RNA–Protein interactions for RNA: ENST00000456563.1

FAM239A-203, Transcript of family with sequence similarity 239 member A, humanhuman

TSL 3

Gene FAM239A, Length 793 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM239A-203ENST00000456563 C17orf99Q6UX52 265 aa20.83■□□□□ 0.93
FAM239A-203ENST00000456563 MICU3Q86XE3 530 aa20.83■□□□□ 0.93
FAM239A-203ENST00000456563 STAG2Q8N3U4 1231 aa20.83■□□□□ 0.93
FAM239A-203ENST00000456563 MB21D1Q8N884 522 aa20.83■□□□□ 0.93
FAM239A-203ENST00000456563 FANCBQ8NB91 859 aa20.83■□□□□ 0.93
FAM239A-203ENST00000456563 KIFC2Q96AC6 838 aa20.83■□□□□ 0.93
FAM239A-203ENST00000456563 ZNF274Q96GC6 653 aaPredicted RBP20.83■□□□□ 0.93
FAM239A-203ENST00000456563 RLFQ13129 1914 aa20.82■□□□□ 0.92
FAM239A-203ENST00000456563 KLRF2D3W0D1 207 aa20.82■□□□□ 0.92
FAM239A-203ENST00000456563 BCRP11274 1271 aa20.82■□□□□ 0.92
FAM239A-203ENST00000456563 RXRAP19793 462 aa20.82■□□□□ 0.92
FAM239A-203ENST00000456563 SLC16A2P36021 539 aa20.82■□□□□ 0.92
FAM239A-203ENST00000456563 PPP2R5BQ15173 497 aa20.82■□□□□ 0.92
FAM239A-203ENST00000456563 NOM1Q5C9Z4 860 aaKnown RBP20.82■□□□□ 0.92
FAM239A-203ENST00000456563 SYDE2Q5VT97 1194 aa20.82■□□□□ 0.92
FAM239A-203ENST00000456563 RBPJLQ9UBG7 517 aa20.82■□□□□ 0.92
FAM239A-203ENST00000456563 MORF4L1Q9UBU8 362 aa20.82■□□□□ 0.92
FAM239A-203ENST00000456563 PRR12Q9ULL5 1215 aa20.82■□□□□ 0.92
FAM239A-203ENST00000456563 HPS5Q9UPZ3 1129 aa20.82■□□□□ 0.92
FAM239A-203ENST00000456563 RABGAP1Q9Y3P9 1069 aa20.82■□□□□ 0.92
FAM239A-203ENST00000456563 NID2Q14112 1375 aa20.82■□□□□ 0.92
FAM239A-203ENST00000456563 GOLGA8BA8MQT2 603 aa20.81■□□□□ 0.92
FAM239A-203ENST00000456563 VWA5AO00534 786 aa20.81■□□□□ 0.92
FAM239A-203ENST00000456563 PDIA3P30101 505 aaKnown RBP20.81■□□□□ 0.92
FAM239A-203ENST00000456563 GNAQP50148 359 aa20.81■□□□□ 0.92
FAM239A-203ENST00000456563 SAMD1Q6SPF0 538 aaPredicted RBP20.81■□□□□ 0.92
FAM239A-203ENST00000456563 RAB11FIP4Q86YS3 637 aa20.81■□□□□ 0.92
FAM239A-203ENST00000456563 UBA5Q9GZZ9 404 aa20.81■□□□□ 0.92
FAM239A-203ENST00000456563 RBM28Q9NW13 759 aaKnown RBP20.81■□□□□ 0.92
FAM239A-203ENST00000456563 CPA4Q9UI42 421 aa20.81■□□□□ 0.92
FAM239A-203ENST00000456563 NAP1L2Q9ULW6 460 aaPredicted RBP20.81■□□□□ 0.92
FAM239A-203ENST00000456563 GOLGA8AA7E2F4 631 aa20.8■□□□□ 0.92
FAM239A-203ENST00000456563 CNMDO75829 334 aa20.8■□□□□ 0.92
FAM239A-203ENST00000456563 SMARCA1P28370 1054 aa20.8■□□□□ 0.92
FAM239A-203ENST00000456563 METAP2P50579 478 aaKnown RBP eCLIP20.8■□□□□ 0.92
FAM239A-203ENST00000456563 RTN1Q16799 776 aa20.8■□□□□ 0.92
FAM239A-203ENST00000456563 FAM110CQ1W6H9 321 aa20.8■□□□□ 0.92
FAM239A-203ENST00000456563 CCDC144CPQ8IYA2 1237 aa20.8■□□□□ 0.92
FAM239A-203ENST00000456563 ANKRD13CQ8N6S4 541 aa20.8■□□□□ 0.92
FAM239A-203ENST00000456563 REPS2Q8NFH8 660 aa20.8■□□□□ 0.92
FAM239A-203ENST00000456563 LZTS2Q9BRK4 669 aa20.8■□□□□ 0.92
FAM239A-203ENST00000456563 LARP6Q9BRS8 491 aaKnown RBP20.8■□□□□ 0.92
FAM239A-203ENST00000456563 SLC38A10Q9HBR0 1119 aa20.8■□□□□ 0.92
FAM239A-203ENST00000456563 TXNRD2Q9NNW7 524 aa20.8■□□□□ 0.92
FAM239A-203ENST00000456563 FAM217BQ9NTX9 383 aaPredicted RBP20.8■□□□□ 0.92
FAM239A-203ENST00000456563 BTBD7Q9P203 1132 aa20.8■□□□□ 0.92
FAM239A-203ENST00000456563 TPCN1Q9ULQ1 816 aa20.8■□□□□ 0.92
FAM239A-203ENST00000456563 PARP14Q460N5 1801 aa20.8■□□□□ 0.92
FAM239A-203ENST00000456563 CEP350Q5VT06 3117 aa20.8■□□□□ 0.92
FAM239A-203ENST00000456563 ZBED4O75132 1171 aa20.79■□□□□ 0.92
FAM239A-203ENST00000456563 CPVLQ9H3G5 476 aa20.79■□□□□ 0.92
FAM239A-203ENST00000456563 RIOX1Q9H6W3 641 aa20.79■□□□□ 0.92
FAM239A-203ENST00000456563 CCDC196A0A1B0GTZ2 297 aa20.78■□□□□ 0.92
FAM239A-203ENST00000456563 GPR25O00155 361 aa20.78■□□□□ 0.92
FAM239A-203ENST00000456563 ATP2A1O14983 1001 aa20.78■□□□□ 0.92
FAM239A-203ENST00000456563 ST18O60284 1047 aa20.78■□□□□ 0.92
FAM239A-203ENST00000456563 HSPA1AP0DMV8 641 aaKnown RBP20.78■□□□□ 0.92
FAM239A-203ENST00000456563 HSPA1BP0DMV9 641 aaKnown RBP20.78■□□□□ 0.92
FAM239A-203ENST00000456563 CDC27P30260 824 aa20.78■□□□□ 0.92
FAM239A-203ENST00000456563 ERVK-9P63128 1117 aa20.78■□□□□ 0.92
FAM239A-203ENST00000456563 ERVK-24P63145 666 aa20.78■□□□□ 0.92
FAM239A-203ENST00000456563 TMEM132BQ14DG7 1078 aa20.78■□□□□ 0.92
FAM239A-203ENST00000456563 TMTC3Q6ZXV5 915 aa20.78■□□□□ 0.92
FAM239A-203ENST00000456563 NBPF11Q86T75 865 aa20.78■□□□□ 0.92
FAM239A-203ENST00000456563 ADGRF4Q8IZF3 695 aa20.78■□□□□ 0.92
FAM239A-203ENST00000456563 GPRC5AQ8NFJ5 357 aa20.78■□□□□ 0.92
FAM239A-203ENST00000456563 PAGR1Q9BTK6 254 aa20.78■□□□□ 0.92
FAM239A-203ENST00000456563 SPZ1Q9BXG8 430 aa20.78■□□□□ 0.92
FAM239A-203ENST00000456563 RANBP17Q9H2T7 1088 aaKnown RBP20.78■□□□□ 0.92
FAM239A-203ENST00000456563 A0A0G2JMZ2 1700 aa20.78■□□□□ 0.92
FAM239A-203ENST00000456563 CYTH3O43739 400 aa20.77■□□□□ 0.92
FAM239A-203ENST00000456563 PLEKHA8P1O95397 391 aa20.77■□□□□ 0.92
FAM239A-203ENST00000456563 OAZ1P54368 228 aa20.77■□□□□ 0.92
FAM239A-203ENST00000456563 SLC35G1Q2M3R5 365 aa20.77■□□□□ 0.92
FAM239A-203ENST00000456563 Q3C1V9 767 aa20.77■□□□□ 0.92
FAM239A-203ENST00000456563 SRBD1Q8N5C6 995 aaKnown RBP20.77■□□□□ 0.92
FAM239A-203ENST00000456563 MTMR8Q96EF0 704 aa20.77■□□□□ 0.92
FAM239A-203ENST00000456563 JMJD4Q9H9V9 463 aa20.77■□□□□ 0.92
FAM239A-203ENST00000456563 TSKSQ9UJT2 592 aa20.77■□□□□ 0.92
FAM239A-203ENST00000456563 ZNF214Q9UL59 606 aaPredicted RBP20.77■□□□□ 0.92
FAM239A-203ENST00000456563 LIMCH1Q9UPQ0 1083 aa20.77■□□□□ 0.92
FAM239A-203ENST00000456563 CTDP1Q9Y5B0 961 aaPredicted RBP20.77■□□□□ 0.92
FAM239A-203ENST00000456563 PEX10O60683 326 aa20.76■□□□□ 0.91
FAM239A-203ENST00000456563 PFKFB2O60825 505 aa20.76■□□□□ 0.91
FAM239A-203ENST00000456563 ADD1P35611 737 aaKnown RBP20.76■□□□□ 0.91
FAM239A-203ENST00000456563 SP3Q02447 781 aa20.76■□□□□ 0.91
FAM239A-203ENST00000456563 SPATC1LQ9H0A9 340 aa20.76■□□□□ 0.91
FAM239A-203ENST00000456563 FOXN1O15353 648 aa20.75■□□□□ 0.91
FAM239A-203ENST00000456563 DHX16O60231 1041 aaKnown RBP20.75■□□□□ 0.91
FAM239A-203ENST00000456563 SNAP25P60880 206 aa20.75■□□□□ 0.91
FAM239A-203ENST00000456563 CCT2P78371 535 aaKnown RBP20.75■□□□□ 0.91
FAM239A-203ENST00000456563 CCNA1P78396 465 aa20.75■□□□□ 0.91
FAM239A-203ENST00000456563 ME3Q16798 604 aa20.75■□□□□ 0.91
FAM239A-203ENST00000456563 NOL8Q76FK4 1167 aaKnown RBP20.75■□□□□ 0.91
FAM239A-203ENST00000456563 SLKQ9H2G2 1235 aaPredicted RBP20.75■□□□□ 0.91
FAM239A-203ENST00000456563 VAT1LQ9HCJ6 419 aa20.75■□□□□ 0.91
FAM239A-203ENST00000456563 ZNF536O15090 1300 aa20.75■□□□□ 0.91
FAM239A-203ENST00000456563 FKTNO75072 461 aa20.74■□□□□ 0.91
FAM239A-203ENST00000456563 HSPA8P11142 646 aaKnown RBP20.74■□□□□ 0.91
FAM239A-203ENST00000456563 STAT3P40763 770 aa20.74■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms