000456816 SSRP1Q08945 709 aaKnown RBP16.38■□□□□ 0.21
LINC00887-204ENST00000456816 PLS1Q14651 629 aa16.38■□□□□ 0.21
LINC00887-204ENST00000456816 CDC37Q16543 378 aaPredicted RBP16.38■□□□□ 0.21
LINC00887-204ENST00000456816 CCDC174Q6PII3 467 aa16.38■□□□□ 0.21
LINC00887-204ENST00000456816 NBPF11Q86T75 865 aa16.38■□□□□ 0.21
LINC00887-204ENST00000456816 GTF3C2Q8WUA4 911 aaPredicted RBP16.38■□□□□ 0.21
LINC00887-204ENST00000456816 PHKBQ93100 1093 aa16.38■□□□□ 0.21
LINC00887-204ENST00000456816 SLC26A6Q9BXS9 759 aa16.38■□□□□ 0.21
LINC00887-204ENST00000456816 ZFYVE28Q9HCC9 887 aa16.38■□□□□ 0.21
LINC00887-204ENST00000456816 DAXXQ9UER7 740 aaPredicted RBP16.38■□□□□ 0.21
LINC00887-204ENST00000456816 VWA5AO00534 786 aa16.37■□□□□ 0.21
LINC00887-204ENST00000456816 FDX1P10109 184 aa16.37■□□□□ 0.21
LINC00887-204ENST00000456816 IFNAR1P17181 557 aa16.37■□□□□ 0.21
LINC00887-204ENST00000456816 DNAJC5GQ8N7S2 189 aa16.37■□□□□ 0.21
LINC00887-204ENST00000456816 PIGSQ96S52 555 aa16.37■□□□□ 0.21
LINC00887-204ENST00000456816 JMJD4Q9H9V9 463 aa16.37■□□□□ 0.21
LINC00887-204ENST00000456816 CNTNAP5Q8WYK1 1306 aa16.37■□□□□ 0.21
LINC00887-204ENST00000456816 hCG_1642624A0A1W2PR95 340 aa16.36■□□□□ 0.21
LINC00887-204ENST00000456816 PTPDC1A2A3K4 754 aa16.36■□□□□ 0.21
LINC00887-204ENST00000456816 SMARCA1P28370 1054 aa16.36■□□□□ 0.21
LINC00887-204ENST00000456816 CPXCR1Q8N123 301 aa16.36■□□□□ 0.21
LINC00887-204ENST00000456816 MB21D1Q8N884 522 aa16.36■□□□□ 0.21
LINC00887-204ENST00000456816 DDX11Q96FC9 970 aa16.36■□□□□ 0.21
LINC00887-204ENST00000456816 BEGAINQ9BUH8 593 aa16.36■□□□□ 0.21
LINC00887-204ENST00000456816 RIOX1Q9H6W3 641 aa16.36■□□□□ 0.21
LINC00887-204ENST00000456816 FOXD4L1Q9NU39 408 aa16.36■□□□□ 0.21
LINC00887-204ENST00000456816 RBM27Q9P2N5 1060 aaKnown RBP16.36■□□□□ 0.21
LINC00887-204ENST00000456816 RBM19Q9Y4C8 960 aaKnown RBP16.36■□□□□ 0.21
LINC00887-204ENST00000456816 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.36■□□□□ 0.21
LINC00887-204ENST00000456816 V9GY48 417 aaPredicted RBP16.36■□□□□ 0.21
LINC00887-204ENST00000456816 ZBTB5O15062 677 aa16.35■□□□□ 0.21
LINC00887-204ENST00000456816 CYTH3O43739 400 aa16.35■□□□□ 0.21
LINC00887-204ENST00000456816 DTNBO60941 627 aa16.35■□□□□ 0.21
LINC00887-204ENST00000456816 FMNL1O95466 1100 aaPredicted RBP16.35■□□□□ 0.21
LINC00887-204ENST00000456816 GCLCP48506 637 aaPredicted RBP16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms